RNA–Protein interactions for RNA: ENST00000537849.1

SPARC-207, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 3

Gene SPARC, Length 218 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-207ENST00000537849 PDCD11Q14690 1871 aaKnown RBP12.68□□□□□ -0.38
SPARC-207ENST00000537849 TULP1O00294 542 aaPredicted RBP12.67□□□□□ -0.38
SPARC-207ENST00000537849 ZNF623O75123 536 aa12.67□□□□□ -0.38
SPARC-207ENST00000537849 HLA-DRAP01903 254 aa12.67□□□□□ -0.38
SPARC-207ENST00000537849 SELPP16109 830 aa12.67□□□□□ -0.38
SPARC-207ENST00000537849 BFSP2Q13515 415 aa12.67□□□□□ -0.38
SPARC-207ENST00000537849 ZBTB6Q15916 424 aa12.67□□□□□ -0.38
SPARC-207ENST00000537849 XKR4Q5GH76 650 aa12.67□□□□□ -0.38
SPARC-207ENST00000537849 IQCEQ6IPM2 695 aa12.67□□□□□ -0.38
SPARC-207ENST00000537849 PDXDC1Q6P996 788 aa12.67□□□□□ -0.38
SPARC-207ENST00000537849 ARHGEF19Q8IW93 802 aa12.67□□□□□ -0.38
SPARC-207ENST00000537849 CD302Q8IX05 232 aa12.67□□□□□ -0.38
SPARC-207ENST00000537849 CXorf38Q8TB03 319 aa12.67□□□□□ -0.38
SPARC-207ENST00000537849 TATDN2Q93075 761 aa12.67□□□□□ -0.38
SPARC-207ENST00000537849 PAWRQ96IZ0 340 aaKnown RBP12.67□□□□□ -0.38
SPARC-207ENST00000537849 TRAIPQ9BWF2 469 aa12.67□□□□□ -0.38
SPARC-207ENST00000537849 MCOLN1Q9GZU1 580 aa12.67□□□□□ -0.38
SPARC-207ENST00000537849 NXF3Q9H4D5 531 aaKnown RBP12.67□□□□□ -0.38
SPARC-207ENST00000537849 ABHD10Q9NUJ1 306 aa12.67□□□□□ -0.38
SPARC-207ENST00000537849 DNAJC12Q9UKB3 198 aa12.67□□□□□ -0.38
SPARC-207ENST00000537849 IPPQ9Y573 584 aa12.67□□□□□ -0.38
SPARC-207ENST00000537849 FHOD1Q9Y613 1164 aa12.67□□□□□ -0.38
SPARC-207ENST00000537849 SCN5AQ14524 2016 aa12.66□□□□□ -0.38
SPARC-207ENST00000537849 RALGAPA2Q2PPJ7 1873 aa12.66□□□□□ -0.38
SPARC-207ENST00000537849 TLR3O15455 904 aaKnown RBP12.66□□□□□ -0.38
SPARC-207ENST00000537849 PQBP1O60828 265 aaKnown RBP12.66□□□□□ -0.38
SPARC-207ENST00000537849 SKILP12757 684 aa12.66□□□□□ -0.38
SPARC-207ENST00000537849 ZSCAN20P17040 1043 aaPredicted RBP12.66□□□□□ -0.38
SPARC-207ENST00000537849 JAM2P57087 298 aa12.66□□□□□ -0.38
SPARC-207ENST00000537849 PAK2Q13177 524 aa12.66□□□□□ -0.38
SPARC-207ENST00000537849 MEA1Q16626 185 aa12.66□□□□□ -0.38
SPARC-207ENST00000537849 TRIM60Q495X7 471 aa12.66□□□□□ -0.38
SPARC-207ENST00000537849 E4F1Q66K89 784 aaPredicted RBP12.66□□□□□ -0.38
SPARC-207ENST00000537849 TWF2Q6IBS0 349 aaKnown RBP12.66□□□□□ -0.38
SPARC-207ENST00000537849 JADE1Q6IE81 842 aa12.66□□□□□ -0.38
SPARC-207ENST00000537849 LRRC8DQ7L1W4 858 aa12.66□□□□□ -0.38
SPARC-207ENST00000537849 RRAGAQ7L523 313 aa12.66□□□□□ -0.38
SPARC-207ENST00000537849 ZNF397Q8NF99 534 aaPredicted RBP12.66□□□□□ -0.38
SPARC-207ENST00000537849 HELQQ8TDG4 1101 aa12.66□□□□□ -0.38
SPARC-207ENST00000537849 SYN2Q92777 582 aaPredicted RBP12.66□□□□□ -0.38
SPARC-207ENST00000537849 SNX27Q96L92 541 aa12.66□□□□□ -0.38
SPARC-207ENST00000537849 ZMAT2Q96NC0 199 aaKnown RBP12.66□□□□□ -0.38
SPARC-207ENST00000537849 CHP1Q99653 195 aa12.66□□□□□ -0.38
SPARC-207ENST00000537849 BAG1Q99933 345 aaPredicted RBP12.66□□□□□ -0.38
SPARC-207ENST00000537849 TMEM106CQ9BVX2 250 aa12.66□□□□□ -0.38
SPARC-207ENST00000537849 STK33Q9BYT3 514 aa12.66□□□□□ -0.38
SPARC-207ENST00000537849 UBE2TQ9NPD8 197 aaPredicted RBP12.66□□□□□ -0.38
SPARC-207ENST00000537849 AIPL1Q9NZN9 384 aa12.66□□□□□ -0.38
SPARC-207ENST00000537849 APEX2Q9UBZ4 518 aa12.66□□□□□ -0.38
SPARC-207ENST00000537849 PYCARDQ9ULZ3 195 aa12.66□□□□□ -0.38
SPARC-207ENST00000537849 MYO6Q9UM54 1294 aa12.66□□□□□ -0.38
SPARC-207ENST00000537849 PLAGL2Q9UPG8 496 aa12.66□□□□□ -0.38
SPARC-207ENST00000537849 ZKSCAN5Q9Y2L8 839 aa12.66□□□□□ -0.38
SPARC-207ENST00000537849 DAAM1Q9Y4D1 1078 aa12.66□□□□□ -0.38
SPARC-207ENST00000537849 PCDHB2Q9Y5E7 798 aa12.66□□□□□ -0.38
SPARC-207ENST00000537849 DCDC2CA8MYV0 355 aa12.65□□□□□ -0.38
SPARC-207ENST00000537849 PITPNM1O00562 1244 aa12.65□□□□□ -0.38
SPARC-207ENST00000537849 NBNO60934 754 aa12.65□□□□□ -0.38
SPARC-207ENST00000537849 RECQL4O94761 1208 aa12.65□□□□□ -0.38
SPARC-207ENST00000537849 NFICP08651 508 aa12.65□□□□□ -0.38
SPARC-207ENST00000537849 AKAP5P24588 427 aa12.65□□□□□ -0.38
SPARC-207ENST00000537849 FAM189BP81408 668 aa12.65□□□□□ -0.38
SPARC-207ENST00000537849 TFAMQ00059 246 aaKnown RBP12.65□□□□□ -0.38
SPARC-207ENST00000537849 CDK17Q00537 523 aa12.65□□□□□ -0.38
SPARC-207ENST00000537849 CACNA2D4Q7Z3S7 1137 aa12.65□□□□□ -0.38
SPARC-207ENST00000537849 IRF2BP2Q7Z5L9 587 aa12.65□□□□□ -0.38
SPARC-207ENST00000537849 NT5DC4Q86YG4 428 aa12.65□□□□□ -0.38
SPARC-207ENST00000537849 TMEM130Q8N3G9 435 aa12.65□□□□□ -0.38
SPARC-207ENST00000537849 CCDC112Q8NEF3 446 aa12.65□□□□□ -0.38
SPARC-207ENST00000537849 ELMO3Q96BJ8 720 aa12.65□□□□□ -0.38
SPARC-207ENST00000537849 ANKRD36BP1Q96IX9 119 aa12.65□□□□□ -0.38
SPARC-207ENST00000537849 KREMEN1Q96MU8 473 aa12.65□□□□□ -0.38
SPARC-207ENST00000537849 ADAM2Q99965 735 aa12.65□□□□□ -0.38
SPARC-207ENST00000537849 PI4K2AQ9BTU6 479 aa12.65□□□□□ -0.38
SPARC-207ENST00000537849 TRIM6Q9C030 488 aaPredicted RBP12.65□□□□□ -0.38
SPARC-207ENST00000537849 MTMR12Q9C0I1 747 aa12.65□□□□□ -0.38
SPARC-207ENST00000537849 GPR88Q9GZN0 384 aa12.65□□□□□ -0.38
SPARC-207ENST00000537849 NUCKS1Q9H1E3 243 aaKnown RBP12.65□□□□□ -0.38
SPARC-207ENST00000537849 C11orf49Q9H6J7 331 aa12.65□□□□□ -0.38
SPARC-207ENST00000537849 FAM105AQ9NUU6 356 aa12.65□□□□□ -0.38
SPARC-207ENST00000537849 SIX4Q9UIU6 781 aa12.65□□□□□ -0.38
SPARC-207ENST00000537849 DERAQ9Y315 318 aa12.65□□□□□ -0.38
SPARC-207ENST00000537849 C2CD2Q9Y426 696 aa12.65□□□□□ -0.38
SPARC-207ENST00000537849 SCN1AP35498 2009 aa12.65□□□□□ -0.38
SPARC-207ENST00000537849 UMODL1Q5DID0 1318 aa12.64□□□□□ -0.39
SPARC-207ENST00000537849 A0A0U1RQF3 1178 aa12.64□□□□□ -0.39
SPARC-207ENST00000537849 SMIM28A0A1B0GU29 152 aa12.64□□□□□ -0.39
SPARC-207ENST00000537849 LRRC53A6NM62 1247 aa12.64□□□□□ -0.39
SPARC-207ENST00000537849 FOXN3O00409 490 aaPredicted RBP12.64□□□□□ -0.39
SPARC-207ENST00000537849 ZC3H11AO75152 810 aaKnown RBP eCLIP12.64□□□□□ -0.39
SPARC-207ENST00000537849 PHACTR2O75167 634 aa12.64□□□□□ -0.39
SPARC-207ENST00000537849 TNNC2P02585 160 aa12.64□□□□□ -0.39
SPARC-207ENST00000537849 KCNE1P15382 129 aa12.64□□□□□ -0.39
SPARC-207ENST00000537849 YARSP54577 528 aaKnown RBP12.64□□□□□ -0.39
SPARC-207ENST00000537849 MYL6P60660 151 aa12.64□□□□□ -0.39
SPARC-207ENST00000537849 BIRC3Q13489 604 aa12.64□□□□□ -0.39
SPARC-207ENST00000537849 NCOA4Q13772 614 aa12.64□□□□□ -0.39
SPARC-207ENST00000537849 DRAP1Q14919 205 aaPredicted RBP12.64□□□□□ -0.39
SPARC-207ENST00000537849 TMEM132DQ14C87 1099 aa12.64□□□□□ -0.39
SPARC-207ENST00000537849 LRRC26Q2I0M4 334 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms