RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 ZNF541Q9H0D2 1346 aa11.54□□□□□ -0.56
CLSTN3-207ENST00000537408 MYH7BA7E2Y1 1941 aa11.54□□□□□ -0.56
CLSTN3-207ENST00000537408 DYTNA2CJ06 578 aa11.54□□□□□ -0.56
CLSTN3-207ENST00000537408 KLRG2A4D1S0 409 aaPredicted RBP11.54□□□□□ -0.56
CLSTN3-207ENST00000537408 TRAFD1O14545 582 aaPredicted RBP11.54□□□□□ -0.56
CLSTN3-207ENST00000537408 PLCB3Q01970 1234 aa11.54□□□□□ -0.56
CLSTN3-207ENST00000537408 AUHQ13825 339 aaKnown RBP11.54□□□□□ -0.56
CLSTN3-207ENST00000537408 ZNF174Q15697 407 aa11.54□□□□□ -0.56
CLSTN3-207ENST00000537408 VWA3BQ502W6 1294 aa11.54□□□□□ -0.56
CLSTN3-207ENST00000537408 SPDYAQ5MJ70 313 aa11.54□□□□□ -0.56
CLSTN3-207ENST00000537408 MFSD5Q6N075 450 aa11.54□□□□□ -0.56
CLSTN3-207ENST00000537408 RGMBQ6NW40 437 aa11.54□□□□□ -0.56
CLSTN3-207ENST00000537408 ERP44Q9BS26 406 aa11.54□□□□□ -0.56
CLSTN3-207ENST00000537408 CARD8Q9Y2G2 431 aa11.54□□□□□ -0.56
CLSTN3-207ENST00000537408 STARD13Q9Y3M8 1113 aa11.54□□□□□ -0.56
CLSTN3-207ENST00000537408 RGPD2P0DJD1 1756 aa11.53□□□□□ -0.56
CLSTN3-207ENST00000537408 MANSC4A6NHS7 340 aaPredicted RBP11.53□□□□□ -0.56
CLSTN3-207ENST00000537408 CALM1P0DP23 149 aa11.53□□□□□ -0.56
CLSTN3-207ENST00000537408 CALM2P0DP24 149 aa11.53□□□□□ -0.56
CLSTN3-207ENST00000537408 CALM3P0DP25 149 aa11.53□□□□□ -0.56
CLSTN3-207ENST00000537408 PPIDQ08752 370 aaKnown RBP11.53□□□□□ -0.56
CLSTN3-207ENST00000537408 CERKLQ49MI3 558 aaPredicted RBP11.53□□□□□ -0.56
CLSTN3-207ENST00000537408 TTC38Q5R3I4 469 aa11.53□□□□□ -0.56
CLSTN3-207ENST00000537408 USP6NLQ92738 828 aa11.53□□□□□ -0.56
CLSTN3-207ENST00000537408 RNF25Q96BH1 459 aaPredicted RBP11.53□□□□□ -0.56
CLSTN3-207ENST00000537408 CCDC17Q96LX7 622 aa11.53□□□□□ -0.56
CLSTN3-207ENST00000537408 SPZ1Q9BXG8 430 aa11.53□□□□□ -0.56
CLSTN3-207ENST00000537408 CELF4Q9BZC1 486 aaKnown RBP11.53□□□□□ -0.56
CLSTN3-207ENST00000537408 NDEL1Q9GZM8 345 aa11.53□□□□□ -0.56
CLSTN3-207ENST00000537408 NLRC4Q9NPP4 1024 aa11.53□□□□□ -0.56
CLSTN3-207ENST00000537408 TDRKHQ9Y2W6 561 aaKnown RBP11.53□□□□□ -0.56
CLSTN3-207ENST00000537408 RABGAP1Q9Y3P9 1069 aa11.53□□□□□ -0.56
CLSTN3-207ENST00000537408 FZD9O00144 591 aa11.53□□□□□ -0.56
CLSTN3-207ENST00000537408 KDM1AO60341 852 aa11.53□□□□□ -0.56
CLSTN3-207ENST00000537408 KRT13P13646 458 aa11.53□□□□□ -0.56
CLSTN3-207ENST00000537408 MCAMP43121 646 aa11.53□□□□□ -0.56
CLSTN3-207ENST00000537408 SNAPC2Q13487 334 aa11.53□□□□□ -0.56
CLSTN3-207ENST00000537408 RASSF3Q86WH2 238 aa11.53□□□□□ -0.56
CLSTN3-207ENST00000537408 KCNN1Q92952 543 aa11.53□□□□□ -0.56
CLSTN3-207ENST00000537408 SERPINB12Q96P63 405 aa11.53□□□□□ -0.56
CLSTN3-207ENST00000537408 DHX34Q14147 1143 aaKnown RBP11.53□□□□□ -0.56
CLSTN3-207ENST00000537408 ZYXQ15942 572 aaKnown RBP11.53□□□□□ -0.56
CLSTN3-207ENST00000537408 MAP3K21Q5TCX8 1036 aa11.53□□□□□ -0.56
CLSTN3-207ENST00000537408 NRG4Q8WWG1 115 aa11.53□□□□□ -0.56
CLSTN3-207ENST00000537408 CCDC77Q9BR77 488 aa11.53□□□□□ -0.56
CLSTN3-207ENST00000537408 BTBD10Q9BSF8 475 aa11.53□□□□□ -0.56
CLSTN3-207ENST00000537408 ITM2BQ9Y287 266 aa11.53□□□□□ -0.56
CLSTN3-207ENST00000537408 GOLGA8TH3BQL2 631 aa11.52□□□□□ -0.56
CLSTN3-207ENST00000537408 RBAK-RBAKDNI3L0D1 243 aa11.52□□□□□ -0.56
CLSTN3-207ENST00000537408 TXNDC9O14530 226 aa11.52□□□□□ -0.56
CLSTN3-207ENST00000537408 TBX10O75333 385 aa11.52□□□□□ -0.56
CLSTN3-207ENST00000537408 CBX6O95503 412 aa11.52□□□□□ -0.56
CLSTN3-207ENST00000537408 GOLGA8HP0CJ92 632 aa11.52□□□□□ -0.56
CLSTN3-207ENST00000537408 RPL5P46777 297 aaKnown RBP11.52□□□□□ -0.56
CLSTN3-207ENST00000537408 ARFIP2P53365 341 aa11.52□□□□□ -0.56
CLSTN3-207ENST00000537408 PSMC1P62191 440 aaKnown RBP11.52□□□□□ -0.56
CLSTN3-207ENST00000537408 DMPKQ09013 629 aa11.52□□□□□ -0.56
CLSTN3-207ENST00000537408 THOC5Q13769 683 aaKnown RBP11.52□□□□□ -0.56
CLSTN3-207ENST00000537408 MAN2A1Q16706 1144 aa11.52□□□□□ -0.56
CLSTN3-207ENST00000537408 SLC2A7Q6PXP3 512 aa11.52□□□□□ -0.56
CLSTN3-207ENST00000537408 RBM44Q6ZP01 1051 aaKnown RBP11.52□□□□□ -0.56
CLSTN3-207ENST00000537408 ATG9AQ7Z3C6 839 aa11.52□□□□□ -0.56
CLSTN3-207ENST00000537408 SATL1Q86VE3 508 aa11.52□□□□□ -0.56
CLSTN3-207ENST00000537408 CCDC25Q86WR0 208 aa11.52□□□□□ -0.56
CLSTN3-207ENST00000537408 ZBED8Q8IZ13 594 aa11.52□□□□□ -0.56
CLSTN3-207ENST00000537408 USP33Q8TEY7 942 aa11.52□□□□□ -0.56
CLSTN3-207ENST00000537408 OSBP2Q969R2 916 aa11.52□□□□□ -0.56
CLSTN3-207ENST00000537408 ITPKCQ96DU7 683 aa11.52□□□□□ -0.56
CLSTN3-207ENST00000537408 CAPNS2Q96L46 248 aa11.52□□□□□ -0.56
CLSTN3-207ENST00000537408 CETPP11597 493 aa11.52□□□□□ -0.57
CLSTN3-207ENST00000537408 ADD2P35612 726 aa11.52□□□□□ -0.57
CLSTN3-207ENST00000537408 KLHL30Q0D2K2 578 aa11.52□□□□□ -0.57
CLSTN3-207ENST00000537408 TTI2Q6NXR4 508 aa11.52□□□□□ -0.57
CLSTN3-207ENST00000537408 ANKRD35Q8N283 1001 aa11.52□□□□□ -0.57
CLSTN3-207ENST00000537408 SYT2Q8N9I0 419 aaPredicted RBP11.52□□□□□ -0.57
CLSTN3-207ENST00000537408 SEC14L1Q92503 715 aa11.52□□□□□ -0.57
CLSTN3-207ENST00000537408 VTI1AQ96AJ9 217 aa11.52□□□□□ -0.57
CLSTN3-207ENST00000537408 COA7Q96BR5 231 aa11.52□□□□□ -0.57
CLSTN3-207ENST00000537408 CDCA5Q96FF9 252 aa11.52□□□□□ -0.57
CLSTN3-207ENST00000537408 ELP3Q9H9T3 547 aa11.52□□□□□ -0.57
CLSTN3-207ENST00000537408 SNX24Q9Y343 169 aa11.52□□□□□ -0.57
CLSTN3-207ENST00000537408 MYH7P12883 1935 aa11.52□□□□□ -0.57
CLSTN3-207ENST00000537408 FAM196BA6NMK8 535 aa11.52□□□□□ -0.57
CLSTN3-207ENST00000537408 WNT7AO00755 349 aa11.52□□□□□ -0.57
CLSTN3-207ENST00000537408 SPAG7O75391 227 aa11.52□□□□□ -0.57
CLSTN3-207ENST00000537408 GAS8O95995 478 aa11.52□□□□□ -0.57
CLSTN3-207ENST00000537408 STIP1P31948 543 aaKnown RBP11.52□□□□□ -0.57
CLSTN3-207ENST00000537408 IRX4P78413 519 aa11.52□□□□□ -0.57
CLSTN3-207ENST00000537408 ZBTB16Q05516 673 aa11.52□□□□□ -0.57
CLSTN3-207ENST00000537408 LPIN1Q14693 890 aa11.52□□□□□ -0.57
CLSTN3-207ENST00000537408 ASIC2Q16515 512 aa11.52□□□□□ -0.57
CLSTN3-207ENST00000537408 KIAA1755Q5JYT7 1200 aa11.52□□□□□ -0.57
CLSTN3-207ENST00000537408 PDXDC2PQ6P474 469 aa11.52□□□□□ -0.57
CLSTN3-207ENST00000537408 CCT7Q99832 543 aa11.52□□□□□ -0.57
CLSTN3-207ENST00000537408 MYL10Q9BUA6 226 aa11.52□□□□□ -0.57
CLSTN3-207ENST00000537408 RTFDC1Q9BY42 306 aaPredicted RBP11.52□□□□□ -0.57
CLSTN3-207ENST00000537408 TXLNGYQ9BZA5 131 aa11.52□□□□□ -0.57
CLSTN3-207ENST00000537408 LRRC27Q9C0I9 530 aa11.52□□□□□ -0.57
CLSTN3-207ENST00000537408 Q9H521 79 aa11.52□□□□□ -0.57
CLSTN3-207ENST00000537408 PLGRKTQ9HBL7 147 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms