RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 TOM1L1O75674 476 aa17.72■□□□□ 0.43
CLSTN3-204ENST00000535313 FGFR3P22607 806 aa17.72■□□□□ 0.43
CLSTN3-204ENST00000535313 PROZP22891 400 aa17.72■□□□□ 0.43
CLSTN3-204ENST00000535313 NUBP1P53384 320 aa17.72■□□□□ 0.43
CLSTN3-204ENST00000535313 XKR4Q5GH76 650 aa17.72■□□□□ 0.43
CLSTN3-204ENST00000535313 PPM1LQ5SGD2 360 aa17.72■□□□□ 0.43
CLSTN3-204ENST00000535313 BRAPQ7Z569 592 aa17.72■□□□□ 0.43
CLSTN3-204ENST00000535313 RASSF8Q8NHQ8 419 aa17.72■□□□□ 0.43
CLSTN3-204ENST00000535313 SNX27Q96L92 541 aa17.72■□□□□ 0.43
CLSTN3-204ENST00000535313 GOLGA2P5Q9HBQ8 144 aa17.72■□□□□ 0.43
CLSTN3-204ENST00000535313 LARSQ9P2J5 1176 aaKnown RBP17.72■□□□□ 0.43
CLSTN3-204ENST00000535313 ANKFY1Q9P2R3 1169 aa17.72■□□□□ 0.43
CLSTN3-204ENST00000535313 EPS15L1Q9UBC2 864 aa17.72■□□□□ 0.43
CLSTN3-204ENST00000535313 DUSP12Q9UNI6 340 aa17.72■□□□□ 0.43
CLSTN3-204ENST00000535313 HNRNPA1P09651 372 aaKnown RBP eCLIP17.71■□□□□ 0.43
CLSTN3-204ENST00000535313 MAPTP10636 758 aaKnown RBP17.71■□□□□ 0.43
CLSTN3-204ENST00000535313 KCNE1P15382 129 aa17.71■□□□□ 0.43
CLSTN3-204ENST00000535313 MRE11P49959 708 aa17.71■□□□□ 0.43
CLSTN3-204ENST00000535313 RAB33AQ14088 237 aa17.71■□□□□ 0.43
CLSTN3-204ENST00000535313 NOLC1Q14978 699 aaKnown RBP eCLIP17.71■□□□□ 0.43
CLSTN3-204ENST00000535313 ANKS3Q6ZW76 656 aa17.71■□□□□ 0.43
CLSTN3-204ENST00000535313 GET4Q7L5D6 327 aaPredicted RBP17.71■□□□□ 0.43
CLSTN3-204ENST00000535313 NXPE3Q969Y0 559 aa17.71■□□□□ 0.43
CLSTN3-204ENST00000535313 MYADMQ96S97 322 aa17.71■□□□□ 0.43
CLSTN3-204ENST00000535313 IRF2BPLQ9H1B7 796 aa17.71■□□□□ 0.43
CLSTN3-204ENST00000535313 MTRRQ9UBK8 725 aa17.71■□□□□ 0.43
CLSTN3-204ENST00000535313 FBXL21Q9UKT6 434 aa17.71■□□□□ 0.43
CLSTN3-204ENST00000535313 CACNA1HO95180 2353 aa17.71■□□□□ 0.42
CLSTN3-204ENST00000535313 TRIP11Q15643 1979 aa17.7■□□□□ 0.42
CLSTN3-204ENST00000535313 KMT2EQ8IZD2 1858 aa17.7■□□□□ 0.42
CLSTN3-204ENST00000535313 NPHP3-ACAD11A0A0J9YXS1 232 aa17.7■□□□□ 0.42
CLSTN3-204ENST00000535313 PODXLO00592 558 aa17.7■□□□□ 0.42
CLSTN3-204ENST00000535313 ABLIM1O14639 778 aa17.7■□□□□ 0.42
CLSTN3-204ENST00000535313 CLDN3O15551 220 aa17.7■□□□□ 0.42
CLSTN3-204ENST00000535313 ADAM12O43184 909 aa17.7■□□□□ 0.42
CLSTN3-204ENST00000535313 XYLBO75191 536 aa17.7■□□□□ 0.42
CLSTN3-204ENST00000535313 C8AP07357 584 aa17.7■□□□□ 0.42
CLSTN3-204ENST00000535313 HOXA9P31269 272 aa17.7■□□□□ 0.42
CLSTN3-204ENST00000535313 OR1D2P34982 312 aa17.7■□□□□ 0.42
CLSTN3-204ENST00000535313 MATR3P43243 847 aaKnown RBP eCLIP17.7■□□□□ 0.42
CLSTN3-204ENST00000535313 CACNB1Q02641 598 aaPredicted RBP17.7■□□□□ 0.42
CLSTN3-204ENST00000535313 SOX4Q06945 474 aaPredicted RBP17.7■□□□□ 0.42
CLSTN3-204ENST00000535313 TCF15Q12870 199 aa17.7■□□□□ 0.42
CLSTN3-204ENST00000535313 ASTLQ6HA08 431 aaPredicted RBP17.7■□□□□ 0.42
CLSTN3-204ENST00000535313 CD300LGQ6UXG3 332 aa17.7■□□□□ 0.42
CLSTN3-204ENST00000535313 ZPBP2Q6X784 338 aa17.7■□□□□ 0.42
CLSTN3-204ENST00000535313 BICD1Q96G01 975 aa17.7■□□□□ 0.42
CLSTN3-204ENST00000535313 ZBTB45Q96K62 511 aaPredicted RBP17.7■□□□□ 0.42
CLSTN3-204ENST00000535313 ZMAT2Q96NC0 199 aaKnown RBP17.7■□□□□ 0.42
CLSTN3-204ENST00000535313 CNTN3Q9P232 1028 aa17.7■□□□□ 0.42
CLSTN3-204ENST00000535313 ODF2LQ9ULJ1 636 aa17.7■□□□□ 0.42
CLSTN3-204ENST00000535313 BACE2Q9Y5Z0 518 aa17.7■□□□□ 0.42
CLSTN3-204ENST00000535313 VPS37CA5D8V6 355 aaPredicted RBP17.69■□□□□ 0.42
CLSTN3-204ENST00000535313 I3L4J1 428 aa17.69■□□□□ 0.42
CLSTN3-204ENST00000535313 LAMP2P13473 410 aa17.69■□□□□ 0.42
CLSTN3-204ENST00000535313 PDCP20941 246 aa17.69■□□□□ 0.42
CLSTN3-204ENST00000535313 FSHRP23945 695 aa17.69■□□□□ 0.42
CLSTN3-204ENST00000535313 IGFBP6P24592 240 aaPredicted RBP17.69■□□□□ 0.42
CLSTN3-204ENST00000535313 TKTP29401 623 aaKnown RBP17.69■□□□□ 0.42
CLSTN3-204ENST00000535313 RPL9P32969 192 aaKnown RBP17.69■□□□□ 0.42
CLSTN3-204ENST00000535313 LONP1P36776 959 aaKnown RBP17.69■□□□□ 0.42
CLSTN3-204ENST00000535313 BRCC3P46736 316 aa17.69■□□□□ 0.42
CLSTN3-204ENST00000535313 DHX8Q14562 1220 aaKnown RBP17.69■□□□□ 0.42
CLSTN3-204ENST00000535313 UVSSAQ2YD98 709 aa17.69■□□□□ 0.42
CLSTN3-204ENST00000535313 ARSHQ5FYA8 562 aa17.69■□□□□ 0.42
CLSTN3-204ENST00000535313 AXDND1Q5T1B0 1012 aaPredicted RBP17.69■□□□□ 0.42
CLSTN3-204ENST00000535313 GRASPQ7Z6J2 395 aaPredicted RBP17.69■□□□□ 0.42
CLSTN3-204ENST00000535313 GPBP1Q86WP2 473 aa17.69■□□□□ 0.42
CLSTN3-204ENST00000535313 C3orf58Q8NDZ4 430 aa17.69■□□□□ 0.42
CLSTN3-204ENST00000535313 SLC7A14Q8TBB6 771 aa17.69■□□□□ 0.42
CLSTN3-204ENST00000535313 POLIQ9UNA4 740 aa17.69■□□□□ 0.42
CLSTN3-204ENST00000535313 NUB1Q9Y5A7 615 aa17.69■□□□□ 0.42
CLSTN3-204ENST00000535313 CDY1Q9Y6F8 540 aa17.69■□□□□ 0.42
CLSTN3-204ENST00000535313 ZFP37Q9Y6Q3 630 aaPredicted RBP17.69■□□□□ 0.42
CLSTN3-204ENST00000535313 MYH11P35749 1972 aa17.68■□□□□ 0.42
CLSTN3-204ENST00000535313 CCL16O15467 120 aa17.68■□□□□ 0.42
CLSTN3-204ENST00000535313 FAM13AO94988 1023 aa17.68■□□□□ 0.42
CLSTN3-204ENST00000535313 KRT18P05783 430 aaKnown RBP17.68■□□□□ 0.42
CLSTN3-204ENST00000535313 SCP2P22307 547 aa17.68■□□□□ 0.42
CLSTN3-204ENST00000535313 CLCN5P51795 746 aa17.68■□□□□ 0.42
CLSTN3-204ENST00000535313 NCKAP1LP55160 1127 aa17.68■□□□□ 0.42
CLSTN3-204ENST00000535313 MCL1Q07820 350 aa17.68■□□□□ 0.42
CLSTN3-204ENST00000535313 CUL4AQ13619 759 aa17.68■□□□□ 0.42
CLSTN3-204ENST00000535313 SF3A1Q15459 793 aaKnown RBP17.68■□□□□ 0.42
CLSTN3-204ENST00000535313 RTL10Q7L3V2 364 aa17.68■□□□□ 0.42
CLSTN3-204ENST00000535313 MYCT1Q8N699 235 aa17.68■□□□□ 0.42
CLSTN3-204ENST00000535313 FLCNQ8NFG4 579 aa17.68■□□□□ 0.42
CLSTN3-204ENST00000535313 RSAD2Q8WXG1 361 aa17.68■□□□□ 0.42
CLSTN3-204ENST00000535313 C18orf25Q96B23 403 aaPredicted RBP17.68■□□□□ 0.42
CLSTN3-204ENST00000535313 REEP2Q9BRK0 252 aa17.68■□□□□ 0.42
CLSTN3-204ENST00000535313 VWA8A3KMH1 1905 aa17.68■□□□□ 0.42
CLSTN3-204ENST00000535313 SYN3O14994 580 aa17.67■□□□□ 0.42
CLSTN3-204ENST00000535313 GALR2O43603 387 aaPredicted RBP17.67■□□□□ 0.42
CLSTN3-204ENST00000535313 PLCG1P19174 1290 aa17.67■□□□□ 0.42
CLSTN3-204ENST00000535313 LIG4P49917 911 aa17.67■□□□□ 0.42
CLSTN3-204ENST00000535313 KARSQ15046 597 aaKnown RBP17.67■□□□□ 0.42
CLSTN3-204ENST00000535313 SLC10A6Q3KNW5 377 aa17.67■□□□□ 0.42
CLSTN3-204ENST00000535313 SEZ6Q53EL9 994 aa17.67■□□□□ 0.42
CLSTN3-204ENST00000535313 VARS2Q5ST30 1063 aaKnown RBP17.67■□□□□ 0.42
CLSTN3-204ENST00000535313 RSPO2Q6UXX9 243 aaPredicted RBP17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms