RNA–Protein interactions for RNA: ENST00000540301.1

KLHL42-203, Transcript of kelch like family member 42, humanhuman

TSL 3

Gene KLHL42, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL42-203ENST00000540301 GIT1Q9Y2X7 761 aa9.12□□□□□ -0.95
KLHL42-203ENST00000540301 RAI2Q9Y5P3 530 aa9.12□□□□□ -0.95
KLHL42-203ENST00000540301 CACNA1EQ15878 2313 aa9.12□□□□□ -0.95
KLHL42-203ENST00000540301 SHROOM3Q8TF72 1996 aa9.12□□□□□ -0.95
KLHL42-203ENST00000540301 ACACAQ13085 2346 aa9.11□□□□□ -0.95
KLHL42-203ENST00000540301 NCANO14594 1321 aa9.11□□□□□ -0.95
KLHL42-203ENST00000540301 ARHGEF37A1IGU5 675 aa9.11□□□□□ -0.95
KLHL42-203ENST00000540301 TMEM150BA6NC51 233 aa9.11□□□□□ -0.95
KLHL42-203ENST00000540301 MAFO75444 373 aaPredicted RBP9.11□□□□□ -0.95
KLHL42-203ENST00000540301 CYP3A4P08684 503 aa9.11□□□□□ -0.95
KLHL42-203ENST00000540301 SRGAP2CP0DJJ0 459 aa9.11□□□□□ -0.95
KLHL42-203ENST00000540301 GBP1P32455 592 aa9.11□□□□□ -0.95
KLHL42-203ENST00000540301 CCR2P41597 374 aa9.11□□□□□ -0.95
KLHL42-203ENST00000540301 NAPAP54920 295 aa9.11□□□□□ -0.95
KLHL42-203ENST00000540301 LMAN2Q12907 356 aa9.11□□□□□ -0.95
KLHL42-203ENST00000540301 KARSQ15046 597 aaKnown RBP9.11□□□□□ -0.95
KLHL42-203ENST00000540301 ZNF423Q2M1K9 1284 aa9.11□□□□□ -0.95
KLHL42-203ENST00000540301 XKR3Q5GH77 459 aa9.11□□□□□ -0.95
KLHL42-203ENST00000540301 CYP4A22Q5TCH4 519 aa9.11□□□□□ -0.95
KLHL42-203ENST00000540301 WWC2Q6AWC2 1192 aa9.11□□□□□ -0.95
KLHL42-203ENST00000540301 TYW1BQ6NUM6 668 aa9.11□□□□□ -0.95
KLHL42-203ENST00000540301 RAB44Q7Z6P3 723 aaPredicted RBP9.11□□□□□ -0.95
KLHL42-203ENST00000540301 HACE1Q8IYU2 909 aa9.11□□□□□ -0.95
KLHL42-203ENST00000540301 NCOA7Q8NI08 942 aa9.11□□□□□ -0.95
KLHL42-203ENST00000540301 MDM1Q8TC05 714 aa9.11□□□□□ -0.95
KLHL42-203ENST00000540301 E2F7Q96AV8 911 aa9.11□□□□□ -0.95
KLHL42-203ENST00000540301 PAAF1Q9BRP4 392 aa9.11□□□□□ -0.95
KLHL42-203ENST00000540301 MINDY3Q9H8M7 445 aa9.11□□□□□ -0.95
KLHL42-203ENST00000540301 TRPV4Q9HBA0 871 aa9.11□□□□□ -0.95
KLHL42-203ENST00000540301 MTRRQ9UBK8 725 aa9.11□□□□□ -0.95
KLHL42-203ENST00000540301 COL4A3BPQ9Y5P4 624 aa9.11□□□□□ -0.95
KLHL42-203ENST00000540301 CDY1Q9Y6F8 540 aa9.11□□□□□ -0.95
KLHL42-203ENST00000540301 LAMA1P25391 3075 aa9.11□□□□□ -0.95
KLHL42-203ENST00000540301 FREM2Q5SZK8 3169 aa9.1□□□□□ -0.95
KLHL42-203ENST00000540301 ABCA7Q8IZY2 2146 aa9.1□□□□□ -0.95
KLHL42-203ENST00000540301 URB1O60287 2271 aaKnown RBP9.1□□□□□ -0.95
KLHL42-203ENST00000540301 CCDC194A0A1B0GVG4 234 aa9.1□□□□□ -0.95
KLHL42-203ENST00000540301 SMCO2A6NFE2 343 aa9.1□□□□□ -0.95
KLHL42-203ENST00000540301 CASTOR2A6NHX0 329 aa9.1□□□□□ -0.95
KLHL42-203ENST00000540301 CHMP2AO43633 222 aa9.1□□□□□ -0.95
KLHL42-203ENST00000540301 ERLIN2O94905 339 aa9.1□□□□□ -0.95
KLHL42-203ENST00000540301 KIF4AO95239 1232 aa9.1□□□□□ -0.95
KLHL42-203ENST00000540301 RXRAP19793 462 aa9.1□□□□□ -0.95
KLHL42-203ENST00000540301 AKAP5P24588 427 aa9.1□□□□□ -0.95
KLHL42-203ENST00000540301 SFNP31947 248 aa9.1□□□□□ -0.95
KLHL42-203ENST00000540301 ELF1P32519 619 aa9.1□□□□□ -0.95
KLHL42-203ENST00000540301 MAPK8P45983 427 aa9.1□□□□□ -0.95
KLHL42-203ENST00000540301 CLK2P49760 499 aaKnown RBP9.1□□□□□ -0.95
KLHL42-203ENST00000540301 FCHO2Q0JRZ9 810 aa9.1□□□□□ -0.95
KLHL42-203ENST00000540301 ELAVL2Q12926 359 aaKnown RBP9.1□□□□□ -0.95
KLHL42-203ENST00000540301 TUSC3Q13454 348 aa9.1□□□□□ -0.95
KLHL42-203ENST00000540301 PRR16Q569H4 304 aa9.1□□□□□ -0.95
KLHL42-203ENST00000540301 NOTUMQ6P988 496 aa9.1□□□□□ -0.95
KLHL42-203ENST00000540301 PIP4P1Q86T03 277 aa9.1□□□□□ -0.95
KLHL42-203ENST00000540301 CCDC51Q96ER9 411 aa9.1□□□□□ -0.95
KLHL42-203ENST00000540301 HHIPQ96QV1 700 aa9.1□□□□□ -0.95
KLHL42-203ENST00000540301 HNRNPABQ99729 332 aaKnown RBP9.1□□□□□ -0.95
KLHL42-203ENST00000540301 JPH2Q9BR39 696 aaPredicted RBP9.1□□□□□ -0.95
KLHL42-203ENST00000540301 TRIM6Q9C030 488 aaPredicted RBP9.1□□□□□ -0.95
KLHL42-203ENST00000540301 GTSE1Q9NYZ3 720 aa9.1□□□□□ -0.95
KLHL42-203ENST00000540301 KLK14Q9P0G3 267 aa9.1□□□□□ -0.95
KLHL42-203ENST00000540301 BPTFQ12830 3046 aa9.1□□□□□ -0.95
KLHL42-203ENST00000540301 ATG2BQ96BY7 2078 aa9.09□□□□□ -0.95
KLHL42-203ENST00000540301 VWA8A3KMH1 1905 aa9.09□□□□□ -0.95
KLHL42-203ENST00000540301 DDX11L8A8MPP1 907 aa9.09□□□□□ -0.95
KLHL42-203ENST00000540301 UPK3BL1B0FP48 263 aa9.09□□□□□ -0.95
KLHL42-203ENST00000540301 UPK3BL2E5RIL1 263 aa9.09□□□□□ -0.95
KLHL42-203ENST00000540301 CCER2I3L3R5 266 aa9.09□□□□□ -0.95
KLHL42-203ENST00000540301 J3QKU1 62 aa9.09□□□□□ -0.95
KLHL42-203ENST00000540301 PRRG1O14668 218 aa9.09□□□□□ -0.95
KLHL42-203ENST00000540301 MOSPD3O75425 235 aa9.09□□□□□ -0.95
KLHL42-203ENST00000540301 STBD1O95210 358 aa9.09□□□□□ -0.95
KLHL42-203ENST00000540301 CYP21A2P08686 494 aa9.09□□□□□ -0.95
KLHL42-203ENST00000540301 CALM1P0DP23 149 aa9.09□□□□□ -0.95
KLHL42-203ENST00000540301 CALM2P0DP24 149 aa9.09□□□□□ -0.95
KLHL42-203ENST00000540301 CALM3P0DP25 149 aa9.09□□□□□ -0.95
KLHL42-203ENST00000540301 GJA1P17302 382 aa9.09□□□□□ -0.95
KLHL42-203ENST00000540301 AXLP30530 894 aa9.09□□□□□ -0.95
KLHL42-203ENST00000540301 JAK3P52333 1124 aa9.09□□□□□ -0.95
KLHL42-203ENST00000540301 ANTXR2P58335 489 aa9.09□□□□□ -0.95
KLHL42-203ENST00000540301 FAM193AP78312 1265 aa9.09□□□□□ -0.95
KLHL42-203ENST00000540301 HNRNPUQ00839 825 aaKnown RBP eCLIP9.09□□□□□ -0.95
KLHL42-203ENST00000540301 NCBP1Q09161 790 aaKnown RBP9.09□□□□□ -0.95
KLHL42-203ENST00000540301 SEMA3BQ13214 749 aa9.09□□□□□ -0.95
KLHL42-203ENST00000540301 TRIM61Q5EBN2 209 aa9.09□□□□□ -0.95
KLHL42-203ENST00000540301 JAKMIP3Q5VZ66 844 aa9.09□□□□□ -0.95
KLHL42-203ENST00000540301 PMS2CLQ68D20 193 aa9.09□□□□□ -0.95
KLHL42-203ENST00000540301 IQCEQ6IPM2 695 aa9.09□□□□□ -0.95
KLHL42-203ENST00000540301 PPP1R18Q6NYC8 613 aa9.09□□□□□ -0.95
KLHL42-203ENST00000540301 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.09□□□□□ -0.95
KLHL42-203ENST00000540301 CCNI2Q6ZMN8 369 aaPredicted RBP9.09□□□□□ -0.95
KLHL42-203ENST00000540301 NFXL1Q6ZNB6 911 aa9.09□□□□□ -0.95
KLHL42-203ENST00000540301 CYP2U1Q7Z449 544 aa9.09□□□□□ -0.95
KLHL42-203ENST00000540301 ZNF461Q8TAF7 563 aa9.09□□□□□ -0.95
KLHL42-203ENST00000540301 PRPF31Q8WWY3 499 aaKnown RBP9.09□□□□□ -0.95
KLHL42-203ENST00000540301 CRYGNQ8WXF5 182 aa9.09□□□□□ -0.95
KLHL42-203ENST00000540301 RSPRY1Q96DX4 576 aa9.09□□□□□ -0.95
KLHL42-203ENST00000540301 CRELD1Q96HD1 420 aa9.09□□□□□ -0.95
KLHL42-203ENST00000540301 CPB2Q96IY4 423 aa9.09□□□□□ -0.95
KLHL42-203ENST00000540301 TMEM209Q96SK2 561 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms