RNA–Protein interactions for RNA: ENST00000540103.1

NPIPB4-212, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 5

Gene NPIPB4, Length 631 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-212ENST00000540103 HAPLN2Q9GZV7 340 aa8.78□□□□□ -1
NPIPB4-212ENST00000540103 CDT1Q9H211 546 aa8.78□□□□□ -1
NPIPB4-212ENST00000540103 KCNK12Q9HB15 430 aa8.78□□□□□ -1
NPIPB4-212ENST00000540103 ZDHHC7Q9NXF8 308 aa8.78□□□□□ -1
NPIPB4-212ENST00000540103 EPS15L1Q9UBC2 864 aa8.78□□□□□ -1
NPIPB4-212ENST00000540103 GDAQ9Y2T3 454 aa8.78□□□□□ -1
NPIPB4-212ENST00000540103 MYH11P35749 1972 aa8.77□□□□□ -1
NPIPB4-212ENST00000540103 CITO14578 2027 aa8.77□□□□□ -1.01
NPIPB4-212ENST00000540103 ZMYND10O75800 440 aa8.77□□□□□ -1.01
NPIPB4-212ENST00000540103 KCNE1P15382 129 aa8.77□□□□□ -1.01
NPIPB4-212ENST00000540103 LIG1P18858 919 aa8.77□□□□□ -1.01
NPIPB4-212ENST00000540103 MRE11P49959 708 aa8.77□□□□□ -1.01
NPIPB4-212ENST00000540103 CLCNKBP51801 687 aa8.77□□□□□ -1.01
NPIPB4-212ENST00000540103 TDGQ13569 410 aa8.77□□□□□ -1.01
NPIPB4-212ENST00000540103 MTMR3Q13615 1198 aa8.77□□□□□ -1.01
NPIPB4-212ENST00000540103 RAB33AQ14088 237 aa8.77□□□□□ -1.01
NPIPB4-212ENST00000540103 TMEM119Q4V9L6 283 aa8.77□□□□□ -1.01
NPIPB4-212ENST00000540103 KRT79Q5XKE5 535 aa8.77□□□□□ -1.01
NPIPB4-212ENST00000540103 ARL6IP4Q66PJ3 421 aaKnown RBP8.77□□□□□ -1.01
NPIPB4-212ENST00000540103 DCLRE1AQ6PJP8 1040 aa8.77□□□□□ -1.01
NPIPB4-212ENST00000540103 CCDC149Q6ZUS6 474 aa8.77□□□□□ -1.01
NPIPB4-212ENST00000540103 KCTD17Q8N5Z5 321 aa8.77□□□□□ -1.01
NPIPB4-212ENST00000540103 TMEM105Q8N8V8 129 aa8.77□□□□□ -1.01
NPIPB4-212ENST00000540103 TMEM161BQ8NDZ6 487 aa8.77□□□□□ -1.01
NPIPB4-212ENST00000540103 HASPINQ8TF76 798 aa8.77□□□□□ -1.01
NPIPB4-212ENST00000540103 SPIRE2Q8WWL2 714 aa8.77□□□□□ -1.01
NPIPB4-212ENST00000540103 ADPGKQ9BRR6 497 aa8.77□□□□□ -1.01
NPIPB4-212ENST00000540103 TTPALQ9BTX7 342 aa8.77□□□□□ -1.01
NPIPB4-212ENST00000540103 C17orf75Q9HAS0 396 aa8.77□□□□□ -1.01
NPIPB4-212ENST00000540103 BLOC1S4Q9NUP1 217 aa8.77□□□□□ -1.01
NPIPB4-212ENST00000540103 FBXW11Q9UKB1 542 aa8.77□□□□□ -1.01
NPIPB4-212ENST00000540103 DUSP12Q9UNI6 340 aa8.77□□□□□ -1.01
NPIPB4-212ENST00000540103 SF3B1O75533 1304 aaKnown RBP eCLIP8.77□□□□□ -1.01
NPIPB4-212ENST00000540103 CCDC169A6NNP5 214 aa8.76□□□□□ -1.01
NPIPB4-212ENST00000540103 ANHXE9PGG2 379 aa8.76□□□□□ -1.01
NPIPB4-212ENST00000540103 SLC16A4O15374 487 aa8.76□□□□□ -1.01
NPIPB4-212ENST00000540103 PI15O43692 258 aa8.76□□□□□ -1.01
NPIPB4-212ENST00000540103 YEATS4O95619 227 aa8.76□□□□□ -1.01
NPIPB4-212ENST00000540103 LAMP2P13473 410 aa8.76□□□□□ -1.01
NPIPB4-212ENST00000540103 BRCC3P46736 316 aa8.76□□□□□ -1.01
NPIPB4-212ENST00000540103 ME1P48163 572 aa8.76□□□□□ -1.01
NPIPB4-212ENST00000540103 CLCN5P51795 746 aa8.76□□□□□ -1.01
NPIPB4-212ENST00000540103 NUBP1P53384 320 aa8.76□□□□□ -1.01
NPIPB4-212ENST00000540103 GRIN1Q05586 938 aa8.76□□□□□ -1.01
NPIPB4-212ENST00000540103 MRPL58Q14197 206 aaKnown RBP8.76□□□□□ -1.01
NPIPB4-212ENST00000540103 ZBTB6Q15916 424 aa8.76□□□□□ -1.01
NPIPB4-212ENST00000540103 PSMD5Q16401 504 aa8.76□□□□□ -1.01
NPIPB4-212ENST00000540103 SLC10A6Q3KNW5 377 aa8.76□□□□□ -1.01
NPIPB4-212ENST00000540103 GLRA4Q5JXX5 417 aa8.76□□□□□ -1.01
NPIPB4-212ENST00000540103 CWF19L1Q69YN2 538 aaKnown RBP8.76□□□□□ -1.01
NPIPB4-212ENST00000540103 FAM173BQ6P4H8 233 aa8.76□□□□□ -1.01
NPIPB4-212ENST00000540103 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.76□□□□□ -1.01
NPIPB4-212ENST00000540103 CLEC17AQ6ZS10 378 aa8.76□□□□□ -1.01
NPIPB4-212ENST00000540103 GLYCTKQ8IVS8 523 aa8.76□□□□□ -1.01
NPIPB4-212ENST00000540103 SUGP1Q8IWZ8 645 aaKnown RBP8.76□□□□□ -1.01
NPIPB4-212ENST00000540103 SLC44A3Q8N4M1 653 aa8.76□□□□□ -1.01
NPIPB4-212ENST00000540103 RSAD2Q8WXG1 361 aa8.76□□□□□ -1.01
NPIPB4-212ENST00000540103 SMG7Q92540 1137 aaKnown RBP8.76□□□□□ -1.01
NPIPB4-212ENST00000540103 ACSF2Q96CM8 615 aaPredicted RBP8.76□□□□□ -1.01
NPIPB4-212ENST00000540103 FIZ1Q96SL8 496 aa8.76□□□□□ -1.01
NPIPB4-212ENST00000540103 PRRX2Q99811 253 aa8.76□□□□□ -1.01
NPIPB4-212ENST00000540103 TIPINQ9BVW5 301 aa8.76□□□□□ -1.01
NPIPB4-212ENST00000540103 MRPL4Q9BYD3 311 aaKnown RBP8.76□□□□□ -1.01
NPIPB4-212ENST00000540103 RAB34Q9BZG1 259 aa8.76□□□□□ -1.01
NPIPB4-212ENST00000540103 GOLGA2P5Q9HBQ8 144 aa8.76□□□□□ -1.01
NPIPB4-212ENST00000540103 KMT5AQ9NQR1 393 aa8.76□□□□□ -1.01
NPIPB4-212ENST00000540103 IGSF9Q9P2J2 1179 aa8.76□□□□□ -1.01
NPIPB4-212ENST00000540103 TFIP11Q9UBB9 837 aaKnown RBP8.76□□□□□ -1.01
NPIPB4-212ENST00000540103 MTRRQ9UBK8 725 aa8.76□□□□□ -1.01
NPIPB4-212ENST00000540103 DPP7Q9UHL4 492 aa8.76□□□□□ -1.01
NPIPB4-212ENST00000540103 PDCD11Q14690 1871 aaKnown RBP8.76□□□□□ -1.01
NPIPB4-212ENST00000540103 CLUHO75153 1309 aa8.76□□□□□ -1.01
NPIPB4-212ENST00000540103 PHLPP2Q6ZVD8 1323 aa8.76□□□□□ -1.01
NPIPB4-212ENST00000540103 NPHP3-ACAD11A0A0J9YXS1 232 aa8.75□□□□□ -1.01
NPIPB4-212ENST00000540103 KRBA1A5PL33 1030 aa8.75□□□□□ -1.01
NPIPB4-212ENST00000540103 SPTLC2O15270 562 aa8.75□□□□□ -1.01
NPIPB4-212ENST00000540103 NARSO43776 548 aaKnown RBP8.75□□□□□ -1.01
NPIPB4-212ENST00000540103 B3GAT3O94766 335 aa8.75□□□□□ -1.01
NPIPB4-212ENST00000540103 ADRB2P07550 413 aa8.75□□□□□ -1.01
NPIPB4-212ENST00000540103 POU2F2P09086 479 aa8.75□□□□□ -1.01
NPIPB4-212ENST00000540103 PLA2G4BP0C869 781 aa8.75□□□□□ -1.01
NPIPB4-212ENST00000540103 MAPTP10636 758 aaKnown RBP8.75□□□□□ -1.01
NPIPB4-212ENST00000540103 MCF2P10911 925 aa8.75□□□□□ -1.01
NPIPB4-212ENST00000540103 PLS3P13797 630 aa8.75□□□□□ -1.01
NPIPB4-212ENST00000540103 TKTP29401 623 aaKnown RBP8.75□□□□□ -1.01
NPIPB4-212ENST00000540103 HOXA9P31269 272 aa8.75□□□□□ -1.01
NPIPB4-212ENST00000540103 PTPN5P54829 565 aa8.75□□□□□ -1.01
NPIPB4-212ENST00000540103 ELAVL2Q12926 359 aaKnown RBP8.75□□□□□ -1.01
NPIPB4-212ENST00000540103 UVSSAQ2YD98 709 aa8.75□□□□□ -1.01
NPIPB4-212ENST00000540103 ASTLQ6HA08 431 aaPredicted RBP8.75□□□□□ -1.01
NPIPB4-212ENST00000540103 ZBTB33Q86T24 672 aa8.75□□□□□ -1.01
NPIPB4-212ENST00000540103 CEP57Q86XR8 500 aa8.75□□□□□ -1.01
NPIPB4-212ENST00000540103 TMEM130Q8N3G9 435 aa8.75□□□□□ -1.01
NPIPB4-212ENST00000540103 NXPE3Q969Y0 559 aa8.75□□□□□ -1.01
NPIPB4-212ENST00000540103 DDX27Q96GQ7 796 aaKnown RBP8.75□□□□□ -1.01
NPIPB4-212ENST00000540103 SNX27Q96L92 541 aa8.75□□□□□ -1.01
NPIPB4-212ENST00000540103 DRC1Q96MC2 740 aa8.75□□□□□ -1.01
NPIPB4-212ENST00000540103 ACAP3Q96P50 834 aa8.75□□□□□ -1.01
NPIPB4-212ENST00000540103 USP28Q96RU2 1077 aa8.75□□□□□ -1.01
NPIPB4-212ENST00000540103 PLIN2Q99541 437 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms