RNA–Protein interactions for RNA: ENST00000534189.1

CCDC180-213, Transcript of coiled-coil domain containing 180, humanhuman

TSL 3

Gene CCDC180, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC180-213ENST00000534189 NR2E1Q9Y466 385 aa17.81■□□□□ 0.44
CCDC180-213ENST00000534189 BRD1O95696 1058 aa17.8■□□□□ 0.44
CCDC180-213ENST00000534189 C1RP00736 705 aa17.8■□□□□ 0.44
CCDC180-213ENST00000534189 HSP90AA1P07900 732 aaKnown RBP17.8■□□□□ 0.44
CCDC180-213ENST00000534189 PDIA4P13667 645 aaKnown RBP17.8■□□□□ 0.44
CCDC180-213ENST00000534189 PROZP22891 400 aa17.8■□□□□ 0.44
CCDC180-213ENST00000534189 OSTNP61366 133 aa17.8■□□□□ 0.44
CCDC180-213ENST00000534189 CACNB1Q02641 598 aaPredicted RBP17.8■□□□□ 0.44
CCDC180-213ENST00000534189 NAB2Q15742 525 aa17.8■□□□□ 0.44
CCDC180-213ENST00000534189 HAUS6Q7Z4H7 955 aa17.8■□□□□ 0.44
CCDC180-213ENST00000534189 MYCT1Q8N699 235 aa17.8■□□□□ 0.44
CCDC180-213ENST00000534189 CEP120Q8N960 986 aa17.8■□□□□ 0.44
CCDC180-213ENST00000534189 RIN2Q8WYP3 895 aaPredicted RBP17.8■□□□□ 0.44
CCDC180-213ENST00000534189 LARP4BQ92615 738 aaKnown RBP17.8■□□□□ 0.44
CCDC180-213ENST00000534189 EPSTI1Q96J88 318 aa17.8■□□□□ 0.44
CCDC180-213ENST00000534189 UROC1Q96N76 676 aa17.8■□□□□ 0.44
CCDC180-213ENST00000534189 PPP1R10Q96QC0 940 aaKnown RBP17.8■□□□□ 0.44
CCDC180-213ENST00000534189 PAAF1Q9BRP4 392 aa17.8■□□□□ 0.44
CCDC180-213ENST00000534189 PARVGQ9HBI0 331 aa17.8■□□□□ 0.44
CCDC180-213ENST00000534189 SLC38A7Q9NVC3 462 aa17.8■□□□□ 0.44
CCDC180-213ENST00000534189 FNIP2Q9P278 1114 aa17.8■□□□□ 0.44
CCDC180-213ENST00000534189 CACNG4Q9UBN1 327 aa17.8■□□□□ 0.44
CCDC180-213ENST00000534189 FBXO2Q9UK22 296 aaPredicted RBP17.8■□□□□ 0.44
CCDC180-213ENST00000534189 SORCS3Q9UPU3 1222 aa17.8■□□□□ 0.44
CCDC180-213ENST00000534189 SMIM28A0A1B0GU29 152 aa17.79■□□□□ 0.44
CCDC180-213ENST00000534189 CLDN3O15551 220 aa17.79■□□□□ 0.44
CCDC180-213ENST00000534189 TBCAO75347 108 aaKnown RBP17.79■□□□□ 0.44
CCDC180-213ENST00000534189 KIF4AO95239 1232 aa17.79■□□□□ 0.44
CCDC180-213ENST00000534189 GLUD1P00367 558 aa17.79■□□□□ 0.44
CCDC180-213ENST00000534189 HARSP12081 509 aaKnown RBP17.79■□□□□ 0.44
CCDC180-213ENST00000534189 ABCD1P33897 745 aa17.79■□□□□ 0.44
CCDC180-213ENST00000534189 MATR3P43243 847 aaKnown RBP eCLIP17.79■□□□□ 0.44
CCDC180-213ENST00000534189 CLCN5P51795 746 aa17.79■□□□□ 0.44
CCDC180-213ENST00000534189 NCKAP1LP55160 1127 aa17.79■□□□□ 0.44
CCDC180-213ENST00000534189 PUM1Q14671 1186 aaKnown RBP eCLIP17.79■□□□□ 0.44
CCDC180-213ENST00000534189 GLRA4Q5JXX5 417 aa17.79■□□□□ 0.44
CCDC180-213ENST00000534189 SPECC1Q5M775 1068 aa17.79■□□□□ 0.44
CCDC180-213ENST00000534189 FAM171A1Q5VUB5 890 aa17.79■□□□□ 0.44
CCDC180-213ENST00000534189 PDXDC1Q6P996 788 aa17.79■□□□□ 0.44
CCDC180-213ENST00000534189 DCLRE1AQ6PJP8 1040 aa17.79■□□□□ 0.44
CCDC180-213ENST00000534189 TMC5Q6UXY8 1006 aa17.79■□□□□ 0.44
CCDC180-213ENST00000534189 KRI1Q8N9T8 703 aaKnown RBP17.79■□□□□ 0.44
CCDC180-213ENST00000534189 KCNN1Q92952 543 aa17.79■□□□□ 0.44
CCDC180-213ENST00000534189 BICD1Q96G01 975 aa17.79■□□□□ 0.44
CCDC180-213ENST00000534189 ZBTB45Q96K62 511 aaPredicted RBP17.79■□□□□ 0.44
CCDC180-213ENST00000534189 B3GALT6Q96L58 329 aa17.79■□□□□ 0.44
CCDC180-213ENST00000534189 USP28Q96RU2 1077 aa17.79■□□□□ 0.44
CCDC180-213ENST00000534189 TTPALQ9BTX7 342 aa17.79■□□□□ 0.44
CCDC180-213ENST00000534189 CXCL16Q9H2A7 254 aa17.79■□□□□ 0.44
CCDC180-213ENST00000534189 ZHX3Q9H4I2 956 aa17.79■□□□□ 0.44
CCDC180-213ENST00000534189 ANKFY1Q9P2R3 1169 aa17.79■□□□□ 0.44
CCDC180-213ENST00000534189 STK17AQ9UEE5 414 aa17.79■□□□□ 0.44
CCDC180-213ENST00000534189 MORC2Q9Y6X9 1032 aaPredicted RBP17.79■□□□□ 0.44
CCDC180-213ENST00000534189 CACNA1GO43497 2377 aa17.78■□□□□ 0.44
CCDC180-213ENST00000534189 ABLIM1O14639 778 aa17.78■□□□□ 0.44
CCDC180-213ENST00000534189 TRAK2O60296 914 aa17.78■□□□□ 0.44
CCDC180-213ENST00000534189 ZNF131P52739 623 aa17.78■□□□□ 0.44
CCDC180-213ENST00000534189 MTMR3Q13615 1198 aa17.78■□□□□ 0.44
CCDC180-213ENST00000534189 NOLC1Q14978 699 aaKnown RBP eCLIP17.78■□□□□ 0.44
CCDC180-213ENST00000534189 SLC39A14Q15043 492 aa17.78■□□□□ 0.44
CCDC180-213ENST00000534189 XKR4Q5GH76 650 aa17.78■□□□□ 0.44
CCDC180-213ENST00000534189 RRAGBQ5VZM2 374 aa17.78■□□□□ 0.44
CCDC180-213ENST00000534189 GPR149Q86SP6 731 aa17.78■□□□□ 0.44
CCDC180-213ENST00000534189 LRRC15Q8TF66 581 aa17.78■□□□□ 0.44
CCDC180-213ENST00000534189 HASPINQ8TF76 798 aa17.78■□□□□ 0.44
CCDC180-213ENST00000534189 HDAC7Q8WUI4 952 aa17.78■□□□□ 0.44
CCDC180-213ENST00000534189 DDX27Q96GQ7 796 aaKnown RBP17.78■□□□□ 0.44
CCDC180-213ENST00000534189 ZNF396Q96N95 335 aaPredicted RBP17.78■□□□□ 0.44
CCDC180-213ENST00000534189 CLIC6Q96NY7 704 aa17.78■□□□□ 0.44
CCDC180-213ENST00000534189 POMKQ9H5K3 350 aa17.78■□□□□ 0.44
CCDC180-213ENST00000534189 MAN1C1Q9NR34 630 aa17.78■□□□□ 0.44
CCDC180-213ENST00000534189 TSHZ2Q9NRE2 1034 aa17.78■□□□□ 0.44
CCDC180-213ENST00000534189 MYH11P35749 1972 aa17.78■□□□□ 0.44
CCDC180-213ENST00000534189 TMEM189-UBE2V1I3L0A0 370 aa17.77■□□□□ 0.44
CCDC180-213ENST00000534189 K7ENM7 598 aa17.77■□□□□ 0.44
CCDC180-213ENST00000534189 TRAPPC3O43617 180 aa17.77■□□□□ 0.44
CCDC180-213ENST00000534189 B3GAT3O94766 335 aa17.77■□□□□ 0.44
CCDC180-213ENST00000534189 WEE2P0C1S8 567 aa17.77■□□□□ 0.44
CCDC180-213ENST00000534189 KCNE1P15382 129 aa17.77■□□□□ 0.44
CCDC180-213ENST00000534189 CLCNKBP51801 687 aa17.77■□□□□ 0.44
CCDC180-213ENST00000534189 STK38Q15208 465 aa17.77■□□□□ 0.44
CCDC180-213ENST00000534189 KANK3Q6NY19 840 aa17.77■□□□□ 0.44
CCDC180-213ENST00000534189 ALKAL1Q6UXT8 129 aa17.77■□□□□ 0.44
CCDC180-213ENST00000534189 CYP26C1Q6V0L0 522 aa17.77■□□□□ 0.44
CCDC180-213ENST00000534189 C15orf39Q6ZRI6 1047 aa17.77■□□□□ 0.44
CCDC180-213ENST00000534189 CCDC73Q6ZRK6 1079 aa17.77■□□□□ 0.44
CCDC180-213ENST00000534189 USP49Q70CQ1 688 aa17.77■□□□□ 0.44
CCDC180-213ENST00000534189 CEP57Q86XR8 500 aa17.77■□□□□ 0.44
CCDC180-213ENST00000534189 PALB2Q86YC2 1186 aa17.77■□□□□ 0.44
CCDC180-213ENST00000534189 CMASQ8NFW8 434 aaPredicted RBP17.77■□□□□ 0.44
CCDC180-213ENST00000534189 PLEKHA4Q9H4M7 779 aa17.77■□□□□ 0.44
CCDC180-213ENST00000534189 DLL3Q9NYJ7 618 aa17.77■□□□□ 0.44
CCDC180-213ENST00000534189 CDH22Q9UJ99 828 aa17.77■□□□□ 0.44
CCDC180-213ENST00000534189 LIG4P49917 911 aa17.76■□□□□ 0.43
CCDC180-213ENST00000534189 MCL1Q07820 350 aa17.76■□□□□ 0.43
CCDC180-213ENST00000534189 KYAT1Q16773 422 aa17.76■□□□□ 0.43
CCDC180-213ENST00000534189 UPP1Q16831 310 aa17.76■□□□□ 0.43
CCDC180-213ENST00000534189 RTP2Q5QGT7 225 aa17.76■□□□□ 0.43
CCDC180-213ENST00000534189 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.76■□□□□ 0.43
CCDC180-213ENST00000534189 SV2BQ7L1I2 683 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms