RNA–Protein interactions for RNA: ENST00000539552.1

AC055720.1-201, humanhuman

TSL 5 BASIC

Gene AC055720.1, Length 475 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.1-201ENST00000539552 TRAF6Q9Y4K3 522 aa4.37□□□□□ -1.71
AC055720.1-201ENST00000539552 PCDHGA9Q9Y5G4 932 aaKnown RBP4.37□□□□□ -1.71
AC055720.1-201ENST00000539552 PCDHGA8Q9Y5G5 932 aa4.37□□□□□ -1.71
AC055720.1-201ENST00000539552 PCDHGA7Q9Y5G6 932 aa4.37□□□□□ -1.71
AC055720.1-201ENST00000539552 PCDHGA6Q9Y5G7 932 aa4.37□□□□□ -1.71
AC055720.1-201ENST00000539552 PCDHGA3Q9Y5H0 932 aa4.37□□□□□ -1.71
AC055720.1-201ENST00000539552 PCDHGA2Q9Y5H1 932 aa4.37□□□□□ -1.71
AC055720.1-201ENST00000539552 MAGED1Q9Y5V3 778 aaPredicted RBP4.37□□□□□ -1.71
AC055720.1-201ENST00000539552 CFAP47Q6ZTR5 3102 aa4.37□□□□□ -1.71
AC055720.1-201ENST00000539552 ZNF536O15090 1300 aa4.37□□□□□ -1.71
AC055720.1-201ENST00000539552 KMT2BQ9UMN6 2715 aaPredicted RBP4.37□□□□□ -1.71
AC055720.1-201ENST00000539552 A0A1W2PQ45 241 aaPredicted RBP4.36□□□□□ -1.71
AC055720.1-201ENST00000539552 A0A1W2PQY0 241 aa4.36□□□□□ -1.71
AC055720.1-201ENST00000539552 KLHL33A6NCF5 533 aa4.36□□□□□ -1.71
AC055720.1-201ENST00000539552 SMTNL1A8MU46 457 aa4.36□□□□□ -1.71
AC055720.1-201ENST00000539552 GOLGA6L6A8MZA4 724 aa4.36□□□□□ -1.71
AC055720.1-201ENST00000539552 XPOTO43592 962 aaKnown RBP4.36□□□□□ -1.71
AC055720.1-201ENST00000539552 MYO1BO43795 1136 aa4.36□□□□□ -1.71
AC055720.1-201ENST00000539552 IGHDP01880 384 aa4.36□□□□□ -1.71
AC055720.1-201ENST00000539552 SLPIP03973 132 aa4.36□□□□□ -1.71
AC055720.1-201ENST00000539552 ELF1P32519 619 aa4.36□□□□□ -1.71
AC055720.1-201ENST00000539552 SEPHS1P49903 392 aa4.36□□□□□ -1.71
AC055720.1-201ENST00000539552 ZNF445P59923 1031 aa4.36□□□□□ -1.71
AC055720.1-201ENST00000539552 ACAP2Q15057 778 aa4.36□□□□□ -1.71
AC055720.1-201ENST00000539552 ZNF174Q15697 407 aa4.36□□□□□ -1.71
AC055720.1-201ENST00000539552 DPY19L1Q2PZI1 675 aa4.36□□□□□ -1.71
AC055720.1-201ENST00000539552 VWA3BQ502W6 1294 aa4.36□□□□□ -1.71
AC055720.1-201ENST00000539552 ATAT1Q5SQI0 421 aa4.36□□□□□ -1.71
AC055720.1-201ENST00000539552 FKBP15Q5T1M5 1219 aa4.36□□□□□ -1.71
AC055720.1-201ENST00000539552 GPATCH4Q5T3I0 446 aaKnown RBP4.36□□□□□ -1.71
AC055720.1-201ENST00000539552 ITPRIPL1Q6GPH6 555 aa4.36□□□□□ -1.71
AC055720.1-201ENST00000539552 HIBCHQ6NVY1 386 aaPredicted RBP4.36□□□□□ -1.71
AC055720.1-201ENST00000539552 GLB1LQ6UWU2 654 aa4.36□□□□□ -1.71
AC055720.1-201ENST00000539552 CCDC129Q6ZRS4 1044 aa4.36□□□□□ -1.71
AC055720.1-201ENST00000539552 TTLL7Q6ZT98 887 aa4.36□□□□□ -1.71
AC055720.1-201ENST00000539552 PDZD4Q76G19 769 aaPredicted RBP4.36□□□□□ -1.71
AC055720.1-201ENST00000539552 OVCH2Q7RTZ1 564 aa4.36□□□□□ -1.71
AC055720.1-201ENST00000539552 UBE2Q1Q7Z7E8 422 aa4.36□□□□□ -1.71
AC055720.1-201ENST00000539552 FAM124AQ86V42 546 aa4.36□□□□□ -1.71
AC055720.1-201ENST00000539552 LCA5Q86VQ0 697 aa4.36□□□□□ -1.71
AC055720.1-201ENST00000539552 PTRH1Q86Y79 214 aaKnown RBP4.36□□□□□ -1.71
AC055720.1-201ENST00000539552 CARFQ8N187 725 aa4.36□□□□□ -1.71
AC055720.1-201ENST00000539552 NXPE1Q8N323 547 aa4.36□□□□□ -1.71
AC055720.1-201ENST00000539552 ZNF713Q8N859 430 aaPredicted RBP4.36□□□□□ -1.71
AC055720.1-201ENST00000539552 C2orf69Q8N8R5 385 aa4.36□□□□□ -1.71
AC055720.1-201ENST00000539552 IGSF22Q8N9C0 903 aa4.36□□□□□ -1.71
AC055720.1-201ENST00000539552 LSM14AQ8ND56 463 aaKnown RBP4.36□□□□□ -1.71
AC055720.1-201ENST00000539552 SLC30A5Q8TAD4 765 aa4.36□□□□□ -1.71
AC055720.1-201ENST00000539552 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.36□□□□□ -1.71
AC055720.1-201ENST00000539552 DIS3LQ8TF46 1054 aaKnown RBP4.36□□□□□ -1.71
AC055720.1-201ENST00000539552 DIO2Q92813 273 aa4.36□□□□□ -1.71
AC055720.1-201ENST00000539552 ATP6V1E2Q96A05 226 aa4.36□□□□□ -1.71
AC055720.1-201ENST00000539552 FERMT2Q96AC1 680 aa4.36□□□□□ -1.71
AC055720.1-201ENST00000539552 HVCN1Q96D96 273 aa4.36□□□□□ -1.71
AC055720.1-201ENST00000539552 ZMAT2Q96NC0 199 aaKnown RBP4.36□□□□□ -1.71
AC055720.1-201ENST00000539552 CDK5RAP1Q96SZ6 601 aaKnown RBP4.36□□□□□ -1.71
AC055720.1-201ENST00000539552 RMDN3Q96TC7 470 aa4.36□□□□□ -1.71
AC055720.1-201ENST00000539552 ACO2Q99798 780 aaKnown RBP4.36□□□□□ -1.71
AC055720.1-201ENST00000539552 PHF20Q9BVI0 1012 aa4.36□□□□□ -1.71
AC055720.1-201ENST00000539552 CDADC1Q9BWV3 514 aa4.36□□□□□ -1.71
AC055720.1-201ENST00000539552 TMEM60Q9H2L4 133 aa4.36□□□□□ -1.71
AC055720.1-201ENST00000539552 PLEKHA5Q9HAU0 1116 aa4.36□□□□□ -1.71
AC055720.1-201ENST00000539552 TNFRSF12AQ9NP84 129 aa4.36□□□□□ -1.71
AC055720.1-201ENST00000539552 C14orf119Q9NWQ9 140 aa4.36□□□□□ -1.71
AC055720.1-201ENST00000539552 GPRC5BQ9NZH0 403 aa4.36□□□□□ -1.71
AC055720.1-201ENST00000539552 POLHQ9Y253 713 aa4.36□□□□□ -1.71
AC055720.1-201ENST00000539552 INVSQ9Y283 1065 aa4.36□□□□□ -1.71
AC055720.1-201ENST00000539552 PCDHGB6Q9Y5F9 930 aa4.36□□□□□ -1.71
AC055720.1-201ENST00000539552 PCDHA8Q9Y5H6 950 aa4.36□□□□□ -1.71
AC055720.1-201ENST00000539552 DUSP10Q9Y6W6 482 aa4.36□□□□□ -1.71
AC055720.1-201ENST00000539552 PRAG1Q86YV5 1406 aa4.36□□□□□ -1.71
AC055720.1-201ENST00000539552 BDP1A6H8Y1 2624 aa4.36□□□□□ -1.71
AC055720.1-201ENST00000539552 TRBV23OR9-2A0A075B6M9 112 aa4.35□□□□□ -1.71
AC055720.1-201ENST00000539552 A0A087WV62 115 aa4.35□□□□□ -1.71
AC055720.1-201ENST00000539552 TMEM82A0PJX8 343 aa4.35□□□□□ -1.71
AC055720.1-201ENST00000539552 SH3D21A4FU49 640 aa4.35□□□□□ -1.71
AC055720.1-201ENST00000539552 FADS2P1A8MWK0 482 aa4.35□□□□□ -1.71
AC055720.1-201ENST00000539552 B4E171 279 aa4.35□□□□□ -1.71
AC055720.1-201ENST00000539552 H7C1D1 291 aa4.35□□□□□ -1.71
AC055720.1-201ENST00000539552 CHL1O00533 1208 aa4.35□□□□□ -1.71
AC055720.1-201ENST00000539552 INMTO95050 263 aa4.35□□□□□ -1.71
AC055720.1-201ENST00000539552 BAG2O95816 211 aa4.35□□□□□ -1.71
AC055720.1-201ENST00000539552 PLATP00750 562 aa4.35□□□□□ -1.71
AC055720.1-201ENST00000539552 SCG5P05408 212 aa4.35□□□□□ -1.71
AC055720.1-201ENST00000539552 GSNP06396 782 aa4.35□□□□□ -1.71
AC055720.1-201ENST00000539552 SRGAP2CP0DJJ0 459 aa4.35□□□□□ -1.71
AC055720.1-201ENST00000539552 XPAP23025 273 aaPredicted RBP4.35□□□□□ -1.71
AC055720.1-201ENST00000539552 IGFBP6P24592 240 aaPredicted RBP4.35□□□□□ -1.71
AC055720.1-201ENST00000539552 GRK2P25098 689 aa4.35□□□□□ -1.71
AC055720.1-201ENST00000539552 SMARCA1P28370 1054 aa4.35□□□□□ -1.71
AC055720.1-201ENST00000539552 KRT9P35527 623 aa4.35□□□□□ -1.71
AC055720.1-201ENST00000539552 LTBRP36941 435 aa4.35□□□□□ -1.71
AC055720.1-201ENST00000539552 PEX19P40855 299 aa4.35□□□□□ -1.71
AC055720.1-201ENST00000539552 DNM2P50570 870 aa4.35□□□□□ -1.71
AC055720.1-201ENST00000539552 ZNF131P52739 623 aa4.35□□□□□ -1.71
AC055720.1-201ENST00000539552 CLNS1AP54105 237 aaKnown RBP4.35□□□□□ -1.71
AC055720.1-201ENST00000539552 NAP1L1P55209 391 aaKnown RBP4.35□□□□□ -1.71
AC055720.1-201ENST00000539552 SNX16P57768 344 aa4.35□□□□□ -1.71
AC055720.1-201ENST00000539552 PSMC1P62191 440 aaKnown RBP4.35□□□□□ -1.71
AC055720.1-201ENST00000539552 PLIN5Q00G26 463 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms