RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 MKNK1Q9BUB5 465 aa16.9■□□□□ 0.3
MCF2L-232ENST00000535094 WDR11Q9BZH6 1224 aa16.9■□□□□ 0.3
MCF2L-232ENST00000535094 ADAM22Q9P0K1 906 aa16.9■□□□□ 0.3
MCF2L-232ENST00000535094 PCDHB4Q9Y5E5 795 aa16.9■□□□□ 0.3
MCF2L-232ENST00000535094 NCANO14594 1321 aa16.9■□□□□ 0.3
MCF2L-232ENST00000535094 PDIA2Q13087 525 aaKnown RBP16.9■□□□□ 0.3
MCF2L-232ENST00000535094 MPP2Q14168 576 aa16.9■□□□□ 0.3
MCF2L-232ENST00000535094 PALM2Q8IXS6 379 aa16.9■□□□□ 0.3
MCF2L-232ENST00000535094 PDCD7Q8N8D1 485 aaKnown RBP16.9■□□□□ 0.3
MCF2L-232ENST00000535094 TSC22D3Q99576 134 aa16.9■□□□□ 0.3
MCF2L-232ENST00000535094 WDR18Q9BV38 432 aa16.9■□□□□ 0.3
MCF2L-232ENST00000535094 C12orf65Q9H3J6 166 aaKnown RBP16.9■□□□□ 0.3
MCF2L-232ENST00000535094 TMEM206Q9H813 350 aa16.9■□□□□ 0.3
MCF2L-232ENST00000535094 C10orf88Q9H8K7 445 aa16.9■□□□□ 0.3
MCF2L-232ENST00000535094 PCYOX1Q9UHG3 505 aa16.9■□□□□ 0.3
MCF2L-232ENST00000535094 TBX3O15119 743 aa16.9■□□□□ 0.3
MCF2L-232ENST00000535094 EIF3DO15371 548 aaKnown RBP eCLIP16.9■□□□□ 0.33e-6■□□□□ 9
MCF2L-232ENST00000535094 KRT1P04264 644 aa16.9■□□□□ 0.3
MCF2L-232ENST00000535094 ARSEP51690 589 aa16.9■□□□□ 0.3
MCF2L-232ENST00000535094 OTOP1Q7RTM1 612 aa16.9■□□□□ 0.3
MCF2L-232ENST00000535094 SPDYE1Q8NFV5 336 aaPredicted RBP16.9■□□□□ 0.3
MCF2L-232ENST00000535094 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.9■□□□□ 0.3
MCF2L-232ENST00000535094 CFAP57Q96MR6 1250 aa16.9■□□□□ 0.3
MCF2L-232ENST00000535094 POLR3CQ9BUI4 534 aaPredicted RBP16.9■□□□□ 0.3
MCF2L-232ENST00000535094 RAB20Q9NX57 234 aa16.9■□□□□ 0.3
MCF2L-232ENST00000535094 CPSF2Q9P2I0 782 aaKnown RBP16.9■□□□□ 0.3
MCF2L-232ENST00000535094 C21orf2O43822 256 aa16.89■□□□□ 0.3
MCF2L-232ENST00000535094 CTCFP49711 727 aaPredicted RBP16.89■□□□□ 0.3
MCF2L-232ENST00000535094 SNRNP35Q16560 246 aaKnown RBP16.89■□□□□ 0.3
MCF2L-232ENST00000535094 THEMIS2Q5TEJ8 643 aa16.89■□□□□ 0.3
MCF2L-232ENST00000535094 CYFIP1Q7L576 1253 aa16.89■□□□□ 0.3
MCF2L-232ENST00000535094 MAIP1Q8WWC4 291 aa16.89■□□□□ 0.3
MCF2L-232ENST00000535094 CKAP2Q8WWK9 683 aa16.89■□□□□ 0.3
MCF2L-232ENST00000535094 SYNCQ9H7C4 482 aa16.89■□□□□ 0.3
MCF2L-232ENST00000535094 DLGAP2Q9P1A6 1054 aa16.89■□□□□ 0.3
MCF2L-232ENST00000535094 GGPS1O95749 300 aa16.89■□□□□ 0.29
MCF2L-232ENST00000535094 SNHG28P0DPA3 235 aa16.89■□□□□ 0.29
MCF2L-232ENST00000535094 ETS1P14921 441 aa16.89■□□□□ 0.29
MCF2L-232ENST00000535094 SMAD1Q15797 465 aaKnown RBP16.89■□□□□ 0.29
MCF2L-232ENST00000535094 TMEM270Q6UE05 265 aa16.89■□□□□ 0.29
MCF2L-232ENST00000535094 TMEM179Q6ZVK1 233 aa16.89■□□□□ 0.29
MCF2L-232ENST00000535094 USP37Q86T82 979 aa16.89■□□□□ 0.29
MCF2L-232ENST00000535094 ECHDC2Q86YB7 292 aa16.89■□□□□ 0.29
MCF2L-232ENST00000535094 ACER1Q8TDN7 264 aa16.89■□□□□ 0.29
MCF2L-232ENST00000535094 ART4Q93070 314 aa16.89■□□□□ 0.29
MCF2L-232ENST00000535094 NEU2Q9Y3R4 380 aa16.89■□□□□ 0.29
MCF2L-232ENST00000535094 DENND3A2RUS2 1198 aa16.89■□□□□ 0.29
MCF2L-232ENST00000535094 BANF1O75531 89 aa16.89■□□□□ 0.29
MCF2L-232ENST00000535094 ATP13A4Q4VNC1 1196 aa16.89■□□□□ 0.29
MCF2L-232ENST00000535094 KRT39Q6A163 491 aa16.89■□□□□ 0.29
MCF2L-232ENST00000535094 CCDC62Q6P9F0 684 aa16.89■□□□□ 0.29
MCF2L-232ENST00000535094 RPS6KC1Q96S38 1066 aa16.89■□□□□ 0.29
MCF2L-232ENST00000535094 BATF3Q9NR55 127 aa16.89■□□□□ 0.29
MCF2L-232ENST00000535094 GINM1Q9NU53 330 aa16.89■□□□□ 0.29
MCF2L-232ENST00000535094 ANKFY1Q9P2R3 1169 aa16.89■□□□□ 0.29
MCF2L-232ENST00000535094 CCPG1Q9ULG6 757 aa16.89■□□□□ 0.29
MCF2L-232ENST00000535094 PIK3CAP42336 1068 aa16.88■□□□□ 0.29
MCF2L-232ENST00000535094 IRX4P78413 519 aa16.88■□□□□ 0.29
MCF2L-232ENST00000535094 SPIRE1Q08AE8 756 aa16.88■□□□□ 0.29
MCF2L-232ENST00000535094 PKN2Q16513 984 aaKnown RBP16.88■□□□□ 0.29
MCF2L-232ENST00000535094 PPP1R14CQ8TAE6 165 aa16.88■□□□□ 0.29
MCF2L-232ENST00000535094 ZNF570Q96NI8 536 aa16.88■□□□□ 0.29
MCF2L-232ENST00000535094 OSBPL8Q9BZF1 889 aa16.88■□□□□ 0.29
MCF2L-232ENST00000535094 KIAA1683Q9H0B3 1180 aa16.88■□□□□ 0.29
MCF2L-232ENST00000535094 LRRC4BQ9NT99 713 aa16.88■□□□□ 0.29
MCF2L-232ENST00000535094 SEL1LQ9UBV2 794 aa16.88■□□□□ 0.29
MCF2L-232ENST00000535094 COL4A1P02462 1669 aa16.88■□□□□ 0.29
MCF2L-232ENST00000535094 DRG2P55039 364 aaKnown RBP16.88■□□□□ 0.29
MCF2L-232ENST00000535094 CDR2Q01850 454 aa16.88■□□□□ 0.29
MCF2L-232ENST00000535094 C11orf63Q6NUN7 778 aa16.88■□□□□ 0.29
MCF2L-232ENST00000535094 TMEM154Q6P9G4 183 aa16.88■□□□□ 0.29
MCF2L-232ENST00000535094 LVRNQ6Q4G3 990 aa16.88■□□□□ 0.29
MCF2L-232ENST00000535094 VSTM1Q6UX27 236 aa16.88■□□□□ 0.29
MCF2L-232ENST00000535094 CFAP61Q8NHU2 1237 aa16.88■□□□□ 0.29
MCF2L-232ENST00000535094 TTC8Q8TAM2 541 aa16.88■□□□□ 0.29
MCF2L-232ENST00000535094 MAML1Q92585 1016 aa16.88■□□□□ 0.29
MCF2L-232ENST00000535094 COA1Q9GZY4 146 aa16.88■□□□□ 0.29
MCF2L-232ENST00000535094 KMT5AQ9NQR1 393 aa16.88■□□□□ 0.29
MCF2L-232ENST00000535094 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.88■□□□□ 0.293e-6■■■■□ 20.4
MCF2L-232ENST00000535094 GYG2O15488 501 aa16.88■□□□□ 0.29
MCF2L-232ENST00000535094 KITP10721 976 aa16.88■□□□□ 0.29
MCF2L-232ENST00000535094 GABPAQ06546 454 aa16.88■□□□□ 0.29
MCF2L-232ENST00000535094 MTDHQ86UE4 582 aaKnown RBP16.88■□□□□ 0.29
MCF2L-232ENST00000535094 TUFT1Q9NNX1 390 aa16.88■□□□□ 0.29
MCF2L-232ENST00000535094 GTF3C4Q9UKN8 822 aa16.88■□□□□ 0.29
MCF2L-232ENST00000535094 PCDHA3Q9Y5H8 950 aa16.88■□□□□ 0.29
MCF2L-232ENST00000535094 USH1CQ9Y6N9 552 aa16.88■□□□□ 0.29
MCF2L-232ENST00000535094 TLR3O15455 904 aaKnown RBP16.87■□□□□ 0.29
MCF2L-232ENST00000535094 PSMC4P43686 418 aa16.87■□□□□ 0.29
MCF2L-232ENST00000535094 TAF1BQ53T94 588 aaPredicted RBP16.87■□□□□ 0.29
MCF2L-232ENST00000535094 FBXL13Q8NEE6 735 aa16.87■□□□□ 0.29
MCF2L-232ENST00000535094 LGR5O75473 907 aa16.87■□□□□ 0.29
MCF2L-232ENST00000535094 CD19P15391 556 aa16.87■□□□□ 0.29
MCF2L-232ENST00000535094 BNIP1Q12981 228 aa16.87■□□□□ 0.29
MCF2L-232ENST00000535094 DMP1Q13316 513 aaPredicted RBP16.87■□□□□ 0.29
MCF2L-232ENST00000535094 BRDTQ58F21 947 aaPredicted RBP16.87■□□□□ 0.29
MCF2L-232ENST00000535094 SPOPLQ6IQ16 392 aa16.87■□□□□ 0.29
MCF2L-232ENST00000535094 FOXR2Q6PJQ5 311 aa16.87■□□□□ 0.29
MCF2L-232ENST00000535094 RILPQ96NA2 401 aa16.87■□□□□ 0.29
MCF2L-232ENST00000535094 ZWILCHQ9H900 591 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms