RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 PCDHB13Q9Y5F0 798 aa14.97□□□□□ -0.01
CD9-208ENST00000538834 GRXCR2A6NFK2 248 aa14.96□□□□□ -0.01
CD9-208ENST00000538834 PER2O15055 1255 aa14.96□□□□□ -0.01
CD9-208ENST00000538834 EIF3DO15371 548 aaKnown RBP eCLIP14.96□□□□□ -0.01
CD9-208ENST00000538834 CLASP2O75122 1294 aaKnown RBP14.96□□□□□ -0.01
CD9-208ENST00000538834 KIF4AO95239 1232 aa14.96□□□□□ -0.01
CD9-208ENST00000538834 CXCL14O95715 111 aa14.96□□□□□ -0.01
CD9-208ENST00000538834 MYL1P05976 194 aa14.96□□□□□ -0.01
CD9-208ENST00000538834 IDEP14735 1019 aa14.96□□□□□ -0.01
CD9-208ENST00000538834 CASP1P29466 404 aa14.96□□□□□ -0.01
CD9-208ENST00000538834 KCNQ1P51787 676 aa14.96□□□□□ -0.01
CD9-208ENST00000538834 CUL4BQ13620 913 aa14.96□□□□□ -0.01
CD9-208ENST00000538834 BMT2Q1RMZ1 405 aa14.96□□□□□ -0.01
CD9-208ENST00000538834 PLPP4Q5VZY2 271 aa14.96□□□□□ -0.01
CD9-208ENST00000538834 FUT10Q6P4F1 479 aa14.96□□□□□ -0.01
CD9-208ENST00000538834 DCLRE1AQ6PJP8 1040 aa14.96□□□□□ -0.01
CD9-208ENST00000538834 C3orf58Q8NDZ4 430 aa14.96□□□□□ -0.01
CD9-208ENST00000538834 ENGASEQ8NFI3 743 aa14.96□□□□□ -0.01
CD9-208ENST00000538834 TMEM174Q8WUU8 243 aa14.96□□□□□ -0.01
CD9-208ENST00000538834 ACCSQ96QU6 501 aa14.96□□□□□ -0.01
CD9-208ENST00000538834 GDPD2Q9HCC8 539 aa14.96□□□□□ -0.01
CD9-208ENST00000538834 TBC1D7Q9P0N9 293 aa14.96□□□□□ -0.01
CD9-208ENST00000538834 ANKFY1Q9P2R3 1169 aa14.96□□□□□ -0.01
CD9-208ENST00000538834 PRG3Q9Y2Y8 225 aaPredicted RBP14.96□□□□□ -0.01
CD9-208ENST00000538834 CXCL8P10145 99 aa14.95□□□□□ -0.02
CD9-208ENST00000538834 CYP3A5P20815 502 aa14.95□□□□□ -0.02
CD9-208ENST00000538834 GARTP22102 1010 aa14.95□□□□□ -0.02
CD9-208ENST00000538834 KCNA5P22460 613 aa14.95□□□□□ -0.02
CD9-208ENST00000538834 LRPAP1P30533 357 aa14.95□□□□□ -0.02
CD9-208ENST00000538834 CLCNKBP51801 687 aa14.95□□□□□ -0.02
CD9-208ENST00000538834 YARSP54577 528 aaKnown RBP14.95□□□□□ -0.02
CD9-208ENST00000538834 OSTNP61366 133 aa14.95□□□□□ -0.02
CD9-208ENST00000538834 RBM10P98175 930 aaKnown RBP14.95□□□□□ -0.02
CD9-208ENST00000538834 POSTNQ15063 836 aa14.95□□□□□ -0.02
CD9-208ENST00000538834 SKIV2LQ15477 1246 aaKnown RBP14.95□□□□□ -0.02
CD9-208ENST00000538834 GLRA4Q5JXX5 417 aa14.95□□□□□ -0.02
CD9-208ENST00000538834 RBM23Q86U06 439 aaKnown RBP14.95□□□□□ -0.02
CD9-208ENST00000538834 SMRP1Q8NCR6 262 aa14.95□□□□□ -0.02
CD9-208ENST00000538834 AUTS2Q8WXX7 1259 aa14.95□□□□□ -0.02
CD9-208ENST00000538834 HPS3Q969F9 1004 aa14.95□□□□□ -0.02
CD9-208ENST00000538834 DDX27Q96GQ7 796 aaKnown RBP14.95□□□□□ -0.02
CD9-208ENST00000538834 KLHL5Q96PQ7 755 aa14.95□□□□□ -0.02
CD9-208ENST00000538834 COL25A1Q9BXS0 654 aaPredicted RBP14.95□□□□□ -0.02
CD9-208ENST00000538834 S1PR5Q9H228 398 aa14.95□□□□□ -0.02
CD9-208ENST00000538834 ENTPD7Q9NQZ7 604 aa14.95□□□□□ -0.02
CD9-208ENST00000538834 SLC38A7Q9NVC3 462 aa14.95□□□□□ -0.02
CD9-208ENST00000538834 CLDND1Q9NY35 253 aa14.95□□□□□ -0.02
CD9-208ENST00000538834 FNIP2Q9P278 1114 aa14.95□□□□□ -0.02
CD9-208ENST00000538834 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.95□□□□□ -0.02
CD9-208ENST00000538834 TRIOO75962 3097 aa14.95□□□□□ -0.02
CD9-208ENST00000538834 CASTOR2A6NHX0 329 aa14.94□□□□□ -0.02
CD9-208ENST00000538834 LACTBL1A8MY62 500 aa14.94□□□□□ -0.02
CD9-208ENST00000538834 TGFB1I1O43294 461 aa14.94□□□□□ -0.02
CD9-208ENST00000538834 NR1I2O75469 434 aa14.94□□□□□ -0.02
CD9-208ENST00000538834 PRPF6O94906 941 aaKnown RBP14.94□□□□□ -0.02
CD9-208ENST00000538834 GCNT3O95395 438 aa14.94□□□□□ -0.02
CD9-208ENST00000538834 CNPP09543 421 aaKnown RBP14.94□□□□□ -0.02
CD9-208ENST00000538834 FGFR3P22607 806 aa14.94□□□□□ -0.02
CD9-208ENST00000538834 RPL9P32969 192 aaKnown RBP14.94□□□□□ -0.02
CD9-208ENST00000538834 SYKP43405 635 aa14.94□□□□□ -0.02
CD9-208ENST00000538834 SNW1Q13573 536 aaKnown RBP14.94□□□□□ -0.02
CD9-208ENST00000538834 PUS10Q3MIT2 529 aaKnown RBP14.94□□□□□ -0.02
CD9-208ENST00000538834 FAM26FQ5R3K3 315 aa14.94□□□□□ -0.02
CD9-208ENST00000538834 LILRA6Q6PI73 481 aa14.94□□□□□ -0.02
CD9-208ENST00000538834 SYCE2Q6PIF2 218 aa14.94□□□□□ -0.02
CD9-208ENST00000538834 CD302Q8IX05 232 aa14.94□□□□□ -0.02
CD9-208ENST00000538834 GRAMD1CQ8IYS0 662 aa14.94□□□□□ -0.02
CD9-208ENST00000538834 FMR1NBQ8N0W7 255 aaPredicted RBP14.94□□□□□ -0.02
CD9-208ENST00000538834 ZSWIM2Q8NEG5 633 aa14.94□□□□□ -0.02
CD9-208ENST00000538834 MICAL1Q8TDZ2 1067 aa14.94□□□□□ -0.02
CD9-208ENST00000538834 SCFD1Q8WVM8 642 aa14.94□□□□□ -0.02
CD9-208ENST00000538834 SUSD6Q92537 303 aa14.94□□□□□ -0.02
CD9-208ENST00000538834 RABGGTAQ92696 567 aa14.94□□□□□ -0.02
CD9-208ENST00000538834 FBXL18Q96ME1 805 aa14.94□□□□□ -0.02
CD9-208ENST00000538834 BLZF1Q9H2G9 400 aa14.94□□□□□ -0.02
CD9-208ENST00000538834 ASB7Q9H672 318 aa14.94□□□□□ -0.02
CD9-208ENST00000538834 TMEM206Q9H813 350 aa14.94□□□□□ -0.02
CD9-208ENST00000538834 GOLGA2P5Q9HBQ8 144 aa14.94□□□□□ -0.02
CD9-208ENST00000538834 AGO2Q9UKV8 859 aaKnown RBP14.94□□□□□ -0.02
CD9-208ENST00000538834 DERAQ9Y315 318 aa14.94□□□□□ -0.02
CD9-208ENST00000538834 HCFC2Q9Y5Z7 792 aa14.94□□□□□ -0.02
CD9-208ENST00000538834 UBE4BO95155 1302 aa14.93□□□□□ -0.02
CD9-208ENST00000538834 MBTPS2O43462 519 aa14.93□□□□□ -0.02
CD9-208ENST00000538834 TBC1D4O60343 1298 aa14.93□□□□□ -0.02
CD9-208ENST00000538834 ZNF202O95125 648 aa14.93□□□□□ -0.02
CD9-208ENST00000538834 AFMP43652 599 aa14.93□□□□□ -0.02
CD9-208ENST00000538834 GLUD2P49448 558 aa14.93□□□□□ -0.02
CD9-208ENST00000538834 AARSP49588 968 aaKnown RBP eCLIP14.93□□□□□ -0.02
CD9-208ENST00000538834 CLCN4P51793 760 aa14.93□□□□□ -0.02
CD9-208ENST00000538834 ASIC1P78348 528 aa14.93□□□□□ -0.02
CD9-208ENST00000538834 DPYDQ12882 1025 aa14.93□□□□□ -0.02
CD9-208ENST00000538834 MRPL58Q14197 206 aaKnown RBP14.93□□□□□ -0.02
CD9-208ENST00000538834 USP41Q3LFD5 358 aa14.93□□□□□ -0.02
CD9-208ENST00000538834 KRBA2Q6ZNG9 492 aa14.93□□□□□ -0.02
CD9-208ENST00000538834 LNX1Q8TBB1 728 aaPredicted RBP14.93□□□□□ -0.02
CD9-208ENST00000538834 PIK3R5Q8WYR1 880 aa14.93□□□□□ -0.02
CD9-208ENST00000538834 C18orf25Q96B23 403 aaPredicted RBP14.93□□□□□ -0.02
CD9-208ENST00000538834 BICD1Q96G01 975 aa14.93□□□□□ -0.02
CD9-208ENST00000538834 MSTO1Q9BUK6 570 aa14.93□□□□□ -0.02
CD9-208ENST00000538834 IGFLR1Q9H665 355 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms