RNA–Protein interactions for RNA: ENST00000533733.5

ATM-222, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-222ENST00000533733 KCTD16Q68DU8 428 aa12.8□□□□□ -0.36
ATM-222ENST00000533733 ZPBP2Q6X784 338 aa12.8□□□□□ -0.36
ATM-222ENST00000533733 CEP128Q6ZU80 1094 aa12.8□□□□□ -0.36
ATM-222ENST00000533733 DEPTORQ8TB45 409 aa12.8□□□□□ -0.36
ATM-222ENST00000533733 WNK4Q96J92 1243 aa12.8□□□□□ -0.36
ATM-222ENST00000533733 CGRRF1Q99675 332 aa12.8□□□□□ -0.36
ATM-222ENST00000533733 SH2D3AQ9BRG2 576 aa12.8□□□□□ -0.36
ATM-222ENST00000533733 FAM213AQ9BRX8 229 aa12.8□□□□□ -0.36
ATM-222ENST00000533733 DPH5Q9H2P9 285 aa12.8□□□□□ -0.36
ATM-222ENST00000533733 PLEKHA4Q9H4M7 779 aa12.8□□□□□ -0.36
ATM-222ENST00000533733 GJA3Q9Y6H8 435 aa12.8□□□□□ -0.36
ATM-222ENST00000533733 SCINQ9Y6U3 715 aa12.8□□□□□ -0.36
ATM-222ENST00000533733 PAPPA2Q9BXP8 1791 aa12.8□□□□□ -0.36
ATM-222ENST00000533733 K7ERI5 159 aa12.79□□□□□ -0.36
ATM-222ENST00000533733 MYO1FO00160 1098 aa12.79□□□□□ -0.36
ATM-222ENST00000533733 GRIN3BO60391 1043 aa12.79□□□□□ -0.36
ATM-222ENST00000533733 CYP1A1P04798 512 aaPredicted RBP12.79□□□□□ -0.36
ATM-222ENST00000533733 KRT5P13647 590 aa12.79□□□□□ -0.36
ATM-222ENST00000533733 TNNI1P19237 187 aa12.79□□□□□ -0.36
ATM-222ENST00000533733 MAPK4P31152 587 aa12.79□□□□□ -0.36
ATM-222ENST00000533733 MAGEA9P43362 315 aa12.79□□□□□ -0.36
ATM-222ENST00000533733 NSFP46459 744 aaKnown RBP12.79□□□□□ -0.36
ATM-222ENST00000533733 EFNA5P52803 228 aa12.79□□□□□ -0.36
ATM-222ENST00000533733 PMS2P54278 862 aa12.79□□□□□ -0.36
ATM-222ENST00000533733 ADCY2Q08462 1091 aa12.79□□□□□ -0.36
ATM-222ENST00000533733 ZNF211Q13398 564 aaPredicted RBP12.79□□□□□ -0.36
ATM-222ENST00000533733 MTERF2Q49AM1 385 aa12.79□□□□□ -0.36
ATM-222ENST00000533733 ANGEL2Q5VTE6 544 aaKnown RBP12.79□□□□□ -0.36
ATM-222ENST00000533733 DENND2CQ68D51 928 aa12.79□□□□□ -0.36
ATM-222ENST00000533733 KCNV1Q6PIU1 500 aa12.79□□□□□ -0.36
ATM-222ENST00000533733 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.79□□□□□ -0.36
ATM-222ENST00000533733 TAS1R3Q7RTX0 852 aa12.79□□□□□ -0.36
ATM-222ENST00000533733 YTHDF3Q7Z739 585 aaKnown RBP12.79□□□□□ -0.36
ATM-222ENST00000533733 MCOLN2Q8IZK6 566 aa12.79□□□□□ -0.36
ATM-222ENST00000533733 KRT35Q92764 455 aa12.79□□□□□ -0.36
ATM-222ENST00000533733 ZKSCAN4Q969J2 545 aaPredicted RBP12.79□□□□□ -0.36
ATM-222ENST00000533733 CENPTQ96BT3 561 aa12.79□□□□□ -0.36
ATM-222ENST00000533733 PGM2Q96G03 612 aa12.79□□□□□ -0.36
ATM-222ENST00000533733 TRIM51Q9BSJ1 452 aa12.79□□□□□ -0.36
ATM-222ENST00000533733 KIFC3Q9BVG8 833 aa12.79□□□□□ -0.36
ATM-222ENST00000533733 ERVK-5Q9HDB9 667 aa12.79□□□□□ -0.36
ATM-222ENST00000533733 WHRNQ9P202 907 aa12.79□□□□□ -0.36
ATM-222ENST00000533733 CNTN6Q9UQ52 1028 aa12.79□□□□□ -0.36
ATM-222ENST00000533733 A0A087WUV0 522 aaPredicted RBP12.79□□□□□ -0.36
ATM-222ENST00000533733 TMEM110-MUSTN1A8MSY1 372 aa12.79□□□□□ -0.36
ATM-222ENST00000533733 NDC80O14777 642 aa12.79□□□□□ -0.36
ATM-222ENST00000533733 PSTPIP1O43586 416 aa12.79□□□□□ -0.36
ATM-222ENST00000533733 ECEL1O95672 775 aa12.79□□□□□ -0.36
ATM-222ENST00000533733 HLA-DRAP01903 254 aa12.79□□□□□ -0.36
ATM-222ENST00000533733 PYGMP11217 842 aa12.79□□□□□ -0.36
ATM-222ENST00000533733 CETN2P41208 172 aa12.79□□□□□ -0.36
ATM-222ENST00000533733 PIK3CAP42336 1068 aa12.79□□□□□ -0.36
ATM-222ENST00000533733 CALCOCO2Q13137 446 aa12.79□□□□□ -0.36
ATM-222ENST00000533733 PDCLQ13371 301 aa12.79□□□□□ -0.36
ATM-222ENST00000533733 PTGISQ16647 500 aa12.79□□□□□ -0.36
ATM-222ENST00000533733 KRT71Q3SY84 523 aa12.79□□□□□ -0.36
ATM-222ENST00000533733 C6orf118Q5T5N4 469 aa12.79□□□□□ -0.36
ATM-222ENST00000533733 NAA35Q5VZE5 725 aa12.79□□□□□ -0.36
ATM-222ENST00000533733 RIOX2Q8IUF8 465 aa12.79□□□□□ -0.36
ATM-222ENST00000533733 CCDC105Q8IYK2 499 aa12.79□□□□□ -0.36
ATM-222ENST00000533733 SH2D3CQ8N5H7 860 aa12.79□□□□□ -0.36
ATM-222ENST00000533733 BBOF1Q8ND07 529 aa12.79□□□□□ -0.36
ATM-222ENST00000533733 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.79□□□□□ -0.36
ATM-222ENST00000533733 TCP11Q8WWU5 503 aa12.79□□□□□ -0.36
ATM-222ENST00000533733 PPM1EQ8WY54 764 aa12.79□□□□□ -0.36
ATM-222ENST00000533733 TATDN2Q93075 761 aa12.79□□□□□ -0.36
ATM-222ENST00000533733 POP1Q99575 1024 aaKnown RBP12.79□□□□□ -0.36
ATM-222ENST00000533733 IMPG2Q9BZV3 1241 aa12.79□□□□□ -0.36
ATM-222ENST00000533733 ROPN1BQ9BZX4 212 aaPredicted RBP12.79□□□□□ -0.36
ATM-222ENST00000533733 ROPN1Q9HAT0 212 aaPredicted RBP12.79□□□□□ -0.36
ATM-222ENST00000533733 NR2E1Q9Y466 385 aa12.79□□□□□ -0.36
ATM-222ENST00000533733 LOC102724159A0A0B4J2E5 919 aa12.78□□□□□ -0.36
ATM-222ENST00000533733 FAM107AO95990 144 aa12.78□□□□□ -0.36
ATM-222ENST00000533733 RARGP13631 454 aa12.78□□□□□ -0.36
ATM-222ENST00000533733 CCT5P48643 541 aa12.78□□□□□ -0.36
ATM-222ENST00000533733 ATP1A2P50993 1020 aa12.78□□□□□ -0.36
ATM-222ENST00000533733 C1QBPQ07021 282 aaKnown RBP12.78□□□□□ -0.36
ATM-222ENST00000533733 CUL2Q13617 745 aa12.78□□□□□ -0.36
ATM-222ENST00000533733 PWP2Q15269 919 aaKnown RBP12.78□□□□□ -0.36
ATM-222ENST00000533733 ODF2Q5BJF6 829 aa12.78□□□□□ -0.36
ATM-222ENST00000533733 TRMT10CQ7L0Y3 403 aaKnown RBP12.78□□□□□ -0.36
ATM-222ENST00000533733 CCDC125Q86Z20 511 aa12.78□□□□□ -0.36
ATM-222ENST00000533733 ANKRD35Q8N283 1001 aa12.78□□□□□ -0.36
ATM-222ENST00000533733 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.78□□□□□ -0.36
ATM-222ENST00000533733 TLCD1Q96CP7 247 aa12.78□□□□□ -0.36
ATM-222ENST00000533733 JPH2Q9BR39 696 aaPredicted RBP12.78□□□□□ -0.36
ATM-222ENST00000533733 TOPORSQ9NS56 1045 aaPredicted RBP12.78□□□□□ -0.36
ATM-222ENST00000533733 RBAKQ9NYW8 714 aaPredicted RBP12.78□□□□□ -0.36
ATM-222ENST00000533733 SLC12A6Q9UHW9 1150 aa12.78□□□□□ -0.36
ATM-222ENST00000533733 ANAPC7Q9UJX3 599 aa12.78□□□□□ -0.36
ATM-222ENST00000533733 ATP8A1Q9Y2Q0 1164 aa12.78□□□□□ -0.36
ATM-222ENST00000533733 A0A0B4J269 797 aa12.77□□□□□ -0.36
ATM-222ENST00000533733 GAS8O95995 478 aa12.77□□□□□ -0.36
ATM-222ENST00000533733 ITIH2P19823 946 aa12.77□□□□□ -0.36
ATM-222ENST00000533733 GLRA2P23416 452 aa12.77□□□□□ -0.36
ATM-222ENST00000533733 EDNRBP24530 442 aa12.77□□□□□ -0.36
ATM-222ENST00000533733 ALDH5A1P51649 535 aaPredicted RBP12.77□□□□□ -0.36
ATM-222ENST00000533733 PLTPP55058 493 aa12.77□□□□□ -0.36
ATM-222ENST00000533733 FOXR1Q6PIV2 292 aa12.77□□□□□ -0.36
ATM-222ENST00000533733 ZDHHC24Q6UX98 284 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms