RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 PTPAQ15257 358 aa20.86■□□□□ 0.93
TNFRSF1A-212ENST00000539372 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.86■□□□□ 0.93
TNFRSF1A-212ENST00000539372 MYCT1Q8N699 235 aa20.86■□□□□ 0.93
TNFRSF1A-212ENST00000539372 BICD1Q96G01 975 aa20.86■□□□□ 0.93
TNFRSF1A-212ENST00000539372 PIDD1Q9HB75 910 aa20.86■□□□□ 0.93
TNFRSF1A-212ENST00000539372 WDR6Q9NNW5 1121 aaKnown RBP20.86■□□□□ 0.93
TNFRSF1A-212ENST00000539372 ODF2LQ9ULJ1 636 aa20.86■□□□□ 0.93
TNFRSF1A-212ENST00000539372 MYH11P35749 1972 aa20.85■□□□□ 0.93
TNFRSF1A-212ENST00000539372 TRIP11Q15643 1979 aa20.85■□□□□ 0.93
TNFRSF1A-212ENST00000539372 TMEM189-UBE2V1I3L0A0 370 aa20.85■□□□□ 0.93
TNFRSF1A-212ENST00000539372 FAM13AO94988 1023 aa20.85■□□□□ 0.93
TNFRSF1A-212ENST00000539372 C1RP00736 705 aa20.85■□□□□ 0.93
TNFRSF1A-212ENST00000539372 KRT18P05783 430 aaKnown RBP20.85■□□□□ 0.93
TNFRSF1A-212ENST00000539372 FGFR3P22607 806 aa20.85■□□□□ 0.93
TNFRSF1A-212ENST00000539372 TKTP29401 623 aaKnown RBP20.85■□□□□ 0.93
TNFRSF1A-212ENST00000539372 BRCC3P46736 316 aa20.85■□□□□ 0.93
TNFRSF1A-212ENST00000539372 NCKAP1LP55160 1127 aa20.85■□□□□ 0.93
TNFRSF1A-212ENST00000539372 CEBPZQ03701 1054 aaKnown RBP20.85■□□□□ 0.93
TNFRSF1A-212ENST00000539372 USP49Q70CQ1 688 aa20.85■□□□□ 0.93
TNFRSF1A-212ENST00000539372 HAUS6Q7Z4H7 955 aa20.85■□□□□ 0.93
TNFRSF1A-212ENST00000539372 SUGP1Q8IWZ8 645 aaKnown RBP20.85■□□□□ 0.93
TNFRSF1A-212ENST00000539372 C18orf25Q96B23 403 aaPredicted RBP20.85■□□□□ 0.93
TNFRSF1A-212ENST00000539372 EPSTI1Q96J88 318 aa20.85■□□□□ 0.93
TNFRSF1A-212ENST00000539372 ZHX3Q9H4I2 956 aa20.85■□□□□ 0.93
TNFRSF1A-212ENST00000539372 SLC38A7Q9NVC3 462 aa20.85■□□□□ 0.93
TNFRSF1A-212ENST00000539372 ZDHHC7Q9NXF8 308 aa20.85■□□□□ 0.93
TNFRSF1A-212ENST00000539372 CNTN3Q9P232 1028 aa20.85■□□□□ 0.93
TNFRSF1A-212ENST00000539372 FBXW11Q9UKB1 542 aa20.85■□□□□ 0.93
TNFRSF1A-212ENST00000539372 CLUHO75153 1309 aa20.84■□□□□ 0.93
TNFRSF1A-212ENST00000539372 H0YCG3 227 aa20.84■□□□□ 0.93
TNFRSF1A-212ENST00000539372 K7ENM7 598 aa20.84■□□□□ 0.93
TNFRSF1A-212ENST00000539372 PODXLO00592 558 aa20.84■□□□□ 0.93
TNFRSF1A-212ENST00000539372 CLDN3O15551 220 aa20.84■□□□□ 0.93
TNFRSF1A-212ENST00000539372 N4BP1O75113 896 aaKnown RBP20.84■□□□□ 0.93
TNFRSF1A-212ENST00000539372 KCNE1P15382 129 aa20.84■□□□□ 0.93
TNFRSF1A-212ENST00000539372 GBP2P32456 591 aaPredicted RBP20.84■□□□□ 0.93
TNFRSF1A-212ENST00000539372 PDXDC1Q6P996 788 aa20.84■□□□□ 0.93
TNFRSF1A-212ENST00000539372 CYP26C1Q6V0L0 522 aa20.84■□□□□ 0.93
TNFRSF1A-212ENST00000539372 ZPBP2Q6X784 338 aa20.84■□□□□ 0.93
TNFRSF1A-212ENST00000539372 UBALD2Q8IYN6 164 aa20.84■□□□□ 0.93
TNFRSF1A-212ENST00000539372 FBXL6Q8N531 539 aa20.84■□□□□ 0.93
TNFRSF1A-212ENST00000539372 DDX27Q96GQ7 796 aaKnown RBP20.84■□□□□ 0.93
TNFRSF1A-212ENST00000539372 INTS4Q96HW7 963 aaKnown RBP20.84■□□□□ 0.93
TNFRSF1A-212ENST00000539372 CLIC6Q96NY7 704 aa20.84■□□□□ 0.93
TNFRSF1A-212ENST00000539372 HAPLN2Q9GZV7 340 aa20.84■□□□□ 0.93
TNFRSF1A-212ENST00000539372 PARVGQ9HBI0 331 aa20.84■□□□□ 0.93
TNFRSF1A-212ENST00000539372 FBXO2Q9UK22 296 aaPredicted RBP20.84■□□□□ 0.93
TNFRSF1A-212ENST00000539372 VWA8A3KMH1 1905 aa20.83■□□□□ 0.93
TNFRSF1A-212ENST00000539372 MYO10Q9HD67 2058 aa20.83■□□□□ 0.93
TNFRSF1A-212ENST00000539372 K7ELQ4 463 aaPredicted RBP20.83■□□□□ 0.93
TNFRSF1A-212ENST00000539372 ZMYND10O75800 440 aa20.83■□□□□ 0.93
TNFRSF1A-212ENST00000539372 PDGFBP01127 241 aaPredicted RBP20.83■□□□□ 0.93
TNFRSF1A-212ENST00000539372 MCL1Q07820 350 aa20.83■□□□□ 0.93
TNFRSF1A-212ENST00000539372 SLC10A6Q3KNW5 377 aa20.83■□□□□ 0.93
TNFRSF1A-212ENST00000539372 LARP4BQ92615 738 aaKnown RBP20.83■□□□□ 0.93
TNFRSF1A-212ENST00000539372 STAMQ92783 540 aa20.83■□□□□ 0.93
TNFRSF1A-212ENST00000539372 RHOBTB2Q9BYZ6 727 aa20.83■□□□□ 0.93
TNFRSF1A-212ENST00000539372 PRKD2Q9BZL6 878 aa20.83■□□□□ 0.93
TNFRSF1A-212ENST00000539372 CCSER1Q9C0I3 900 aa20.83■□□□□ 0.93
TNFRSF1A-212ENST00000539372 TBX20Q9UMR3 447 aa20.83■□□□□ 0.93
TNFRSF1A-212ENST00000539372 MTMR6Q9Y217 621 aa20.83■□□□□ 0.93
TNFRSF1A-212ENST00000539372 TRAPPC3O43617 180 aa20.82■□□□□ 0.92
TNFRSF1A-212ENST00000539372 TBCAO75347 108 aaKnown RBP20.82■□□□□ 0.92
TNFRSF1A-212ENST00000539372 CXCL8P10145 99 aa20.82■□□□□ 0.92
TNFRSF1A-212ENST00000539372 OR1D2P34982 312 aa20.82■□□□□ 0.92
TNFRSF1A-212ENST00000539372 LIG4P49917 911 aa20.82■□□□□ 0.92
TNFRSF1A-212ENST00000539372 ZNF131P52739 623 aa20.82■□□□□ 0.92
TNFRSF1A-212ENST00000539372 IER5LQ5T953 404 aa20.82■□□□□ 0.92
TNFRSF1A-212ENST00000539372 LIN9Q5TKA1 542 aa20.82■□□□□ 0.92
TNFRSF1A-212ENST00000539372 RSPO2Q6UXX9 243 aaPredicted RBP20.82■□□□□ 0.92
TNFRSF1A-212ENST00000539372 TMEM130Q8N3G9 435 aa20.82■□□□□ 0.92
TNFRSF1A-212ENST00000539372 MYADMQ96S97 322 aa20.82■□□□□ 0.92
TNFRSF1A-212ENST00000539372 MTRRQ9UBK8 725 aa20.82■□□□□ 0.92
TNFRSF1A-212ENST00000539372 MTCL1Q9Y4B5 1905 aaKnown RBP20.81■□□□□ 0.92
TNFRSF1A-212ENST00000539372 HNRNPDLO14979 420 aaKnown RBP20.81■□□□□ 0.92
TNFRSF1A-212ENST00000539372 TRAK2O60296 914 aa20.81■□□□□ 0.92
TNFRSF1A-212ENST00000539372 PAPLNO95428 1278 aa20.81■□□□□ 0.92
TNFRSF1A-212ENST00000539372 C8AP07357 584 aa20.81■□□□□ 0.92
TNFRSF1A-212ENST00000539372 DDIT3P35638 169 aa20.81■□□□□ 0.92
TNFRSF1A-212ENST00000539372 TNFSF9P41273 254 aa20.81■□□□□ 0.92
TNFRSF1A-212ENST00000539372 VCPP55072 806 aaKnown RBP20.81■□□□□ 0.92
TNFRSF1A-212ENST00000539372 SPAG1Q07617 926 aa20.81■□□□□ 0.92
TNFRSF1A-212ENST00000539372 PPM1LQ5SGD2 360 aa20.81■□□□□ 0.92
TNFRSF1A-212ENST00000539372 GET4Q7L5D6 327 aaPredicted RBP20.81■□□□□ 0.92
TNFRSF1A-212ENST00000539372 KCNK12Q9HB15 430 aa20.81■□□□□ 0.92
TNFRSF1A-212ENST00000539372 TUBGCP4Q9UGJ1 667 aa20.81■□□□□ 0.92
TNFRSF1A-212ENST00000539372 SRPRBQ9Y5M8 271 aaKnown RBP20.81■□□□□ 0.92
TNFRSF1A-212ENST00000539372 CDY1Q9Y6F8 540 aa20.81■□□□□ 0.92
TNFRSF1A-212ENST00000539372 ZNF318Q5VUA4 2279 aa20.8■□□□□ 0.92
TNFRSF1A-212ENST00000539372 CCL16O15467 120 aa20.8■□□□□ 0.92
TNFRSF1A-212ENST00000539372 NMT1P30419 496 aaKnown RBP20.8■□□□□ 0.92
TNFRSF1A-212ENST00000539372 RPL9P32969 192 aaKnown RBP20.8■□□□□ 0.92
TNFRSF1A-212ENST00000539372 RAB33AQ14088 237 aa20.8■□□□□ 0.92
TNFRSF1A-212ENST00000539372 ZBTB41Q5SVQ8 909 aa20.8■□□□□ 0.92
TNFRSF1A-212ENST00000539372 ANKS3Q6ZW76 656 aa20.8■□□□□ 0.92
TNFRSF1A-212ENST00000539372 SLC7A14Q8TBB6 771 aa20.8■□□□□ 0.92
TNFRSF1A-212ENST00000539372 RSAD2Q8WXG1 361 aa20.8■□□□□ 0.92
TNFRSF1A-212ENST00000539372 KCNH6Q9H252 994 aa20.8■□□□□ 0.92
TNFRSF1A-212ENST00000539372 CCDC39Q9UFE4 941 aa20.8■□□□□ 0.92
TNFRSF1A-212ENST00000539372 NUB1Q9Y5A7 615 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms