RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 SNX21Q969T3 373 aa10.55□□□□□ -0.72
SSBP3-215ENST00000533946 ASIC4Q96FT7 647 aa10.55□□□□□ -0.72
SSBP3-215ENST00000533946 DDX27Q96GQ7 796 aaKnown RBP10.55□□□□□ -0.72
SSBP3-215ENST00000533946 INTS4Q96HW7 963 aaKnown RBP10.55□□□□□ -0.72
SSBP3-215ENST00000533946 DRC1Q96MC2 740 aa10.55□□□□□ -0.72
SSBP3-215ENST00000533946 PHOX2BQ99453 314 aa10.55□□□□□ -0.72
SSBP3-215ENST00000533946 TCHPQ9BT92 498 aa10.55□□□□□ -0.72
SSBP3-215ENST00000533946 RPP25Q9BUL9 199 aaKnown RBP10.55□□□□□ -0.72
SSBP3-215ENST00000533946 CCSER1Q9C0I3 900 aa10.55□□□□□ -0.72
SSBP3-215ENST00000533946 HCFC1R1Q9NWW0 138 aa10.55□□□□□ -0.72
SSBP3-215ENST00000533946 DAXXQ9UER7 740 aaPredicted RBP10.55□□□□□ -0.72
SSBP3-215ENST00000533946 TBX20Q9UMR3 447 aa10.55□□□□□ -0.72
SSBP3-215ENST00000533946 TIMM13Q9Y5L4 95 aaPredicted RBP10.55□□□□□ -0.72
SSBP3-215ENST00000533946 CCL16O15467 120 aa10.54□□□□□ -0.72
SSBP3-215ENST00000533946 NARSO43776 548 aaKnown RBP10.54□□□□□ -0.72
SSBP3-215ENST00000533946 B3GAT3O94766 335 aa10.54□□□□□ -0.72
SSBP3-215ENST00000533946 VNN2O95498 520 aa10.54□□□□□ -0.72
SSBP3-215ENST00000533946 MCF2P10911 925 aa10.54□□□□□ -0.72
SSBP3-215ENST00000533946 FGFR3P22607 806 aa10.54□□□□□ -0.72
SSBP3-215ENST00000533946 ADSSP30520 456 aa10.54□□□□□ -0.72
SSBP3-215ENST00000533946 DDIT3P35638 169 aa10.54□□□□□ -0.72
SSBP3-215ENST00000533946 MCL1Q07820 350 aa10.54□□□□□ -0.72
SSBP3-215ENST00000533946 PSMD5Q16401 504 aa10.54□□□□□ -0.72
SSBP3-215ENST00000533946 KIAA1841Q6NSI8 718 aa10.54□□□□□ -0.72
SSBP3-215ENST00000533946 SHC4Q6S5L8 630 aa10.54□□□□□ -0.72
SSBP3-215ENST00000533946 KMT2EQ8IZD2 1858 aa10.54□□□□□ -0.72
SSBP3-215ENST00000533946 LINC00301Q8NCQ3 95 aa10.54□□□□□ -0.72
SSBP3-215ENST00000533946 KREMEN2Q8NCW0 462 aa10.54□□□□□ -0.72
SSBP3-215ENST00000533946 LARP4BQ92615 738 aaKnown RBP10.54□□□□□ -0.72
SSBP3-215ENST00000533946 EDAQ92838 391 aa10.54□□□□□ -0.72
SSBP3-215ENST00000533946 CALML4Q96GE6 196 aa10.54□□□□□ -0.72
SSBP3-215ENST00000533946 AK8Q96MA6 479 aa10.54□□□□□ -0.72
SSBP3-215ENST00000533946 ACAP3Q96P50 834 aa10.54□□□□□ -0.72
SSBP3-215ENST00000533946 ADPGKQ9BRR6 497 aa10.54□□□□□ -0.72
SSBP3-215ENST00000533946 STRA6Q9BX79 667 aa10.54□□□□□ -0.72
SSBP3-215ENST00000533946 C1QTNF1Q9BXJ1 281 aa10.54□□□□□ -0.72
SSBP3-215ENST00000533946 EMILIN2Q9BXX0 1053 aa10.54□□□□□ -0.72
SSBP3-215ENST00000533946 NT5C3AQ9H0P0 336 aa10.54□□□□□ -0.72
SSBP3-215ENST00000533946 FAM50BQ9Y247 325 aa10.54□□□□□ -0.72
SSBP3-215ENST00000533946 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.53□□□□□ -0.72
SSBP3-215ENST00000533946 TTC26A0AVF1 554 aa10.53□□□□□ -0.72
SSBP3-215ENST00000533946 TMEM221A6NGB7 291 aa10.53□□□□□ -0.72
SSBP3-215ENST00000533946 K7ENM7 598 aa10.53□□□□□ -0.72
SSBP3-215ENST00000533946 M0R296 226 aa10.53□□□□□ -0.72
SSBP3-215ENST00000533946 PODXLO00592 558 aa10.53□□□□□ -0.72
SSBP3-215ENST00000533946 SPTLC1O15269 473 aa10.53□□□□□ -0.72
SSBP3-215ENST00000533946 TRAK2O60296 914 aa10.53□□□□□ -0.72
SSBP3-215ENST00000533946 TOM1L1O75674 476 aa10.53□□□□□ -0.72
SSBP3-215ENST00000533946 FAM13AO94988 1023 aa10.53□□□□□ -0.72
SSBP3-215ENST00000533946 SEC24AO95486 1093 aa10.53□□□□□ -0.72
SSBP3-215ENST00000533946 GLUD1P00367 558 aa10.53□□□□□ -0.72
SSBP3-215ENST00000533946 OR4Q2P0C623 313 aa10.53□□□□□ -0.72
SSBP3-215ENST00000533946 KCNE1P15382 129 aa10.53□□□□□ -0.72
SSBP3-215ENST00000533946 OR1D2P34982 312 aa10.53□□□□□ -0.72
SSBP3-215ENST00000533946 HOXD13P35453 343 aa10.53□□□□□ -0.72
SSBP3-215ENST00000533946 NASPP49321 788 aaPredicted RBP10.53□□□□□ -0.72
SSBP3-215ENST00000533946 ACOT2P49753 483 aa10.53□□□□□ -0.72
SSBP3-215ENST00000533946 NOLC1Q14978 699 aaKnown RBP eCLIP10.53□□□□□ -0.72
SSBP3-215ENST00000533946 ZBTB6Q15916 424 aa10.53□□□□□ -0.72
SSBP3-215ENST00000533946 TPRNQ4KMQ1 711 aa10.53□□□□□ -0.72
SSBP3-215ENST00000533946 AXDND1Q5T1B0 1012 aaPredicted RBP10.53□□□□□ -0.72
SSBP3-215ENST00000533946 CRELD2Q6UXH1 353 aaPredicted RBP10.53□□□□□ -0.72
SSBP3-215ENST00000533946 TRIM67Q6ZTA4 783 aa10.53□□□□□ -0.72
SSBP3-215ENST00000533946 GRAMD1CQ8IYS0 662 aa10.53□□□□□ -0.72
SSBP3-215ENST00000533946 HACE1Q8IYU2 909 aa10.53□□□□□ -0.72
SSBP3-215ENST00000533946 TMEM87AQ8NBN3 555 aa10.53□□□□□ -0.72
SSBP3-215ENST00000533946 PIK3R5Q8WYR1 880 aa10.53□□□□□ -0.72
SSBP3-215ENST00000533946 DDX12PQ92771 950 aa10.53□□□□□ -0.72
SSBP3-215ENST00000533946 TMEM209Q96SK2 561 aa10.53□□□□□ -0.72
SSBP3-215ENST00000533946 TTPALQ9BTX7 342 aa10.53□□□□□ -0.72
SSBP3-215ENST00000533946 CRISPLD1Q9H336 500 aa10.53□□□□□ -0.72
SSBP3-215ENST00000533946 CNTN3Q9P232 1028 aa10.53□□□□□ -0.72
SSBP3-215ENST00000533946 RBM19Q9Y4C8 960 aaKnown RBP10.53□□□□□ -0.72
SSBP3-215ENST00000533946 CDY1Q9Y6F8 540 aa10.53□□□□□ -0.72
SSBP3-215ENST00000533946 A0A0B4J269 797 aa10.52□□□□□ -0.73
SSBP3-215ENST00000533946 PRR33A8MZF0 331 aa10.52□□□□□ -0.73
SSBP3-215ENST00000533946 CLDN3O15551 220 aa10.52□□□□□ -0.73
SSBP3-215ENST00000533946 TBC1D4O60343 1298 aa10.52□□□□□ -0.73
SSBP3-215ENST00000533946 PPP1R37O75864 691 aa10.52□□□□□ -0.73
SSBP3-215ENST00000533946 KRT18P05783 430 aaKnown RBP10.52□□□□□ -0.73
SSBP3-215ENST00000533946 ADH1AP07327 375 aa10.52□□□□□ -0.73
SSBP3-215ENST00000533946 NFICP08651 508 aa10.52□□□□□ -0.73
SSBP3-215ENST00000533946 ALADP13716 330 aa10.52□□□□□ -0.73
SSBP3-215ENST00000533946 ARPP19P56211 112 aa10.52□□□□□ -0.73
SSBP3-215ENST00000533946 GTF2BQ00403 316 aa10.52□□□□□ -0.73
SSBP3-215ENST00000533946 ITIH3Q06033 890 aa10.52□□□□□ -0.73
SSBP3-215ENST00000533946 E2F4Q16254 413 aa10.52□□□□□ -0.73
SSBP3-215ENST00000533946 PTPN21Q16825 1174 aa10.52□□□□□ -0.73
SSBP3-215ENST00000533946 ATAT1Q5SQI0 421 aa10.52□□□□□ -0.73
SSBP3-215ENST00000533946 CES5AQ6NT32 575 aa10.52□□□□□ -0.73
SSBP3-215ENST00000533946 DCLRE1AQ6PJP8 1040 aa10.52□□□□□ -0.73
SSBP3-215ENST00000533946 GRASPQ7Z6J2 395 aaPredicted RBP10.52□□□□□ -0.73
SSBP3-215ENST00000533946 RASSF8Q8NHQ8 419 aa10.52□□□□□ -0.73
SSBP3-215ENST00000533946 ITFG1Q8TB96 612 aa10.52□□□□□ -0.73
SSBP3-215ENST00000533946 SMG7Q92540 1137 aaKnown RBP10.52□□□□□ -0.73
SSBP3-215ENST00000533946 FAM212AQ96EL1 285 aa10.52□□□□□ -0.73
SSBP3-215ENST00000533946 BICD1Q96G01 975 aa10.52□□□□□ -0.73
SSBP3-215ENST00000533946 CCDC94Q9BW85 323 aaPredicted RBP10.52□□□□□ -0.73
SSBP3-215ENST00000533946 SFXN1Q9H9B4 322 aa10.52□□□□□ -0.73
SSBP3-215ENST00000533946 PARVGQ9HBI0 331 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms