RNA–Protein interactions for RNA: ENST00000534885.5

TNFRSF1A-205, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best)

Gene TNFRSF1A, Length 2,069 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-205ENST00000534885 SLC10A6Q3KNW5 377 aa21.94■■□□□ 1.1
TNFRSF1A-205ENST00000534885 DCAF4L1Q3SXM0 396 aa21.94■■□□□ 1.1
TNFRSF1A-205ENST00000534885 RPAINQ86UA6 219 aa21.94■■□□□ 1.1
TNFRSF1A-205ENST00000534885 ARRDC4Q8NCT1 418 aa21.94■■□□□ 1.1
TNFRSF1A-205ENST00000534885 SENP6Q9GZR1 1112 aaPredicted RBP21.94■■□□□ 1.1
TNFRSF1A-205ENST00000534885 FOXN3O00409 490 aaPredicted RBP21.93■■□□□ 1.1
TNFRSF1A-205ENST00000534885 ZNF263O14978 683 aa21.93■■□□□ 1.1
TNFRSF1A-205ENST00000534885 CCP110O43303 1012 aa21.93■■□□□ 1.1
TNFRSF1A-205ENST00000534885 EVI5O60447 810 aa21.93■■□□□ 1.1
TNFRSF1A-205ENST00000534885 IL18RAPO95256 599 aa21.93■■□□□ 1.1
TNFRSF1A-205ENST00000534885 AXLP30530 894 aa21.93■■□□□ 1.1
TNFRSF1A-205ENST00000534885 THPOP40225 353 aa21.93■■□□□ 1.1
TNFRSF1A-205ENST00000534885 KIF11P52732 1056 aa21.93■■□□□ 1.1
TNFRSF1A-205ENST00000534885 MAPK8IP2Q13387 824 aaPredicted RBP21.93■■□□□ 1.1
TNFRSF1A-205ENST00000534885 DUOXA2Q1HG44 320 aa21.93■■□□□ 1.1
TNFRSF1A-205ENST00000534885 ASTE1Q2TB18 679 aaPredicted RBP21.93■■□□□ 1.1
TNFRSF1A-205ENST00000534885 TRAPPC11Q7Z392 1133 aa21.93■■□□□ 1.1
TNFRSF1A-205ENST00000534885 DHX38Q92620 1227 aaKnown RBP21.93■■□□□ 1.1
TNFRSF1A-205ENST00000534885 DEF6Q9H4E7 631 aa21.93■■□□□ 1.1
TNFRSF1A-205ENST00000534885 HAUS4Q9H6D7 363 aa21.93■■□□□ 1.1
TNFRSF1A-205ENST00000534885 SSU72P8A0A1W2PR75 194 aa21.92■■□□□ 1.1
TNFRSF1A-205ENST00000534885 EIF3CLB5ME19 914 aaKnown RBP21.92■■□□□ 1.1
TNFRSF1A-205ENST00000534885 PHACTR2O75167 634 aa21.92■■□□□ 1.1
TNFRSF1A-205ENST00000534885 NFICP08651 508 aa21.92■■□□□ 1.1
TNFRSF1A-205ENST00000534885 GRM5P41594 1212 aa21.92■■□□□ 1.1
TNFRSF1A-205ENST00000534885 AP3M2P53677 418 aa21.92■■□□□ 1.1
TNFRSF1A-205ENST00000534885 CYP27A1Q02318 531 aa21.92■■□□□ 1.1
TNFRSF1A-205ENST00000534885 PTK2Q05397 1052 aa21.92■■□□□ 1.1
TNFRSF1A-205ENST00000534885 MGAT3Q09327 533 aa21.92■■□□□ 1.1
TNFRSF1A-205ENST00000534885 KYAT1Q16773 422 aa21.92■■□□□ 1.1
TNFRSF1A-205ENST00000534885 SPOPLQ6IQ16 392 aa21.92■■□□□ 1.1
TNFRSF1A-205ENST00000534885 NYAP1Q6ZVC0 841 aa21.92■■□□□ 1.1
TNFRSF1A-205ENST00000534885 DNAJC5GQ8N7S2 189 aa21.92■■□□□ 1.1
TNFRSF1A-205ENST00000534885 ACAP3Q96P50 834 aa21.92■■□□□ 1.1
TNFRSF1A-205ENST00000534885 EIF3CQ99613 913 aaKnown RBP21.92■■□□□ 1.1
TNFRSF1A-205ENST00000534885 PAK6Q9NQU5 681 aaPredicted RBP21.92■■□□□ 1.1
TNFRSF1A-205ENST00000534885 STARD7Q9NQZ5 370 aa21.92■■□□□ 1.1
TNFRSF1A-205ENST00000534885 NOD1Q9Y239 953 aa21.92■■□□□ 1.1
TNFRSF1A-205ENST00000534885 HES2Q9Y543 173 aa21.92■■□□□ 1.1
TNFRSF1A-205ENST00000534885 MROH7Q68CQ1 1323 aa21.92■■□□□ 1.1
TNFRSF1A-205ENST00000534885 CST3P01034 146 aaPredicted RBP21.92■■□□□ 1.1
TNFRSF1A-205ENST00000534885 TMEM191BP0C7N4 346 aa21.92■■□□□ 1.1
TNFRSF1A-205ENST00000534885 NCOA4Q13772 614 aa21.92■■□□□ 1.1
TNFRSF1A-205ENST00000534885 JADE1Q6IE81 842 aa21.92■■□□□ 1.1
TNFRSF1A-205ENST00000534885 TMEM130Q8N3G9 435 aa21.92■■□□□ 1.1
TNFRSF1A-205ENST00000534885 DEFB118Q96PH6 123 aa21.92■■□□□ 1.1
TNFRSF1A-205ENST00000534885 OSBPL7Q9BZF2 842 aa21.92■■□□□ 1.1
TNFRSF1A-205ENST00000534885 KBTBD13C9JR72 458 aa21.91■■□□□ 1.1
TNFRSF1A-205ENST00000534885 AKR1B10O60218 316 aa21.91■■□□□ 1.1
TNFRSF1A-205ENST00000534885 ZC3H11AO75152 810 aaKnown RBP eCLIP21.91■■□□□ 1.1
TNFRSF1A-205ENST00000534885 PRKCIP41743 596 aa21.91■■□□□ 1.1
TNFRSF1A-205ENST00000534885 PTPN11Q06124 597 aaPredicted RBP21.91■■□□□ 1.1
TNFRSF1A-205ENST00000534885 NXF3Q9H4D5 531 aaKnown RBP21.91■■□□□ 1.1
TNFRSF1A-205ENST00000534885 SNTG2Q9NY99 539 aa21.91■■□□□ 1.1
TNFRSF1A-205ENST00000534885 FERP16591 822 aa21.91■■□□□ 1.1
TNFRSF1A-205ENST00000534885 POU5F1Q01860 360 aaKnown RBP21.91■■□□□ 1.1
TNFRSF1A-205ENST00000534885 GFPT1Q06210 699 aaPredicted RBP21.91■■□□□ 1.1
TNFRSF1A-205ENST00000534885 PTK7Q13308 1070 aa21.91■■□□□ 1.1
TNFRSF1A-205ENST00000534885 ZNF571Q7Z3V5 609 aaPredicted RBP21.91■■□□□ 1.1
TNFRSF1A-205ENST00000534885 ARID3AQ99856 593 aa21.91■■□□□ 1.1
TNFRSF1A-205ENST00000534885 TRIM6Q9C030 488 aaPredicted RBP21.91■■□□□ 1.1
TNFRSF1A-205ENST00000534885 TRPV6Q9H1D0 765 aa21.91■■□□□ 1.1
TNFRSF1A-205ENST00000534885 CXCL16Q9H2A7 254 aa21.91■■□□□ 1.1
TNFRSF1A-205ENST00000534885 APOBEC3GQ9HC16 384 aaKnown RBP21.91■■□□□ 1.1
TNFRSF1A-205ENST00000534885 LZTFL1Q9NQ48 299 aa21.91■■□□□ 1.1
TNFRSF1A-205ENST00000534885 C1orf112Q9NSG2 853 aa21.91■■□□□ 1.1
TNFRSF1A-205ENST00000534885 TFR2Q9UP52 801 aa21.91■■□□□ 1.1
TNFRSF1A-205ENST00000534885 PHF24Q9UPV7 400 aa21.91■■□□□ 1.1
TNFRSF1A-205ENST00000534885 RPS6KA5O75582 802 aa21.9■■□□□ 1.1
TNFRSF1A-205ENST00000534885 MFAP3P55082 362 aa21.9■■□□□ 1.1
TNFRSF1A-205ENST00000534885 PTPN14Q15678 1187 aa21.9■■□□□ 1.1
TNFRSF1A-205ENST00000534885 WDR44Q5JSH3 913 aa21.9■■□□□ 1.1
TNFRSF1A-205ENST00000534885 UBXN11Q5T124 520 aa21.9■■□□□ 1.1
TNFRSF1A-205ENST00000534885 APBB1IPQ7Z5R6 666 aaPredicted RBP21.9■■□□□ 1.1
TNFRSF1A-205ENST00000534885 SLC43A3Q8NBI5 491 aa21.9■■□□□ 1.1
TNFRSF1A-205ENST00000534885 ANKRD36BP1Q96IX9 119 aa21.9■■□□□ 1.1
TNFRSF1A-205ENST00000534885 CCDC94Q9BW85 323 aaPredicted RBP21.9■■□□□ 1.1
TNFRSF1A-205ENST00000534885 ASB7Q9H672 318 aa21.9■■□□□ 1.1
TNFRSF1A-205ENST00000534885 RALGAPA2Q2PPJ7 1873 aa21.89■■□□□ 1.1
TNFRSF1A-205ENST00000534885 ABL1P00519 1130 aa21.89■■□□□ 1.1
TNFRSF1A-205ENST00000534885 RPLP2P05387 115 aaKnown RBP21.89■■□□□ 1.1
TNFRSF1A-205ENST00000534885 CCL5P13501 91 aa21.89■■□□□ 1.1
TNFRSF1A-205ENST00000534885 TRIM71Q2Q1W2 868 aaKnown RBP21.89■■□□□ 1.1
TNFRSF1A-205ENST00000534885 DNTTIP2Q5QJE6 756 aaKnown RBP21.89■■□□□ 1.1
TNFRSF1A-205ENST00000534885 RNF208Q9H0X6 261 aa21.89■■□□□ 1.1
TNFRSF1A-205ENST00000534885 ST3GAL5Q9UNP4 418 aa21.89■■□□□ 1.1
TNFRSF1A-205ENST00000534885 BZW2Q9Y6E2 419 aaKnown RBP21.89■■□□□ 1.1
TNFRSF1A-205ENST00000534885 A0A0U1RQG5 324 aaPredicted RBP21.89■■□□□ 1.09
TNFRSF1A-205ENST00000534885 IPO7O95373 1038 aaKnown RBP21.89■■□□□ 1.09
TNFRSF1A-205ENST00000534885 LCA5LO95447 670 aa21.89■■□□□ 1.09
TNFRSF1A-205ENST00000534885 TNNC2P02585 160 aa21.89■■□□□ 1.09
TNFRSF1A-205ENST00000534885 TNNT1P13805 278 aa21.89■■□□□ 1.09
TNFRSF1A-205ENST00000534885 NOP14P78316 857 aaKnown RBP21.89■■□□□ 1.09
TNFRSF1A-205ENST00000534885 GCNT1Q02742 428 aa21.89■■□□□ 1.09
TNFRSF1A-205ENST00000534885 NFX1Q12986 1120 aaKnown RBP21.89■■□□□ 1.09
TNFRSF1A-205ENST00000534885 SHC3Q92529 594 aa21.89■■□□□ 1.09
TNFRSF1A-205ENST00000534885 ADAMTS1Q9UHI8 967 aa21.89■■□□□ 1.09
TNFRSF1A-205ENST00000534885 NUB1Q9Y5A7 615 aa21.89■■□□□ 1.09
TNFRSF1A-205ENST00000534885 UMODL1Q5DID0 1318 aa21.88■■□□□ 1.09
TNFRSF1A-205ENST00000534885 A0A087X0T9 212 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms