RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 IL23AQ9NPF7 189 aa13.32□□□□□ -0.28
SCARB1-204ENST00000535005 MAGEC2Q9UBF1 373 aaPredicted RBP13.32□□□□□ -0.28
SCARB1-204ENST00000535005 ARMCX3Q9UH62 379 aaPredicted RBP13.32□□□□□ -0.28
SCARB1-204ENST00000535005 LIMA1Q9UHB6 759 aaKnown RBP13.32□□□□□ -0.28
SCARB1-204ENST00000535005 IPPQ9Y573 584 aa13.32□□□□□ -0.28
SCARB1-204ENST00000535005 TET1Q8NFU7 2136 aa13.31□□□□□ -0.28
SCARB1-204ENST00000535005 SCN5AQ14524 2016 aa13.31□□□□□ -0.28
SCARB1-204ENST00000535005 KCNJ18B7U540 433 aa13.31□□□□□ -0.28
SCARB1-204ENST00000535005 EOMESO95936 686 aa13.31□□□□□ -0.28
SCARB1-204ENST00000535005 TNFSF9P41273 254 aa13.31□□□□□ -0.28
SCARB1-204ENST00000535005 CYP24A1Q07973 514 aa13.31□□□□□ -0.28
SCARB1-204ENST00000535005 IKBKEQ14164 716 aa13.31□□□□□ -0.28
SCARB1-204ENST00000535005 KCNJ12Q14500 433 aa13.31□□□□□ -0.28
SCARB1-204ENST00000535005 PSMD6Q15008 389 aa13.31□□□□□ -0.28
SCARB1-204ENST00000535005 BRD3Q15059 726 aa13.31□□□□□ -0.28
SCARB1-204ENST00000535005 SURF1Q15526 300 aa13.31□□□□□ -0.28
SCARB1-204ENST00000535005 ENOX2Q16206 610 aaKnown RBP13.31□□□□□ -0.28
SCARB1-204ENST00000535005 CCDC40Q4G0X9 1142 aa13.31□□□□□ -0.28
SCARB1-204ENST00000535005 SEZ6Q53EL9 994 aa13.31□□□□□ -0.28
SCARB1-204ENST00000535005 ZNF598Q86UK7 904 aaKnown RBP13.31□□□□□ -0.28
SCARB1-204ENST00000535005 ECHDC2Q86YB7 292 aa13.31□□□□□ -0.28
SCARB1-204ENST00000535005 RDH13Q8NBN7 331 aa13.31□□□□□ -0.28
SCARB1-204ENST00000535005 BADQ92934 168 aa13.31□□□□□ -0.28
SCARB1-204ENST00000535005 NXF3Q9H4D5 531 aaKnown RBP13.31□□□□□ -0.28
SCARB1-204ENST00000535005 ELAC1Q9H777 363 aaKnown RBP13.31□□□□□ -0.28
SCARB1-204ENST00000535005 RPF1Q9H9Y2 349 aaKnown RBP13.31□□□□□ -0.28
SCARB1-204ENST00000535005 PLEKHA5Q9HAU0 1116 aa13.31□□□□□ -0.28
SCARB1-204ENST00000535005 ARFGAP3Q9NP61 516 aa13.31□□□□□ -0.28
SCARB1-204ENST00000535005 RBAKQ9NYW8 714 aaPredicted RBP13.31□□□□□ -0.28
SCARB1-204ENST00000535005 ABHD14A-ACY1A0A1B0GW23 586 aa13.3□□□□□ -0.28
SCARB1-204ENST00000535005 RBAK-RBAKDNI3L0D1 243 aa13.3□□□□□ -0.28
SCARB1-204ENST00000535005 EFCAB14O75071 495 aa13.3□□□□□ -0.28
SCARB1-204ENST00000535005 IL18RAPO95256 599 aa13.3□□□□□ -0.28
SCARB1-204ENST00000535005 ATP1A3P13637 1013 aa13.3□□□□□ -0.28
SCARB1-204ENST00000535005 KRT13P13646 458 aa13.3□□□□□ -0.28
SCARB1-204ENST00000535005 CLDN10P78369 228 aa13.3□□□□□ -0.28
SCARB1-204ENST00000535005 FPGSQ05932 587 aa13.3□□□□□ -0.28
SCARB1-204ENST00000535005 PPP2R3AQ06190 1150 aa13.3□□□□□ -0.28
SCARB1-204ENST00000535005 SLC10A6Q3KNW5 377 aa13.3□□□□□ -0.28
SCARB1-204ENST00000535005 XKR4Q5GH76 650 aa13.3□□□□□ -0.28
SCARB1-204ENST00000535005 CC2D1AQ6P1N0 951 aaPredicted RBP13.3□□□□□ -0.28
SCARB1-204ENST00000535005 APTXQ7Z2E3 356 aaKnown RBP13.3□□□□□ -0.28
SCARB1-204ENST00000535005 CD302Q8IX05 232 aa13.3□□□□□ -0.28
SCARB1-204ENST00000535005 TMEM192Q8IY95 271 aa13.3□□□□□ -0.28
SCARB1-204ENST00000535005 PARD3BQ8TEW8 1205 aa13.3□□□□□ -0.28
SCARB1-204ENST00000535005 PGBD4Q96DM1 585 aa13.3□□□□□ -0.28
SCARB1-204ENST00000535005 TSPAN18Q96SJ8 248 aa13.3□□□□□ -0.28
SCARB1-204ENST00000535005 RNF39Q9H2S5 420 aa13.3□□□□□ -0.28
SCARB1-204ENST00000535005 ASB7Q9H672 318 aa13.3□□□□□ -0.28
SCARB1-204ENST00000535005 RNF216Q9NWF9 866 aaPredicted RBP13.3□□□□□ -0.28
SCARB1-204ENST00000535005 SNTG2Q9NY99 539 aa13.3□□□□□ -0.28
SCARB1-204ENST00000535005 NR2E3Q9Y5X4 410 aa13.3□□□□□ -0.28
SCARB1-204ENST00000535005 TTC26A0AVF1 554 aa13.29□□□□□ -0.28
SCARB1-204ENST00000535005 MEFVO15553 781 aaPredicted RBP13.29□□□□□ -0.28
SCARB1-204ENST00000535005 TUBBP07437 444 aa13.29□□□□□ -0.28
SCARB1-204ENST00000535005 ITGA4P13612 1032 aa13.29□□□□□ -0.28
SCARB1-204ENST00000535005 ATF7P17544 494 aaPredicted RBP13.29□□□□□ -0.28
SCARB1-204ENST00000535005 VAMP7P51809 220 aa13.29□□□□□ -0.28
SCARB1-204ENST00000535005 OSTNP61366 133 aa13.29□□□□□ -0.28
SCARB1-204ENST00000535005 BFSP1Q12934 665 aa13.29□□□□□ -0.28
SCARB1-204ENST00000535005 KRT31Q15323 416 aa13.29□□□□□ -0.28
SCARB1-204ENST00000535005 HSP90AA4PQ58FG1 418 aa13.29□□□□□ -0.28
SCARB1-204ENST00000535005 ALKAL1Q6UXT8 129 aa13.29□□□□□ -0.28
SCARB1-204ENST00000535005 C16orf59Q7L2K0 433 aa13.29□□□□□ -0.28
SCARB1-204ENST00000535005 USP37Q86T82 979 aa13.29□□□□□ -0.28
SCARB1-204ENST00000535005 VSTM4Q8IW00 320 aa13.29□□□□□ -0.28
SCARB1-204ENST00000535005 CRIPAKQ8N1N5 446 aa13.29□□□□□ -0.28
SCARB1-204ENST00000535005 ANKRD20A12PQ8NF67 263 aa13.29□□□□□ -0.28
SCARB1-204ENST00000535005 PLEKHO2Q8TD55 490 aa13.29□□□□□ -0.28
SCARB1-204ENST00000535005 UBN1Q9NPG3 1134 aa13.29□□□□□ -0.28
SCARB1-204ENST00000535005 ST7Q9NRC1 585 aa13.29□□□□□ -0.28
SCARB1-204ENST00000535005 TOPORSQ9NS56 1045 aaPredicted RBP13.29□□□□□ -0.28
SCARB1-204ENST00000535005 FEZ2Q9UHY8 353 aaPredicted RBP13.29□□□□□ -0.28
SCARB1-204ENST00000535005 GIT1Q9Y2X7 761 aa13.29□□□□□ -0.28
SCARB1-204ENST00000535005 HES2Q9Y543 173 aa13.29□□□□□ -0.28
SCARB1-204ENST00000535005 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.29□□□□□ -0.28
SCARB1-204ENST00000535005 CCDC151A5D8V7 595 aa13.29□□□□□ -0.28
SCARB1-204ENST00000535005 RECQL4O94761 1208 aa13.29□□□□□ -0.28
SCARB1-204ENST00000535005 BAIAP3O94812 1187 aa13.29□□□□□ -0.28
SCARB1-204ENST00000535005 CXCL8P10145 99 aa13.29□□□□□ -0.28
SCARB1-204ENST00000535005 ACTN1P12814 892 aa13.29□□□□□ -0.28
SCARB1-204ENST00000535005 MTIF2P46199 727 aaKnown RBP13.29□□□□□ -0.28
SCARB1-204ENST00000535005 YARSP54577 528 aaKnown RBP13.29□□□□□ -0.28
SCARB1-204ENST00000535005 MAN2A1Q16706 1144 aa13.29□□□□□ -0.28
SCARB1-204ENST00000535005 C1orf220Q5T0J3 134 aa13.29□□□□□ -0.28
SCARB1-204ENST00000535005 AGMOQ6ZNB7 445 aa13.29□□□□□ -0.28
SCARB1-204ENST00000535005 RSRC2Q7L4I2 434 aaKnown RBP13.29□□□□□ -0.28
SCARB1-204ENST00000535005 REXO1L1PQ8IX06 675 aa13.29□□□□□ -0.28
SCARB1-204ENST00000535005 HNRNPLLQ8WVV9 542 aaKnown RBP13.29□□□□□ -0.28
SCARB1-204ENST00000535005 SLC35C1Q96A29 364 aa13.29□□□□□ -0.28
SCARB1-204ENST00000535005 SNX27Q96L92 541 aa13.29□□□□□ -0.28
SCARB1-204ENST00000535005 TUBGCP2Q9BSJ2 902 aa13.29□□□□□ -0.28
SCARB1-204ENST00000535005 TMEM161AQ9NX61 479 aa13.29□□□□□ -0.28
SCARB1-204ENST00000535005 ZMYND8Q9ULU4 1186 aaPredicted RBP13.29□□□□□ -0.28
SCARB1-204ENST00000535005 LACTBL1A8MY62 500 aa13.28□□□□□ -0.28
SCARB1-204ENST00000535005 INPPL1O15357 1258 aa13.28□□□□□ -0.28
SCARB1-204ENST00000535005 STX10O60499 249 aa13.28□□□□□ -0.28
SCARB1-204ENST00000535005 URI1O94763 535 aaPredicted RBP13.28□□□□□ -0.28
SCARB1-204ENST00000535005 IVLP07476 585 aa13.28□□□□□ -0.28
SCARB1-204ENST00000535005 CASQ1P31415 396 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms