RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 ADGRA2Q96PE1 1338 aa11.82□□□□□ -0.52
LINC00346-201ENST00000538077 PLA2R1Q13018 1463 aa11.82□□□□□ -0.52
LINC00346-201ENST00000538077 PGK2P07205 417 aa11.82□□□□□ -0.52
LINC00346-201ENST00000538077 MAGOHP61326 146 aaKnown RBP11.82□□□□□ -0.52
LINC00346-201ENST00000538077 PDAP1Q13442 181 aaKnown RBP11.82□□□□□ -0.52
LINC00346-201ENST00000538077 DGKDQ16760 1214 aa11.82□□□□□ -0.52
LINC00346-201ENST00000538077 IZUMO3Q5VZ72 239 aa11.82□□□□□ -0.52
LINC00346-201ENST00000538077 SHC4Q6S5L8 630 aa11.82□□□□□ -0.52
LINC00346-201ENST00000538077 TEX13BQ9BXU2 312 aa11.82□□□□□ -0.52
LINC00346-201ENST00000538077 EPC1Q9H2F5 836 aa11.82□□□□□ -0.52
LINC00346-201ENST00000538077 ABI2Q9NYB9 513 aaPredicted RBP11.82□□□□□ -0.52
LINC00346-201ENST00000538077 CHORDC1Q9UHD1 332 aaPredicted RBP11.82□□□□□ -0.52
LINC00346-201ENST00000538077 KRT38O76015 456 aa11.82□□□□□ -0.52
LINC00346-201ENST00000538077 MYO1DO94832 1006 aa11.82□□□□□ -0.52
LINC00346-201ENST00000538077 KRT7P08729 469 aa11.82□□□□□ -0.52
LINC00346-201ENST00000538077 TWF1Q12792 350 aa11.82□□□□□ -0.52
LINC00346-201ENST00000538077 ITPK1Q13572 414 aa11.82□□□□□ -0.52
LINC00346-201ENST00000538077 SMTNL2Q2TAL5 461 aa11.82□□□□□ -0.52
LINC00346-201ENST00000538077 MFN1Q8IWA4 741 aa11.82□□□□□ -0.52
LINC00346-201ENST00000538077 OSBPL9Q96SU4 736 aa11.82□□□□□ -0.52
LINC00346-201ENST00000538077 DEFB129Q9H1M3 183 aa11.82□□□□□ -0.52
LINC00346-201ENST00000538077 ZNF212Q9UDV6 495 aa11.82□□□□□ -0.52
LINC00346-201ENST00000538077 C17orf102A2RUQ5 167 aa11.82□□□□□ -0.52
LINC00346-201ENST00000538077 HLA-DPA1P20036 260 aa11.82□□□□□ -0.52
LINC00346-201ENST00000538077 GGCXP38435 758 aa11.82□□□□□ -0.52
LINC00346-201ENST00000538077 KLHL38Q2WGJ6 581 aa11.82□□□□□ -0.52
LINC00346-201ENST00000538077 ATF7IP2Q5U623 682 aa11.82□□□□□ -0.52
LINC00346-201ENST00000538077 DEFB132Q7Z7B7 95 aa11.82□□□□□ -0.52
LINC00346-201ENST00000538077 KCNV2Q8TDN2 545 aa11.82□□□□□ -0.52
LINC00346-201ENST00000538077 TAAR1Q96RJ0 339 aa11.82□□□□□ -0.52
LINC00346-201ENST00000538077 ANGPTL2Q9UKU9 493 aa11.82□□□□□ -0.52
LINC00346-201ENST00000538077 PIK3C2BO00750 1634 aa11.81□□□□□ -0.52
LINC00346-201ENST00000538077 CYP2C9P11712 490 aa11.81□□□□□ -0.52
LINC00346-201ENST00000538077 YY1P25490 414 aa11.81□□□□□ -0.52
LINC00346-201ENST00000538077 IFNA8P32881 189 aa11.81□□□□□ -0.52
LINC00346-201ENST00000538077 ZC3H12BQ5HYM0 836 aaKnown RBP11.81□□□□□ -0.52
LINC00346-201ENST00000538077 STOX1Q6ZVD7 989 aa11.81□□□□□ -0.52
LINC00346-201ENST00000538077 NEDD1Q8NHV4 660 aa11.81□□□□□ -0.52
LINC00346-201ENST00000538077 ABTB1Q969K4 478 aaPredicted RBP11.81□□□□□ -0.52
LINC00346-201ENST00000538077 CRAMP1Q96RY5 1269 aa11.81□□□□□ -0.52
LINC00346-201ENST00000538077 NUDT12Q9BQG2 462 aa11.81□□□□□ -0.52
LINC00346-201ENST00000538077 CCDC90BQ9GZT6 254 aa11.81□□□□□ -0.52
LINC00346-201ENST00000538077 PRG3Q9Y2Y8 225 aaPredicted RBP11.81□□□□□ -0.52
LINC00346-201ENST00000538077 ZNF185O15231 689 aa11.81□□□□□ -0.52
LINC00346-201ENST00000538077 TCF7P36402 384 aaPredicted RBP11.81□□□□□ -0.52
LINC00346-201ENST00000538077 EFNA5P52803 228 aa11.81□□□□□ -0.52
LINC00346-201ENST00000538077 C10orf120Q5SQS8 335 aa11.81□□□□□ -0.52
LINC00346-201ENST00000538077 LRRC8EQ6NSJ5 796 aa11.81□□□□□ -0.52
LINC00346-201ENST00000538077 RHOT1Q8IXI2 618 aa11.81□□□□□ -0.52
LINC00346-201ENST00000538077 RAB42Q8N4Z0 105 aa11.81□□□□□ -0.52
LINC00346-201ENST00000538077 ZNF579Q8NAF0 562 aaKnown RBP11.81□□□□□ -0.52
LINC00346-201ENST00000538077 FBXO41Q8TF61 875 aa11.81□□□□□ -0.52
LINC00346-201ENST00000538077 ABHD8Q96I13 439 aa11.81□□□□□ -0.52
LINC00346-201ENST00000538077 TMEM117Q9H0C3 514 aa11.81□□□□□ -0.52
LINC00346-201ENST00000538077 A0A087WUV0 522 aaPredicted RBP11.81□□□□□ -0.52
LINC00346-201ENST00000538077 CPT1AP50416 773 aa11.81□□□□□ -0.52
LINC00346-201ENST00000538077 ZNF543Q08ER8 600 aa11.81□□□□□ -0.52
LINC00346-201ENST00000538077 MMS22LQ6ZRQ5 1243 aa11.81□□□□□ -0.52
LINC00346-201ENST00000538077 ATG4CQ96DT6 458 aa11.81□□□□□ -0.52
LINC00346-201ENST00000538077 EPAS1Q99814 870 aa11.81□□□□□ -0.52
LINC00346-201ENST00000538077 LRG1P02750 347 aa11.81□□□□□ -0.52
LINC00346-201ENST00000538077 KLK7P49862 253 aa11.81□□□□□ -0.52
LINC00346-201ENST00000538077 NCOA4Q13772 614 aa11.81□□□□□ -0.52
LINC00346-201ENST00000538077 EPC2Q52LR7 807 aa11.81□□□□□ -0.52
LINC00346-201ENST00000538077 MFSD4BQ5TF39 518 aa11.81□□□□□ -0.52
LINC00346-201ENST00000538077 CATSPER3Q86XQ3 398 aa11.81□□□□□ -0.52
LINC00346-201ENST00000538077 RNF14Q9UBS8 474 aa11.81□□□□□ -0.52
LINC00346-201ENST00000538077 PVALEFA0A1B0GWK0 134 aa11.81□□□□□ -0.52
LINC00346-201ENST00000538077 ANKRD65E5RJM6 399 aa11.81□□□□□ -0.52
LINC00346-201ENST00000538077 GYG2O15488 501 aa11.81□□□□□ -0.52
LINC00346-201ENST00000538077 ARIH2O95376 493 aa11.81□□□□□ -0.52
LINC00346-201ENST00000538077 TAL1P17542 331 aaPredicted RBP11.81□□□□□ -0.52
LINC00346-201ENST00000538077 SCP2P22307 547 aa11.81□□□□□ -0.52
LINC00346-201ENST00000538077 ALDH1A3P47895 512 aa11.81□□□□□ -0.52
LINC00346-201ENST00000538077 HSD17B4P51659 736 aa11.81□□□□□ -0.52
LINC00346-201ENST00000538077 RBP5P82980 135 aa11.81□□□□□ -0.52
LINC00346-201ENST00000538077 ALS2CLQ60I27 953 aa11.81□□□□□ -0.52
LINC00346-201ENST00000538077 ANKS3Q6ZW76 656 aa11.81□□□□□ -0.52
LINC00346-201ENST00000538077 TADA2BQ86TJ2 420 aa11.81□□□□□ -0.52
LINC00346-201ENST00000538077 WDR75Q8IWA0 830 aaKnown RBP11.81□□□□□ -0.52
LINC00346-201ENST00000538077 TRIM54Q9BYV2 358 aa11.81□□□□□ -0.52
LINC00346-201ENST00000538077 POLR1AO95602 1720 aaPredicted RBP11.8□□□□□ -0.52
LINC00346-201ENST00000538077 C19orf81C9J6K1 198 aa11.8□□□□□ -0.52
LINC00346-201ENST00000538077 ORC4O43929 436 aa11.8□□□□□ -0.52
LINC00346-201ENST00000538077 ALDH18A1P54886 795 aaKnown RBP11.8□□□□□ -0.52
LINC00346-201ENST00000538077 PDCLQ13371 301 aa11.8□□□□□ -0.52
LINC00346-201ENST00000538077 PKN3Q6P5Z2 889 aa11.8□□□□□ -0.52
LINC00346-201ENST00000538077 DEFB128Q7Z7B8 93 aa11.8□□□□□ -0.52
LINC00346-201ENST00000538077 B4GALNT2Q8NHY0 566 aa11.8□□□□□ -0.52
LINC00346-201ENST00000538077 ARHGEF40Q8TER5 1519 aa11.8□□□□□ -0.52
LINC00346-201ENST00000538077 USP27XA6NNY8 438 aa11.8□□□□□ -0.52
LINC00346-201ENST00000538077 AGRPO00253 132 aa11.8□□□□□ -0.52
LINC00346-201ENST00000538077 ATXN3P54252 364 aaPredicted RBP11.8□□□□□ -0.52
LINC00346-201ENST00000538077 MDM2Q00987 491 aaPredicted RBP11.8□□□□□ -0.52
LINC00346-201ENST00000538077 SLC9A5Q14940 896 aa11.8□□□□□ -0.52
LINC00346-201ENST00000538077 C9orf131Q5VYM1 1079 aa11.8□□□□□ -0.52
LINC00346-201ENST00000538077 PPP2R3CQ969Q6 453 aa11.8□□□□□ -0.52
LINC00346-201ENST00000538077 APOL5Q9BWW9 433 aa11.8□□□□□ -0.52
LINC00346-201ENST00000538077 SENP2Q9HC62 589 aa11.8□□□□□ -0.52
LINC00346-201ENST00000538077 MAD2L2Q9UI95 211 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms