RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 PCDHB2Q9Y5E7 798 aa3.87□□□□□ -1.79
PTPN22-211ENST00000538253 COL11A1P12107 1806 aaPredicted RBP3.86□□□□□ -1.79
PTPN22-211ENST00000538253 C9IYK1 514 aa3.86□□□□□ -1.79
PTPN22-211ENST00000538253 IKBKBO14920 756 aa3.86□□□□□ -1.79
PTPN22-211ENST00000538253 XYLBO75191 536 aa3.86□□□□□ -1.79
PTPN22-211ENST00000538253 PPFIA2O75334 1257 aa3.86□□□□□ -1.79
PTPN22-211ENST00000538253 ADH1AP07327 375 aa3.86□□□□□ -1.79
PTPN22-211ENST00000538253 POU2F2P09086 479 aa3.86□□□□□ -1.79
PTPN22-211ENST00000538253 KCNE1P15382 129 aa3.86□□□□□ -1.79
PTPN22-211ENST00000538253 CSF2RAP15509 400 aa3.86□□□□□ -1.79
PTPN22-211ENST00000538253 TBXAS1P24557 533 aaPredicted RBP3.86□□□□□ -1.79
PTPN22-211ENST00000538253 CDC25AP30304 524 aa3.86□□□□□ -1.79
PTPN22-211ENST00000538253 CASQ1P31415 396 aa3.86□□□□□ -1.79
PTPN22-211ENST00000538253 NPEPPSP55786 919 aa3.86□□□□□ -1.79
PTPN22-211ENST00000538253 ERVK-21P61565 698 aa3.86□□□□□ -1.79
PTPN22-211ENST00000538253 WDR5P61964 334 aaKnown RBP3.86□□□□□ -1.79
PTPN22-211ENST00000538253 PLCB3Q01970 1234 aa3.86□□□□□ -1.79
PTPN22-211ENST00000538253 MBTD1Q05BQ5 628 aa3.86□□□□□ -1.79
PTPN22-211ENST00000538253 PAK1Q13153 545 aa3.86□□□□□ -1.79
PTPN22-211ENST00000538253 VEPH1Q14D04 833 aa3.86□□□□□ -1.79
PTPN22-211ENST00000538253 PLA2G4FQ68DD2 849 aa3.86□□□□□ -1.79
PTPN22-211ENST00000538253 ZNF720Q7Z2F6 126 aa3.86□□□□□ -1.79
PTPN22-211ENST00000538253 TADA2BQ86TJ2 420 aa3.86□□□□□ -1.79
PTPN22-211ENST00000538253 WDR49Q8IV35 697 aa3.86□□□□□ -1.79
PTPN22-211ENST00000538253 BRSK2Q8IWQ3 736 aa3.86□□□□□ -1.79
PTPN22-211ENST00000538253 LRRC71Q8N4P6 559 aa3.86□□□□□ -1.79
PTPN22-211ENST00000538253 UHMK1Q8TAS1 419 aaKnown RBP3.86□□□□□ -1.79
PTPN22-211ENST00000538253 JAKMIP2Q96AA8 810 aa3.86□□□□□ -1.79
PTPN22-211ENST00000538253 PAGE5Q96GU1 130 aa3.86□□□□□ -1.79
PTPN22-211ENST00000538253 PNMA5Q96PV4 448 aa3.86□□□□□ -1.79
PTPN22-211ENST00000538253 ACO2Q99798 780 aaKnown RBP3.86□□□□□ -1.79
PTPN22-211ENST00000538253 REEP2Q9BRK0 252 aa3.86□□□□□ -1.79
PTPN22-211ENST00000538253 RHOBTB2Q9BYZ6 727 aa3.86□□□□□ -1.79
PTPN22-211ENST00000538253 CYP3A43Q9HB55 503 aa3.86□□□□□ -1.79
PTPN22-211ENST00000538253 COMMD8Q9NX08 183 aa3.86□□□□□ -1.79
PTPN22-211ENST00000538253 HSFX1Q9UBD0 423 aa3.86□□□□□ -1.79
PTPN22-211ENST00000538253 SERTAD1Q9UHV2 236 aa3.86□□□□□ -1.79
PTPN22-211ENST00000538253 NOC2LQ9Y3T9 749 aaKnown RBP3.86□□□□□ -1.79
PTPN22-211ENST00000538253 ZFP37Q9Y6Q3 630 aaPredicted RBP3.86□□□□□ -1.79
PTPN22-211ENST00000538253 TBKBP1A7MCY6 615 aa3.86□□□□□ -1.79
PTPN22-211ENST00000538253 SART1O43290 800 aaKnown RBP3.86□□□□□ -1.79
PTPN22-211ENST00000538253 SORBS3O60504 671 aa3.86□□□□□ -1.79
PTPN22-211ENST00000538253 TSPAN1O60635 241 aa3.86□□□□□ -1.79
PTPN22-211ENST00000538253 PPFIA3O75145 1194 aa3.86□□□□□ -1.79
PTPN22-211ENST00000538253 GPR32O75388 356 aa3.86□□□□□ -1.79
PTPN22-211ENST00000538253 TADA2AO75478 443 aa3.86□□□□□ -1.79
PTPN22-211ENST00000538253 CD2BP2O95400 341 aaKnown RBP3.86□□□□□ -1.79
PTPN22-211ENST00000538253 STAU1O95793 577 aaKnown RBP3.86□□□□□ -1.79
PTPN22-211ENST00000538253 VTNP04004 478 aa3.86□□□□□ -1.79
PTPN22-211ENST00000538253 PFKLP17858 780 aa3.86□□□□□ -1.79
PTPN22-211ENST00000538253 CTNNB1P35222 781 aa3.86□□□□□ -1.79
PTPN22-211ENST00000538253 BMPR1AP36894 532 aa3.86□□□□□ -1.79
PTPN22-211ENST00000538253 MAGEA8P43361 318 aa3.86□□□□□ -1.79
PTPN22-211ENST00000538253 LHX1P48742 406 aa3.86□□□□□ -1.79
PTPN22-211ENST00000538253 MNX1P50219 401 aaPredicted RBP3.86□□□□□ -1.79
PTPN22-211ENST00000538253 TNNC1P63316 161 aa3.86□□□□□ -1.79
PTPN22-211ENST00000538253 HTRA4P83105 476 aaPredicted RBP3.86□□□□□ -1.79
PTPN22-211ENST00000538253 GABPB1Q06547 395 aaPredicted RBP3.86□□□□□ -1.79
PTPN22-211ENST00000538253 TMEM132DQ14C87 1099 aa3.86□□□□□ -1.79
PTPN22-211ENST00000538253 SYCP1Q15431 976 aa3.86□□□□□ -1.79
PTPN22-211ENST00000538253 USP41Q3LFD5 358 aa3.86□□□□□ -1.79
PTPN22-211ENST00000538253 VWA3BQ502W6 1294 aa3.86□□□□□ -1.79
PTPN22-211ENST00000538253 LIN9Q5TKA1 542 aa3.86□□□□□ -1.79
PTPN22-211ENST00000538253 RASIP1Q5U651 963 aa3.86□□□□□ -1.79
PTPN22-211ENST00000538253 TPGS2Q68CL5 300 aa3.86□□□□□ -1.79
PTPN22-211ENST00000538253 FRMD5Q7Z6J6 570 aa3.86□□□□□ -1.79
PTPN22-211ENST00000538253 FILIP1Q7Z7B0 1213 aa3.86□□□□□ -1.79
PTPN22-211ENST00000538253 ITIH5Q86UX2 942 aa3.86□□□□□ -1.79
PTPN22-211ENST00000538253 FAM228AQ86W67 206 aa3.86□□□□□ -1.79
PTPN22-211ENST00000538253 SFR1Q86XK3 245 aa3.86□□□□□ -1.79
PTPN22-211ENST00000538253 SNRNP27Q8WVK2 155 aaKnown RBP3.86□□□□□ -1.79
PTPN22-211ENST00000538253 TNIP3Q96KP6 325 aa3.86□□□□□ -1.79
PTPN22-211ENST00000538253 RIPOR3Q96MK2 946 aa3.86□□□□□ -1.79
PTPN22-211ENST00000538253 NOX5Q96PH1 765 aa3.86□□□□□ -1.79
PTPN22-211ENST00000538253 HERC2P3Q9BVR0 1158 aa3.86□□□□□ -1.79
PTPN22-211ENST00000538253 GPR88Q9GZN0 384 aa3.86□□□□□ -1.79
PTPN22-211ENST00000538253 RASSF4Q9H2L5 321 aa3.86□□□□□ -1.79
PTPN22-211ENST00000538253 ASB3Q9Y575 518 aa3.86□□□□□ -1.79
PTPN22-211ENST00000538253 STYXL1Q9Y6J8 313 aa3.86□□□□□ -1.79
PTPN22-211ENST00000538253 COL4A6Q14031 1691 aa3.86□□□□□ -1.79
PTPN22-211ENST00000538253 FAM205CA6NFA0 338 aa3.86□□□□□ -1.79
PTPN22-211ENST00000538253 SLC16A4O15374 487 aa3.86□□□□□ -1.79
PTPN22-211ENST00000538253 CCP110O43303 1012 aa3.86□□□□□ -1.79
PTPN22-211ENST00000538253 HUS1O60921 280 aa3.86□□□□□ -1.79
PTPN22-211ENST00000538253 NEFHP12036 1026 aa3.86□□□□□ -1.79
PTPN22-211ENST00000538253 EEF1GP26641 437 aaKnown RBP3.86□□□□□ -1.79
PTPN22-211ENST00000538253 MTHFRP42898 656 aa3.86□□□□□ -1.79
PTPN22-211ENST00000538253 TAF6P49848 677 aa3.86□□□□□ -1.79
PTPN22-211ENST00000538253 NLRP12P59046 1061 aa3.86□□□□□ -1.79
PTPN22-211ENST00000538253 RPL10AP62906 217 aaKnown RBP3.86□□□□□ -1.79
PTPN22-211ENST00000538253 TAF12Q16514 161 aa3.86□□□□□ -1.79
PTPN22-211ENST00000538253 KLHL40Q2TBA0 621 aa3.86□□□□□ -1.79
PTPN22-211ENST00000538253 DSTYKQ6XUX3 929 aa3.86□□□□□ -1.79
PTPN22-211ENST00000538253 C4orf50Q6ZRC1 276 aa3.86□□□□□ -1.79
PTPN22-211ENST00000538253 VPS36Q86VN1 386 aa3.86□□□□□ -1.79
PTPN22-211ENST00000538253 SPNS2Q8IVW8 549 aa3.86□□□□□ -1.79
PTPN22-211ENST00000538253 TMEM161BQ8NDZ6 487 aa3.86□□□□□ -1.79
PTPN22-211ENST00000538253 TATDN2Q93075 761 aa3.86□□□□□ -1.79
PTPN22-211ENST00000538253 E2F7Q96AV8 911 aa3.86□□□□□ -1.79
PTPN22-211ENST00000538253 LENG1Q96BZ8 264 aaPredicted RBP3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms