RNA–Protein interactions for RNA: ENST00000537877.5

DDB1-209, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-209ENST00000537877 HOXD11P31277 338 aaPredicted RBP13.33□□□□□ -0.27
DDB1-209ENST00000537877 CD52P31358 61 aa13.33□□□□□ -0.27
DDB1-209ENST00000537877 KCNJ6P48051 423 aa13.33□□□□□ -0.27
DDB1-209ENST00000537877 RAB27AP51159 221 aa13.33□□□□□ -0.27
DDB1-209ENST00000537877 NFX1Q12986 1120 aaKnown RBP13.33□□□□□ -0.27
DDB1-209ENST00000537877 MEA1Q16626 185 aa13.33□□□□□ -0.27
DDB1-209ENST00000537877 SLC10A6Q3KNW5 377 aa13.33□□□□□ -0.27
DDB1-209ENST00000537877 LRRC8DQ7L1W4 858 aa13.33□□□□□ -0.27
DDB1-209ENST00000537877 ZSCAN30Q86W11 494 aa13.33□□□□□ -0.27
DDB1-209ENST00000537877 EFCAB13Q8IY85 973 aa13.33□□□□□ -0.27
DDB1-209ENST00000537877 OR5B17Q8NGF7 314 aa13.33□□□□□ -0.27
DDB1-209ENST00000537877 TAS1R2Q8TE23 839 aa13.33□□□□□ -0.27
DDB1-209ENST00000537877 FAM81BQ96LP2 452 aa13.33□□□□□ -0.27
DDB1-209ENST00000537877 TOX2Q96NM4 488 aa13.33□□□□□ -0.27
DDB1-209ENST00000537877 NT5C1BQ96P26 610 aa13.33□□□□□ -0.27
DDB1-209ENST00000537877 TMEM106CQ9BVX2 250 aa13.33□□□□□ -0.27
DDB1-209ENST00000537877 TRAIPQ9BWF2 469 aa13.33□□□□□ -0.27
DDB1-209ENST00000537877 NXF3Q9H4D5 531 aaKnown RBP13.33□□□□□ -0.27
DDB1-209ENST00000537877 AGO3Q9H9G7 860 aaKnown RBP13.33□□□□□ -0.27
DDB1-209ENST00000537877 NLRC4Q9NPP4 1024 aa13.33□□□□□ -0.27
DDB1-209ENST00000537877 PADI3Q9ULW8 664 aa13.33□□□□□ -0.27
DDB1-209ENST00000537877 PLAGL2Q9UPG8 496 aa13.33□□□□□ -0.27
DDB1-209ENST00000537877 LRRC53A6NM62 1247 aa13.32□□□□□ -0.28
DDB1-209ENST00000537877 DCDC2CA8MYV0 355 aa13.32□□□□□ -0.28
DDB1-209ENST00000537877 ARHGAP6O43182 974 aa13.32□□□□□ -0.28
DDB1-209ENST00000537877 PHACTR2O75167 634 aa13.32□□□□□ -0.28
DDB1-209ENST00000537877 RECQL4O94761 1208 aa13.32□□□□□ -0.28
DDB1-209ENST00000537877 TFAMQ00059 246 aaKnown RBP13.32□□□□□ -0.28
DDB1-209ENST00000537877 CDK17Q00537 523 aa13.32□□□□□ -0.28
DDB1-209ENST00000537877 APBA1Q02410 837 aa13.32□□□□□ -0.28
DDB1-209ENST00000537877 DSC3Q14574 896 aa13.32□□□□□ -0.28
DDB1-209ENST00000537877 TMEM132DQ14C87 1099 aa13.32□□□□□ -0.28
DDB1-209ENST00000537877 JADE1Q6IE81 842 aa13.32□□□□□ -0.28
DDB1-209ENST00000537877 CYP26C1Q6V0L0 522 aa13.32□□□□□ -0.28
DDB1-209ENST00000537877 RRAGAQ7L523 313 aa13.32□□□□□ -0.28
DDB1-209ENST00000537877 TMTC1Q8IUR5 882 aa13.32□□□□□ -0.28
DDB1-209ENST00000537877 SEMA4DQ92854 862 aa13.32□□□□□ -0.28
DDB1-209ENST00000537877 SPAG5Q96R06 1193 aa13.32□□□□□ -0.28
DDB1-209ENST00000537877 IMPG2Q9BZV3 1241 aa13.32□□□□□ -0.28
DDB1-209ENST00000537877 MTMR12Q9C0I1 747 aa13.32□□□□□ -0.28
DDB1-209ENST00000537877 C1orf112Q9NSG2 853 aa13.32□□□□□ -0.28
DDB1-209ENST00000537877 FAM105AQ9NUU6 356 aa13.32□□□□□ -0.28
DDB1-209ENST00000537877 SNTG2Q9NY99 539 aa13.32□□□□□ -0.28
DDB1-209ENST00000537877 CNTN3Q9P232 1028 aa13.32□□□□□ -0.28
DDB1-209ENST00000537877 IPPQ9Y573 584 aa13.32□□□□□ -0.28
DDB1-209ENST00000537877 PDCD11Q14690 1871 aaKnown RBP13.32□□□□□ -0.28
DDB1-209ENST00000537877 MEFVO15553 781 aaPredicted RBP13.32□□□□□ -0.28
DDB1-209ENST00000537877 PQBP1O60828 265 aaKnown RBP13.32□□□□□ -0.28
DDB1-209ENST00000537877 PARNO95453 639 aaKnown RBP13.32□□□□□ -0.28
DDB1-209ENST00000537877 VNN1O95497 513 aa13.32□□□□□ -0.28
DDB1-209ENST00000537877 NFICP08651 508 aa13.32□□□□□ -0.28
DDB1-209ENST00000537877 SKIP12755 728 aa13.32□□□□□ -0.28
DDB1-209ENST00000537877 ATN1P54259 1190 aaPredicted RBP13.32□□□□□ -0.28
DDB1-209ENST00000537877 JAM2P57087 298 aa13.32□□□□□ -0.28
DDB1-209ENST00000537877 NCOA4Q13772 614 aa13.32□□□□□ -0.28
DDB1-209ENST00000537877 RAPGEF1Q13905 1077 aa13.32□□□□□ -0.28
DDB1-209ENST00000537877 WDR44Q5JSH3 913 aa13.32□□□□□ -0.28
DDB1-209ENST00000537877 SFMBT2Q5VUG0 894 aa13.32□□□□□ -0.28
DDB1-209ENST00000537877 SMYD5Q6GMV2 418 aa13.32□□□□□ -0.28
DDB1-209ENST00000537877 IQCEQ6IPM2 695 aa13.32□□□□□ -0.28
DDB1-209ENST00000537877 PHLDB3Q6NSJ2 640 aa13.32□□□□□ -0.28
DDB1-209ENST00000537877 ENOSF1Q7L5Y1 443 aa13.32□□□□□ -0.28
DDB1-209ENST00000537877 TRAPPC11Q7Z392 1133 aa13.32□□□□□ -0.28
DDB1-209ENST00000537877 SMG8Q8ND04 991 aaKnown RBP13.32□□□□□ -0.28
DDB1-209ENST00000537877 STK33Q9BYT3 514 aa13.32□□□□□ -0.28
DDB1-209ENST00000537877 C11orf49Q9H6J7 331 aa13.32□□□□□ -0.28
DDB1-209ENST00000537877 DNAJC12Q9UKB3 198 aa13.32□□□□□ -0.28
DDB1-209ENST00000537877 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.32□□□□□ -0.28
DDB1-209ENST00000537877 XPOTO43592 962 aaKnown RBP13.31□□□□□ -0.28
DDB1-209ENST00000537877 ZNF623O75123 536 aa13.31□□□□□ -0.28
DDB1-209ENST00000537877 MSNP26038 577 aaKnown RBP13.31□□□□□ -0.28
DDB1-209ENST00000537877 STAT1P42224 750 aa13.31□□□□□ -0.28
DDB1-209ENST00000537877 MFAP3P55082 362 aa13.31□□□□□ -0.28
DDB1-209ENST00000537877 GCNT1Q02742 428 aa13.31□□□□□ -0.28
DDB1-209ENST00000537877 TRPC3Q13507 836 aa13.31□□□□□ -0.28
DDB1-209ENST00000537877 MBTPS1Q14703 1052 aa13.31□□□□□ -0.28
DDB1-209ENST00000537877 TRIM60Q495X7 471 aa13.31□□□□□ -0.28
DDB1-209ENST00000537877 XKR4Q5GH76 650 aa13.31□□□□□ -0.28
DDB1-209ENST00000537877 ARHGEF19Q8IW93 802 aa13.31□□□□□ -0.28
DDB1-209ENST00000537877 DIS3LQ8TF46 1054 aaKnown RBP13.31□□□□□ -0.28
DDB1-209ENST00000537877 KIF12Q96FN5 646 aa13.31□□□□□ -0.28
DDB1-209ENST00000537877 FTHL17Q9BXU8 183 aa13.31□□□□□ -0.28
DDB1-209ENST00000537877 IFIH1Q9BYX4 1025 aaKnown RBP13.31□□□□□ -0.28
DDB1-209ENST00000537877 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.31□□□□□ -0.28
DDB1-209ENST00000537877 AIPL1Q9NZN9 384 aa13.31□□□□□ -0.28
DDB1-209ENST00000537877 ITGA11Q9UKX5 1188 aa13.31□□□□□ -0.28
DDB1-209ENST00000537877 HES2Q9Y543 173 aa13.31□□□□□ -0.28
DDB1-209ENST00000537877 PCDHB2Q9Y5E7 798 aa13.31□□□□□ -0.28
DDB1-209ENST00000537877 PCNTO95613 3336 aa13.3□□□□□ -0.28
DDB1-209ENST00000537877 F8VZ95 297 aa13.3□□□□□ -0.28
DDB1-209ENST00000537877 ASS1P00966 412 aaKnown RBP13.3□□□□□ -0.28
DDB1-209ENST00000537877 ITGA4P13612 1032 aa13.3□□□□□ -0.28
DDB1-209ENST00000537877 KCNE1P15382 129 aa13.3□□□□□ -0.28
DDB1-209ENST00000537877 TBXAS1P24557 533 aaPredicted RBP13.3□□□□□ -0.28
DDB1-209ENST00000537877 NOP14P78316 857 aaKnown RBP13.3□□□□□ -0.28
DDB1-209ENST00000537877 TLE2Q04725 743 aa13.3□□□□□ -0.28
DDB1-209ENST00000537877 DRAP1Q14919 205 aaPredicted RBP13.3□□□□□ -0.28
DDB1-209ENST00000537877 ASIC2Q16515 512 aa13.3□□□□□ -0.28
DDB1-209ENST00000537877 GJB7Q6PEY0 223 aa13.3□□□□□ -0.28
DDB1-209ENST00000537877 WDR59Q6PJI9 974 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms