RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 BICD1Q96G01 975 aa16.38■□□□□ 0.21
RAB40B-202ENST00000538809 EPSTI1Q96J88 318 aa16.38■□□□□ 0.21
RAB40B-202ENST00000538809 ZMAT2Q96NC0 199 aaKnown RBP16.38■□□□□ 0.21
RAB40B-202ENST00000538809 ACAP3Q96P50 834 aa16.38■□□□□ 0.21
RAB40B-202ENST00000538809 ZSCAN16Q9H4T2 348 aaPredicted RBP16.38■□□□□ 0.21
RAB40B-202ENST00000538809 LARSQ9P2J5 1176 aaKnown RBP16.38■□□□□ 0.21
RAB40B-202ENST00000538809 ODF2LQ9ULJ1 636 aa16.38■□□□□ 0.21
RAB40B-202ENST00000538809 SCN1AP35498 2009 aa16.37■□□□□ 0.21
RAB40B-202ENST00000538809 TMEM189-UBE2V1I3L0A0 370 aa16.37■□□□□ 0.21
RAB40B-202ENST00000538809 ADAM12O43184 909 aa16.37■□□□□ 0.21
RAB40B-202ENST00000538809 TOM1L1O75674 476 aa16.37■□□□□ 0.21
RAB40B-202ENST00000538809 BRD1O95696 1058 aa16.37■□□□□ 0.21
RAB40B-202ENST00000538809 KRT18P05783 430 aaKnown RBP16.37■□□□□ 0.21
RAB40B-202ENST00000538809 BRCC3P46736 316 aa16.37■□□□□ 0.21
RAB40B-202ENST00000538809 ZNF131P52739 623 aa16.37■□□□□ 0.21
RAB40B-202ENST00000538809 ELAVL2Q12926 359 aaKnown RBP16.37■□□□□ 0.21
RAB40B-202ENST00000538809 UPP1Q16831 310 aa16.37■□□□□ 0.21
RAB40B-202ENST00000538809 XKR4Q5GH76 650 aa16.37■□□□□ 0.21
RAB40B-202ENST00000538809 CD300LGQ6UXG3 332 aa16.37■□□□□ 0.21
RAB40B-202ENST00000538809 ALKAL1Q6UXT8 129 aa16.37■□□□□ 0.21
RAB40B-202ENST00000538809 HAUS6Q7Z4H7 955 aa16.37■□□□□ 0.21
RAB40B-202ENST00000538809 GPR65Q8IYL9 337 aa16.37■□□□□ 0.21
RAB40B-202ENST00000538809 TMEM130Q8N3G9 435 aa16.37■□□□□ 0.21
RAB40B-202ENST00000538809 MYCT1Q8N699 235 aa16.37■□□□□ 0.21
RAB40B-202ENST00000538809 LNX1Q8TBB1 728 aaPredicted RBP16.37■□□□□ 0.21
RAB40B-202ENST00000538809 LARP4BQ92615 738 aaKnown RBP16.37■□□□□ 0.21
RAB40B-202ENST00000538809 PBXIP1Q96AQ6 731 aa16.37■□□□□ 0.21
RAB40B-202ENST00000538809 C18orf25Q96B23 403 aaPredicted RBP16.37■□□□□ 0.21
RAB40B-202ENST00000538809 ZNF707Q96C28 371 aaPredicted RBP16.37■□□□□ 0.21
RAB40B-202ENST00000538809 FAM122AQ96E09 287 aa16.37■□□□□ 0.21
RAB40B-202ENST00000538809 UROC1Q96N76 676 aa16.37■□□□□ 0.21
RAB40B-202ENST00000538809 CLSTN3Q9BQT9 956 aa16.37■□□□□ 0.21
RAB40B-202ENST00000538809 HAPLN2Q9GZV7 340 aa16.37■□□□□ 0.21
RAB40B-202ENST00000538809 ZHX3Q9H4I2 956 aa16.37■□□□□ 0.21
RAB40B-202ENST00000538809 LIMD1Q9UGP4 676 aa16.37■□□□□ 0.21
RAB40B-202ENST00000538809 WDFY4Q6ZS81 3184 aa16.37■□□□□ 0.21
RAB40B-202ENST00000538809 CLUHO75153 1309 aa16.37■□□□□ 0.21
RAB40B-202ENST00000538809 TKTP29401 623 aaKnown RBP16.36■□□□□ 0.21
RAB40B-202ENST00000538809 NASPP49321 788 aaPredicted RBP16.36■□□□□ 0.21
RAB40B-202ENST00000538809 MTMR3Q13615 1198 aa16.36■□□□□ 0.21
RAB40B-202ENST00000538809 SLC39A14Q15043 492 aa16.36■□□□□ 0.21
RAB40B-202ENST00000538809 LILRA6Q6PI73 481 aa16.36■□□□□ 0.21
RAB40B-202ENST00000538809 ZPBP2Q6X784 338 aa16.36■□□□□ 0.21
RAB40B-202ENST00000538809 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.36■□□□□ 0.21
RAB40B-202ENST00000538809 HSCBQ8IWL3 235 aa16.36■□□□□ 0.21
RAB40B-202ENST00000538809 ZDHHC14Q8IZN3 488 aa16.36■□□□□ 0.21
RAB40B-202ENST00000538809 ASIC4Q96FT7 647 aa16.36■□□□□ 0.21
RAB40B-202ENST00000538809 CLIC6Q96NY7 704 aa16.36■□□□□ 0.21
RAB40B-202ENST00000538809 FIZ1Q96SL8 496 aa16.36■□□□□ 0.21
RAB40B-202ENST00000538809 CNTN3Q9P232 1028 aa16.36■□□□□ 0.21
RAB40B-202ENST00000538809 DPP7Q9UHL4 492 aa16.36■□□□□ 0.21
RAB40B-202ENST00000538809 FBXW11Q9UKB1 542 aa16.36■□□□□ 0.21
RAB40B-202ENST00000538809 SORCS3Q9UPU3 1222 aa16.36■□□□□ 0.21
RAB40B-202ENST00000538809 USTQ9Y2C2 406 aa16.36■□□□□ 0.21
RAB40B-202ENST00000538809 H0YCG3 227 aa16.35■□□□□ 0.21
RAB40B-202ENST00000538809 PODXLO00592 558 aa16.35■□□□□ 0.21
RAB40B-202ENST00000538809 N4BP1O75113 896 aaKnown RBP16.35■□□□□ 0.21
RAB40B-202ENST00000538809 TBCAO75347 108 aaKnown RBP16.35■□□□□ 0.21
RAB40B-202ENST00000538809 CXCL8P10145 99 aa16.35■□□□□ 0.21
RAB40B-202ENST00000538809 KCNE1P15382 129 aa16.35■□□□□ 0.21
RAB40B-202ENST00000538809 FGFR3P22607 806 aa16.35■□□□□ 0.21
RAB40B-202ENST00000538809 LIG4P49917 911 aa16.35■□□□□ 0.21
RAB40B-202ENST00000538809 MCL1Q07820 350 aa16.35■□□□□ 0.21
RAB40B-202ENST00000538809 DCLRE1AQ6PJP8 1040 aa16.35■□□□□ 0.21
RAB40B-202ENST00000538809 OTOP3Q7RTS5 596 aa16.35■□□□□ 0.21
RAB40B-202ENST00000538809 HDAC7Q8WUI4 952 aa16.35■□□□□ 0.21
RAB40B-202ENST00000538809 ACSF2Q96CM8 615 aaPredicted RBP16.35■□□□□ 0.21
RAB40B-202ENST00000538809 DDX27Q96GQ7 796 aaKnown RBP16.35■□□□□ 0.21
RAB40B-202ENST00000538809 MFSD14AQ96MC6 490 aa16.35■□□□□ 0.21
RAB40B-202ENST00000538809 PLEKHA4Q9H4M7 779 aa16.35■□□□□ 0.21
RAB40B-202ENST00000538809 PIDD1Q9HB75 910 aa16.35■□□□□ 0.21
RAB40B-202ENST00000538809 PARVGQ9HBI0 331 aa16.35■□□□□ 0.21
RAB40B-202ENST00000538809 SLC38A7Q9NVC3 462 aa16.35■□□□□ 0.21
RAB40B-202ENST00000538809 TUBGCP4Q9UGJ1 667 aa16.35■□□□□ 0.21
RAB40B-202ENST00000538809 KCNG1Q9UIX4 513 aa16.35■□□□□ 0.21
RAB40B-202ENST00000538809 HNRNPDLO14979 420 aaKnown RBP16.34■□□□□ 0.21
RAB40B-202ENST00000538809 CLDN3O15551 220 aa16.34■□□□□ 0.21
RAB40B-202ENST00000538809 PDGFBP01127 241 aaPredicted RBP16.34■□□□□ 0.21
RAB40B-202ENST00000538809 NMT1P30419 496 aaKnown RBP16.34■□□□□ 0.21
RAB40B-202ENST00000538809 GBP2P32456 591 aaPredicted RBP16.34■□□□□ 0.21
RAB40B-202ENST00000538809 DDIT3P35638 169 aa16.34■□□□□ 0.21
RAB40B-202ENST00000538809 TNFSF9P41273 254 aa16.34■□□□□ 0.21
RAB40B-202ENST00000538809 SPAG1Q07617 926 aa16.34■□□□□ 0.21
RAB40B-202ENST00000538809 SLC10A6Q3KNW5 377 aa16.34■□□□□ 0.21
RAB40B-202ENST00000538809 ZBTB41Q5SVQ8 909 aa16.34■□□□□ 0.21
RAB40B-202ENST00000538809 BMP8AQ7Z5Y6 402 aa16.34■□□□□ 0.21
RAB40B-202ENST00000538809 PLCD3Q8N3E9 789 aa16.34■□□□□ 0.21
RAB40B-202ENST00000538809 LINC00301Q8NCQ3 95 aa16.34■□□□□ 0.21
RAB40B-202ENST00000538809 WDR6Q9NNW5 1121 aaKnown RBP16.34■□□□□ 0.21
RAB40B-202ENST00000538809 ZDHHC7Q9NXF8 308 aa16.34■□□□□ 0.21
RAB40B-202ENST00000538809 MTRRQ9UBK8 725 aa16.34■□□□□ 0.21
RAB40B-202ENST00000538809 TBX20Q9UMR3 447 aa16.34■□□□□ 0.21
RAB40B-202ENST00000538809 TRAK2O60296 914 aa16.33■□□□□ 0.2
RAB40B-202ENST00000538809 ZMYND10O75800 440 aa16.33■□□□□ 0.2
RAB40B-202ENST00000538809 C8AP07357 584 aa16.33■□□□□ 0.2
RAB40B-202ENST00000538809 OR1D2P34982 312 aa16.33■□□□□ 0.2
RAB40B-202ENST00000538809 LIN9Q5TKA1 542 aa16.33■□□□□ 0.2
RAB40B-202ENST00000538809 PDXDC1Q6P996 788 aa16.33■□□□□ 0.2
RAB40B-202ENST00000538809 RSPO2Q6UXX9 243 aaPredicted RBP16.33■□□□□ 0.2
RAB40B-202ENST00000538809 GET4Q7L5D6 327 aaPredicted RBP16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms