RNA–Protein interactions for RNA: ENST00000533776.1

BRCA2-205, Transcript of BRCA2, DNA repair associated, human

TSL 3

Gene BRCA2, Length 523 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRCA2-205	ENST00000533776	FAM98A	Q8NCA5	519 aa	Known RBP	4.19	□□□□□ -1.74
BRCA2-205	ENST00000533776	STON2	Q8WXE9	905 aa		4.19	□□□□□ -1.74
BRCA2-205	ENST00000533776	SLC9A6	Q92581	669 aa		4.19	□□□□□ -1.74
BRCA2-205	ENST00000533776	LRFN3	Q9BTN0	628 aa		4.19	□□□□□ -1.74
BRCA2-205	ENST00000533776	DUSP26	Q9BV47	211 aa		4.19	□□□□□ -1.74
BRCA2-205	ENST00000533776	SPATA5L1	Q9BVQ7	753 aa		4.19	□□□□□ -1.74
BRCA2-205	ENST00000533776	ACE2	Q9BYF1	805 aa	Predicted RBP	4.19	□□□□□ -1.74
BRCA2-205	ENST00000533776	SENP6	Q9GZR1	1112 aa	Predicted RBP	4.19	□□□□□ -1.74
BRCA2-205	ENST00000533776	RNPEP	Q9H4A4	650 aa		4.19	□□□□□ -1.74
BRCA2-205	ENST00000533776	IFT122	Q9HBG6	1241 aa		4.19	□□□□□ -1.74
BRCA2-205	ENST00000533776	CASS4	Q9NQ75	786 aa		4.19	□□□□□ -1.74
BRCA2-205	ENST00000533776	LANCL2	Q9NS86	450 aa		4.19	□□□□□ -1.74
BRCA2-205	ENST00000533776	USP25	Q9UHP3	1055 aa		4.19	□□□□□ -1.74
BRCA2-205	ENST00000533776	GOLGA8A	A7E2F4	631 aa		4.18	□□□□□ -1.74
BRCA2-205	ENST00000533776	MGST3	O14880	152 aa		4.18	□□□□□ -1.74
BRCA2-205	ENST00000533776	ZEB2	O60315	1214 aa		4.18	□□□□□ -1.74
BRCA2-205	ENST00000533776	C1R	P00736	705 aa		4.18	□□□□□ -1.74
BRCA2-205	ENST00000533776	POMC	P01189	267 aa		4.18	□□□□□ -1.74
BRCA2-205	ENST00000533776	SLC6A2	P23975	617 aa		4.18	□□□□□ -1.74
BRCA2-205	ENST00000533776	ALDH1A3	P47895	512 aa		4.18	□□□□□ -1.74
BRCA2-205	ENST00000533776	CXADR	P78310	365 aa		4.18	□□□□□ -1.74
BRCA2-205	ENST00000533776	HSD11B2	P80365	405 aa		4.18	□□□□□ -1.74
BRCA2-205	ENST00000533776	ADRM1	Q16186	407 aa		4.18	□□□□□ -1.74
BRCA2-205	ENST00000533776	MUM1	Q2TAK8	710 aa		4.18	□□□□□ -1.74
BRCA2-205	ENST00000533776	TOR2A	Q5JU69	321 aa		4.18	□□□□□ -1.74
BRCA2-205	ENST00000533776	KRTAP5-1	Q6L8H4	278 aa		4.18	□□□□□ -1.74
BRCA2-205	ENST00000533776	FAM180A	Q6UWF9	173 aa		4.18	□□□□□ -1.74
BRCA2-205	ENST00000533776		Q6ZNX1	250 aa		4.18	□□□□□ -1.74
BRCA2-205	ENST00000533776	DDX46	Q7L014	1031 aa	Known RBP	4.18	□□□□□ -1.74
BRCA2-205	ENST00000533776	RNF180	Q86T96	592 aa		4.18	□□□□□ -1.74
BRCA2-205	ENST00000533776	ARHGEF25	Q86VW2	580 aa		4.18	□□□□□ -1.74
BRCA2-205	ENST00000533776	UBR7	Q8N806	425 aa		4.18	□□□□□ -1.74
BRCA2-205	ENST00000533776	NELL1	Q92832	810 aa		4.18	□□□□□ -1.74
BRCA2-205	ENST00000533776	FATE1	Q969F0	183 aa		4.18	□□□□□ -1.74
BRCA2-205	ENST00000533776	GREM2	Q9H772	168 aa		4.18	□□□□□ -1.74
BRCA2-205	ENST00000533776	ALG13	Q9NP73	1137 aa	Known RBP	4.18	□□□□□ -1.74
BRCA2-205	ENST00000533776	RBM12	Q9NTZ6	932 aa	Known RBP	4.18	□□□□□ -1.74
BRCA2-205	ENST00000533776	TBCCD1	Q9NVR7	557 aa		4.18	□□□□□ -1.74
BRCA2-205	ENST00000533776	MOCS1	Q9NZB8	636 aa		4.18	□□□□□ -1.74
BRCA2-205	ENST00000533776	AJAP1	Q9UKB5	411 aa	Predicted RBP	4.18	□□□□□ -1.74
BRCA2-205	ENST00000533776	SIK3	Q9Y2K2	1263 aa		4.18	□□□□□ -1.74
BRCA2-205	ENST00000533776	PRSS23	O95084	383 aa		4.17	□□□□□ -1.74
BRCA2-205	ENST00000533776	GPANK1	O95872	356 aa		4.17	□□□□□ -1.74
BRCA2-205	ENST00000533776	ERBB2	P04626	1255 aa		4.17	□□□□□ -1.74
BRCA2-205	ENST00000533776	IL2RB	P14784	551 aa		4.17	□□□□□ -1.74
BRCA2-205	ENST00000533776	FPR1	P21462	350 aa		4.17	□□□□□ -1.74
BRCA2-205	ENST00000533776	GCSH	P23434	173 aa		4.17	□□□□□ -1.74
BRCA2-205	ENST00000533776	KRTAP5-9	P26371	169 aa		4.17	□□□□□ -1.74
BRCA2-205	ENST00000533776	SCAND1	P57086	179 aa		4.17	□□□□□ -1.74
BRCA2-205	ENST00000533776	SIM1	P81133	766 aa	Predicted RBP	4.17	□□□□□ -1.74
BRCA2-205	ENST00000533776	ZNF169	Q14929	603 aa	Predicted RBP	4.17	□□□□□ -1.74
BRCA2-205	ENST00000533776	NOMO1	Q15155	1222 aa		4.17	□□□□□ -1.74
BRCA2-205	ENST00000533776	MUM1L1	Q5H9M0	696 aa		4.17	□□□□□ -1.74
BRCA2-205	ENST00000533776	ZNF362	Q5T0B9	420 aa	Predicted RBP	4.17	□□□□□ -1.74
BRCA2-205	ENST00000533776	ZNF529	Q6P280	563 aa		4.17	□□□□□ -1.74
BRCA2-205	ENST00000533776	UBE3B	Q7Z3V4	1068 aa		4.17	□□□□□ -1.74
BRCA2-205	ENST00000533776	STRA8	Q7Z7C7	330 aa		4.17	□□□□□ -1.74
BRCA2-205	ENST00000533776	THNSL2	Q86YJ6	484 aa		4.17	□□□□□ -1.74
BRCA2-205	ENST00000533776	MYOC	Q99972	504 aa		4.17	□□□□□ -1.74
BRCA2-205	ENST00000533776	GALNT9	Q9HCQ5	603 aa		4.17	□□□□□ -1.74
BRCA2-205	ENST00000533776	FBXO34	Q9NWN3	711 aa		4.17	□□□□□ -1.74
BRCA2-205	ENST00000533776	LRIT1	Q9P2V4	623 aa		4.17	□□□□□ -1.74
BRCA2-205	ENST00000533776	SCOC	Q9UIL1	159 aa		4.17	□□□□□ -1.74
BRCA2-205	ENST00000533776	MTO1	Q9Y2Z2	717 aa	Known RBP	4.17	□□□□□ -1.74
BRCA2-205	ENST00000533776	ENPP3	O14638	875 aa		4.16	□□□□□ -1.74
BRCA2-205	ENST00000533776	ERN1	O75460	977 aa	Known RBP	4.16	□□□□□ -1.74
BRCA2-205	ENST00000533776	IGLV2-14	P01704	120 aa		4.16	□□□□□ -1.74
BRCA2-205	ENST00000533776	CDK4	P11802	303 aa		4.16	□□□□□ -1.74
BRCA2-205	ENST00000533776	GUCY1A2	P33402	732 aa		4.16	□□□□□ -1.74
BRCA2-205	ENST00000533776	SRSF2	Q01130	221 aa	Known RBP	4.16	□□□□□ -1.74
BRCA2-205	ENST00000533776	PPP3CA	Q08209	521 aa		4.16	□□□□□ -1.74
BRCA2-205	ENST00000533776	UBXN2B	Q14CS0	331 aa		4.16	□□□□□ -1.74
BRCA2-205	ENST00000533776	GJC2	Q5T442	439 aa	Predicted RBP	4.16	□□□□□ -1.74
BRCA2-205	ENST00000533776	FOXR2	Q6PJQ5	311 aa		4.16	□□□□□ -1.74
BRCA2-205	ENST00000533776	ACTRT2	Q8TDY3	377 aa		4.16	□□□□□ -1.74
BRCA2-205	ENST00000533776	ZNF384	Q8TF68	577 aa		4.16	□□□□□ -1.74
BRCA2-205	ENST00000533776	LMBR1	Q8WVP7	490 aa		4.16	□□□□□ -1.74
BRCA2-205	ENST00000533776	HOXB13	Q92826	284 aa	Predicted RBP	4.16	□□□□□ -1.74
BRCA2-205	ENST00000533776	NACC2	Q96BF6	587 aa		4.16	□□□□□ -1.74
BRCA2-205	ENST00000533776	BOD1	Q96IK1	185 aa		4.16	□□□□□ -1.74
BRCA2-205	ENST00000533776	AIFM2	Q9BRQ8	373 aa		4.16	□□□□□ -1.74
BRCA2-205	ENST00000533776	ADI1	Q9BV57	179 aa		4.16	□□□□□ -1.74
BRCA2-205	ENST00000533776	VTA1	Q9NP79	307 aa		4.16	□□□□□ -1.74
BRCA2-205	ENST00000533776	TMEM74B	Q9NUR3	256 aa		4.16	□□□□□ -1.74
BRCA2-205	ENST00000533776	KCNE5	Q9UJ90	142 aa		4.16	□□□□□ -1.74
BRCA2-205	ENST00000533776	ZBTB21	Q9ULJ3	1066 aa		4.16	□□□□□ -1.74
BRCA2-205	ENST00000533776	RUVBL1	Q9Y265	456 aa	Known RBP	4.16	□□□□□ -1.74
BRCA2-205	ENST00000533776	ACTL7A	Q9Y615	435 aa		4.16	□□□□□ -1.74
BRCA2-205	ENST00000533776	MATN4	O95460	622 aa		4.15	□□□□□ -1.75
BRCA2-205	ENST00000533776	MTHFD2	P13995	350 aa		4.15	□□□□□ -1.75
BRCA2-205	ENST00000533776	GYS2	P54840	703 aa		4.15	□□□□□ -1.75
BRCA2-205	ENST00000533776	MRPS35	P82673	323 aa	Known RBP	4.15	□□□□□ -1.75
BRCA2-205	ENST00000533776	TAF7L	Q5H9L4	462 aa		4.15	□□□□□ -1.75
BRCA2-205	ENST00000533776	OTUD7B	Q6GQQ9	843 aa		4.15	□□□□□ -1.75
BRCA2-205	ENST00000533776	KCNK18	Q7Z418	384 aa		4.15	□□□□□ -1.75
BRCA2-205	ENST00000533776	FAM43A	Q8N2R8	423 aa		4.15	□□□□□ -1.75
BRCA2-205	ENST00000533776	FUBP1	Q96AE4	644 aa	Known RBP	4.15	□□□□□ -1.75
BRCA2-205	ENST00000533776	UNKL	Q9H9P5	680 aa	Known RBP	4.15	□□□□□ -1.75
BRCA2-205	ENST00000533776	TMEM140	Q9NV12	185 aa		4.15	□□□□□ -1.75
BRCA2-205	ENST00000533776	FOXJ2	Q9P0K8	574 aa		4.15	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms