RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 SEMA4AQ9H3S1 761 aa14.5□□□□□ -0.09
CLSTN3-205ENST00000535452 TBC1D17Q9HA65 648 aa14.5□□□□□ -0.09
CLSTN3-205ENST00000535452 KCNH3Q9ULD8 1083 aa14.5□□□□□ -0.09
CLSTN3-205ENST00000535452 SIT1Q9Y3P8 196 aa14.5□□□□□ -0.09
CLSTN3-205ENST00000535452 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.5□□□□□ -0.09
CLSTN3-205ENST00000535452 BACE2Q9Y5Z0 518 aa14.5□□□□□ -0.09
CLSTN3-205ENST00000535452 NUMBLQ9Y6R0 609 aa14.5□□□□□ -0.09
CLSTN3-205ENST00000535452 E9PMD0 336 aa14.49□□□□□ -0.09
CLSTN3-205ENST00000535452 PODXLO00592 558 aa14.49□□□□□ -0.09
CLSTN3-205ENST00000535452 ZNF197O14709 1029 aa14.49□□□□□ -0.09
CLSTN3-205ENST00000535452 SYN3O14994 580 aa14.49□□□□□ -0.09
CLSTN3-205ENST00000535452 CLDN3O15551 220 aa14.49□□□□□ -0.09
CLSTN3-205ENST00000535452 EFEMP2O95967 443 aa14.49□□□□□ -0.09
CLSTN3-205ENST00000535452 BMP15O95972 392 aa14.49□□□□□ -0.09
CLSTN3-205ENST00000535452 UBA7P41226 1012 aa14.49□□□□□ -0.09
CLSTN3-205ENST00000535452 NBL1P41271 181 aa14.49□□□□□ -0.09
CLSTN3-205ENST00000535452 ARPP19P56211 112 aa14.49□□□□□ -0.09
CLSTN3-205ENST00000535452 ANGPT1Q15389 498 aa14.49□□□□□ -0.09
CLSTN3-205ENST00000535452 SPECC1Q5M775 1068 aa14.49□□□□□ -0.09
CLSTN3-205ENST00000535452 CYP4A22Q5TCH4 519 aa14.49□□□□□ -0.09
CLSTN3-205ENST00000535452 EEF1DP3Q658K8 133 aa14.49□□□□□ -0.09
CLSTN3-205ENST00000535452 ZNF280DQ6N043 979 aa14.49□□□□□ -0.09
CLSTN3-205ENST00000535452 USP37Q86T82 979 aa14.49□□□□□ -0.09
CLSTN3-205ENST00000535452 RSAD2Q8WXG1 361 aa14.49□□□□□ -0.09
CLSTN3-205ENST00000535452 PHOX2BQ99453 314 aa14.49□□□□□ -0.09
CLSTN3-205ENST00000535452 ACO2Q99798 780 aaKnown RBP14.49□□□□□ -0.09
CLSTN3-205ENST00000535452 BCO2Q9BYV7 579 aa14.49□□□□□ -0.09
CLSTN3-205ENST00000535452 MTRRQ9UBK8 725 aa14.49□□□□□ -0.09
CLSTN3-205ENST00000535452 CACNG4Q9UBN1 327 aa14.49□□□□□ -0.09
CLSTN3-205ENST00000535452 SMC3Q9UQE7 1217 aa14.49□□□□□ -0.09
CLSTN3-205ENST00000535452 MRPS17Q9Y2R5 130 aaKnown RBP14.49□□□□□ -0.09
CLSTN3-205ENST00000535452 PCDHB6Q9Y5E3 794 aa14.49□□□□□ -0.09
CLSTN3-205ENST00000535452 C5orf42Q9H799 3197 aa14.49□□□□□ -0.09
CLSTN3-205ENST00000535452 SMIM28A0A1B0GU29 152 aa14.48□□□□□ -0.09
CLSTN3-205ENST00000535452 ARHGEF37A1IGU5 675 aa14.48□□□□□ -0.09
CLSTN3-205ENST00000535452 VWA3AA6NCI4 1184 aa14.48□□□□□ -0.09
CLSTN3-205ENST00000535452 NARSO43776 548 aaKnown RBP14.48□□□□□ -0.09
CLSTN3-205ENST00000535452 TOM1L1O75674 476 aa14.48□□□□□ -0.09
CLSTN3-205ENST00000535452 SEC24BO95487 1268 aa14.48□□□□□ -0.09
CLSTN3-205ENST00000535452 POU2F2P09086 479 aa14.48□□□□□ -0.09
CLSTN3-205ENST00000535452 PTPN2P17706 415 aa14.48□□□□□ -0.09
CLSTN3-205ENST00000535452 FGFR3P22607 806 aa14.48□□□□□ -0.09
CLSTN3-205ENST00000535452 NBR1Q14596 966 aa14.48□□□□□ -0.09
CLSTN3-205ENST00000535452 NOLC1Q14978 699 aaKnown RBP eCLIP14.48□□□□□ -0.09
CLSTN3-205ENST00000535452 UPP1Q16831 310 aa14.48□□□□□ -0.09
CLSTN3-205ENST00000535452 NT5DC1Q5TFE4 455 aa14.48□□□□□ -0.09
CLSTN3-205ENST00000535452 CWF19L1Q69YN2 538 aaKnown RBP14.48□□□□□ -0.09
CLSTN3-205ENST00000535452 PHLDB3Q6NSJ2 640 aa14.48□□□□□ -0.09
CLSTN3-205ENST00000535452 RINT1Q6NUQ1 792 aa14.48□□□□□ -0.09
CLSTN3-205ENST00000535452 GPR152Q8TDT2 470 aa14.48□□□□□ -0.09
CLSTN3-205ENST00000535452 AK8Q96MA6 479 aa14.48□□□□□ -0.09
CLSTN3-205ENST00000535452 PPP1R10Q96QC0 940 aaKnown RBP14.48□□□□□ -0.09
CLSTN3-205ENST00000535452 TARS2Q9BW92 718 aaKnown RBP14.48□□□□□ -0.09
CLSTN3-205ENST00000535452 OXCT2Q9BYC2 517 aaPredicted RBP14.48□□□□□ -0.09
CLSTN3-205ENST00000535452 CYP4F11Q9HBI6 524 aa14.48□□□□□ -0.09
CLSTN3-205ENST00000535452 SLC2A4RGQ9NR83 387 aa14.48□□□□□ -0.09
CLSTN3-205ENST00000535452 KMT2EQ8IZD2 1858 aa14.48□□□□□ -0.09
CLSTN3-205ENST00000535452 ZDBF2Q9HCK1 2354 aa14.47□□□□□ -0.09
CLSTN3-205ENST00000535452 PROB1E7EW31 1015 aa14.47□□□□□ -0.09
CLSTN3-205ENST00000535452 SLC16A4O15374 487 aa14.47□□□□□ -0.09
CLSTN3-205ENST00000535452 SLC26A4O43511 780 aa14.47□□□□□ -0.09
CLSTN3-205ENST00000535452 TBCAO75347 108 aaKnown RBP14.47□□□□□ -0.09
CLSTN3-205ENST00000535452 PLS3P13797 630 aa14.47□□□□□ -0.09
CLSTN3-205ENST00000535452 CPB1P15086 417 aa14.47□□□□□ -0.09
CLSTN3-205ENST00000535452 GUCY2CP25092 1073 aa14.47□□□□□ -0.09
CLSTN3-205ENST00000535452 LIG4P49917 911 aa14.47□□□□□ -0.09
CLSTN3-205ENST00000535452 PRKCQQ04759 706 aa14.47□□□□□ -0.09
CLSTN3-205ENST00000535452 PPP2R3AQ06190 1150 aa14.47□□□□□ -0.09
CLSTN3-205ENST00000535452 ST3GAL1Q11201 340 aa14.47□□□□□ -0.09
CLSTN3-205ENST00000535452 HTR4Q13639 388 aa14.47□□□□□ -0.09
CLSTN3-205ENST00000535452 CTXN3Q4LDR2 81 aa14.47□□□□□ -0.09
CLSTN3-205ENST00000535452 ARL6IP4Q66PJ3 421 aaKnown RBP14.47□□□□□ -0.09
CLSTN3-205ENST00000535452 ZNF461Q8TAF7 563 aa14.47□□□□□ -0.09
CLSTN3-205ENST00000535452 SPIRE2Q8WWL2 714 aa14.47□□□□□ -0.09
CLSTN3-205ENST00000535452 FGF13Q92913 245 aa14.47□□□□□ -0.09
CLSTN3-205ENST00000535452 ZNF512Q96ME7 567 aaPredicted RBP14.47□□□□□ -0.09
CLSTN3-205ENST00000535452 CDT1Q9H211 546 aa14.47□□□□□ -0.09
CLSTN3-205ENST00000535452 ZHX3Q9H4I2 956 aa14.47□□□□□ -0.09
CLSTN3-205ENST00000535452 POLD4Q9HCU8 107 aa14.47□□□□□ -0.09
CLSTN3-205ENST00000535452 GDE1Q9NZC3 331 aa14.47□□□□□ -0.09
CLSTN3-205ENST00000535452 USP20Q9Y2K6 914 aa14.47□□□□□ -0.09
CLSTN3-205ENST00000535452 DENND4AQ7Z401 1863 aa14.46□□□□□ -0.09
CLSTN3-205ENST00000535452 TTLL13PA6NNM8 815 aa14.46□□□□□ -0.09
CLSTN3-205ENST00000535452 ANHXE9PGG2 379 aa14.46□□□□□ -0.09
CLSTN3-205ENST00000535452 FAM13AO94988 1023 aa14.46□□□□□ -0.09
CLSTN3-205ENST00000535452 TKTP29401 623 aaKnown RBP14.46□□□□□ -0.09
CLSTN3-205ENST00000535452 MAGEA9P43362 315 aa14.46□□□□□ -0.09
CLSTN3-205ENST00000535452 RAD51AP2Q09MP3 1159 aa14.46□□□□□ -0.09
CLSTN3-205ENST00000535452 PLD1Q13393 1074 aa14.46□□□□□ -0.09
CLSTN3-205ENST00000535452 PPP2R5DQ14738 602 aa14.46□□□□□ -0.09
CLSTN3-205ENST00000535452 VARS2Q5ST30 1063 aaKnown RBP14.46□□□□□ -0.09
CLSTN3-205ENST00000535452 TPGS2Q68CL5 300 aa14.46□□□□□ -0.09
CLSTN3-205ENST00000535452 ZPBP2Q6X784 338 aa14.46□□□□□ -0.09
CLSTN3-205ENST00000535452 PDZD4Q76G19 769 aaPredicted RBP14.46□□□□□ -0.09
CLSTN3-205ENST00000535452 FRMD5Q7Z6J6 570 aa14.46□□□□□ -0.09
CLSTN3-205ENST00000535452 LEMD2Q8NC56 503 aa14.46□□□□□ -0.09
CLSTN3-205ENST00000535452 SNX27Q96L92 541 aa14.46□□□□□ -0.09
CLSTN3-205ENST00000535452 NELL2Q99435 816 aa14.46□□□□□ -0.09
CLSTN3-205ENST00000535452 PLEKHA5Q9HAU0 1116 aa14.46□□□□□ -0.09
CLSTN3-205ENST00000535452 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms