RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 ARHGEF3Q9NR81 526 aa9.59□□□□□ -0.87
COPB1-210ENST00000533533 SLC2A4RGQ9NR83 387 aa9.59□□□□□ -0.87
COPB1-210ENST00000533533 DLGAP2Q9P1A6 1054 aa9.59□□□□□ -0.87
COPB1-210ENST00000533533 ADAM28Q9UKQ2 775 aa9.59□□□□□ -0.87
COPB1-210ENST00000533533 SIT1Q9Y3P8 196 aa9.59□□□□□ -0.87
COPB1-210ENST00000533533 R4GN57 208 aa9.59□□□□□ -0.87
COPB1-210ENST00000533533 TADA2AO75478 443 aa9.58□□□□□ -0.88
COPB1-210ENST00000533533 ZMYND10O75800 440 aa9.58□□□□□ -0.88
COPB1-210ENST00000533533 DCNP07585 359 aaKnown RBP9.58□□□□□ -0.88
COPB1-210ENST00000533533 RPL17P18621 184 aaKnown RBP9.58□□□□□ -0.88
COPB1-210ENST00000533533 LIG1P18858 919 aa9.58□□□□□ -0.88
COPB1-210ENST00000533533 MUTP22033 750 aa9.58□□□□□ -0.88
COPB1-210ENST00000533533 ARL2P36404 184 aa9.58□□□□□ -0.88
COPB1-210ENST00000533533 LONP1P36776 959 aaKnown RBP9.58□□□□□ -0.88
COPB1-210ENST00000533533 TXLNAP40222 546 aa9.58□□□□□ -0.88
COPB1-210ENST00000533533 GRIK3Q13003 919 aa9.58□□□□□ -0.88
COPB1-210ENST00000533533 PTPAQ15257 358 aa9.58□□□□□ -0.88
COPB1-210ENST00000533533 SLC27A1Q6PCB7 646 aa9.58□□□□□ -0.88
COPB1-210ENST00000533533 DCLRE1AQ6PJP8 1040 aa9.58□□□□□ -0.88
COPB1-210ENST00000533533 GET4Q7L5D6 327 aaPredicted RBP9.58□□□□□ -0.88
COPB1-210ENST00000533533 C1orf210Q8IVY1 113 aa9.58□□□□□ -0.88
COPB1-210ENST00000533533 MCPH1Q8NEM0 835 aa9.58□□□□□ -0.88
COPB1-210ENST00000533533 RABGGTAQ92696 567 aa9.58□□□□□ -0.88
COPB1-210ENST00000533533 AK8Q96MA6 479 aa9.58□□□□□ -0.88
COPB1-210ENST00000533533 CLIC6Q96NY7 704 aa9.58□□□□□ -0.88
COPB1-210ENST00000533533 MMTAG2Q9BU76 263 aaKnown RBP9.58□□□□□ -0.88
COPB1-210ENST00000533533 POLD4Q9HCU8 107 aa9.58□□□□□ -0.88
COPB1-210ENST00000533533 GPRC5CQ9NQ84 441 aa9.58□□□□□ -0.88
COPB1-210ENST00000533533 KLK14Q9P0G3 267 aa9.58□□□□□ -0.88
COPB1-210ENST00000533533 ZFP37Q9Y6Q3 630 aaPredicted RBP9.58□□□□□ -0.88
COPB1-210ENST00000533533 NUMBLQ9Y6R0 609 aa9.58□□□□□ -0.88
COPB1-210ENST00000533533 ZMYM2Q9UBW7 1377 aa9.58□□□□□ -0.88
COPB1-210ENST00000533533 SDK1Q7Z5N4 2213 aa9.58□□□□□ -0.88
COPB1-210ENST00000533533 SF3B1O75533 1304 aaKnown RBP eCLIP9.57□□□□□ -0.888e-14■■■■■ 28.8
COPB1-210ENST00000533533 MAP1BP46821 2468 aaKnown RBP9.57□□□□□ -0.88
COPB1-210ENST00000533533 A0A1B0GUA9 196 aa9.57□□□□□ -0.88
COPB1-210ENST00000533533 LRRIQ4A6NIV6 560 aa9.57□□□□□ -0.88
COPB1-210ENST00000533533 SPTLC2O15270 562 aa9.57□□□□□ -0.88
COPB1-210ENST00000533533 B4GALT5O43286 388 aa9.57□□□□□ -0.88
COPB1-210ENST00000533533 NPTXRO95502 500 aa9.57□□□□□ -0.88
COPB1-210ENST00000533533 SP9P0CG40 484 aa9.57□□□□□ -0.88
COPB1-210ENST00000533533 GLRA2P23416 452 aa9.57□□□□□ -0.88
COPB1-210ENST00000533533 FSHRP23945 695 aa9.57□□□□□ -0.88
COPB1-210ENST00000533533 ANP32AP39687 249 aaKnown RBP9.57□□□□□ -0.88
COPB1-210ENST00000533533 DNM1Q05193 864 aaKnown RBP9.57□□□□□ -0.88
COPB1-210ENST00000533533 RAD51AP2Q09MP3 1159 aa9.57□□□□□ -0.88
COPB1-210ENST00000533533 SLC39A14Q15043 492 aa9.57□□□□□ -0.88
COPB1-210ENST00000533533 KARSQ15046 597 aaKnown RBP9.57□□□□□ -0.88
COPB1-210ENST00000533533 TMEM132AQ24JP5 1023 aa9.57□□□□□ -0.88
COPB1-210ENST00000533533 RTP2Q5QGT7 225 aa9.57□□□□□ -0.88
COPB1-210ENST00000533533 ZC3H14Q6PJT7 736 aaKnown RBP9.57□□□□□ -0.88
COPB1-210ENST00000533533 PRSS55Q6UWB4 352 aaPredicted RBP9.57□□□□□ -0.88
COPB1-210ENST00000533533 CDR2LQ86X02 465 aaPredicted RBP9.57□□□□□ -0.88
COPB1-210ENST00000533533 KRI1Q8N9T8 703 aaKnown RBP9.57□□□□□ -0.88
COPB1-210ENST00000533533 ST13P5Q8NFI4 369 aaPredicted RBP9.57□□□□□ -0.88
COPB1-210ENST00000533533 RMDN1Q96DB5 314 aa9.57□□□□□ -0.88
COPB1-210ENST00000533533 EPSTI1Q96J88 318 aa9.57□□□□□ -0.88
COPB1-210ENST00000533533 PNMA5Q96PV4 448 aa9.57□□□□□ -0.88
COPB1-210ENST00000533533 TTPALQ9BTX7 342 aa9.57□□□□□ -0.88
COPB1-210ENST00000533533 RPP25Q9BUL9 199 aaKnown RBP9.57□□□□□ -0.88
COPB1-210ENST00000533533 FOXQ1Q9C009 403 aa9.57□□□□□ -0.88
COPB1-210ENST00000533533 CCDC39Q9UFE4 941 aa9.57□□□□□ -0.88
COPB1-210ENST00000533533 PARP2Q9UGN5 583 aa9.57□□□□□ -0.88
COPB1-210ENST00000533533 FBXO2Q9UK22 296 aaPredicted RBP9.57□□□□□ -0.88
COPB1-210ENST00000533533 FBXW11Q9UKB1 542 aa9.57□□□□□ -0.88
COPB1-210ENST00000533533 SRPRBQ9Y5M8 271 aaKnown RBP9.57□□□□□ -0.88
COPB1-210ENST00000533533 KRT18P05783 430 aaKnown RBP9.56□□□□□ -0.88
COPB1-210ENST00000533533 HNRNPA1P09651 372 aaKnown RBP eCLIP9.56□□□□□ -0.88
COPB1-210ENST00000533533 PLA2G4BP0C869 781 aa9.56□□□□□ -0.88
COPB1-210ENST00000533533 GLULP15104 373 aa9.56□□□□□ -0.88
COPB1-210ENST00000533533 CYP11B2P19099 503 aa9.56□□□□□ -0.88
COPB1-210ENST00000533533 PLCG1P19174 1290 aa9.56□□□□□ -0.88
COPB1-210ENST00000533533 ME1P48163 572 aa9.56□□□□□ -0.88
COPB1-210ENST00000533533 NASPP49321 788 aaPredicted RBP9.56□□□□□ -0.88
COPB1-210ENST00000533533 STARD6P59095 220 aa9.56□□□□□ -0.88
COPB1-210ENST00000533533 GPC5P78333 572 aa9.56□□□□□ -0.88
COPB1-210ENST00000533533 TUSC3Q13454 348 aa9.56□□□□□ -0.88
COPB1-210ENST00000533533 HSP90AA2PQ14568 343 aaPredicted RBP9.56□□□□□ -0.88
COPB1-210ENST00000533533 LIN9Q5TKA1 542 aa9.56□□□□□ -0.88
COPB1-210ENST00000533533 PARM1Q6UWI2 310 aa9.56□□□□□ -0.88
COPB1-210ENST00000533533 KCNK18Q7Z418 384 aa9.56□□□□□ -0.88
COPB1-210ENST00000533533 GRASPQ7Z6J2 395 aaPredicted RBP9.56□□□□□ -0.88
COPB1-210ENST00000533533 ZBTB8OSQ8IWT0 167 aa9.56□□□□□ -0.88
COPB1-210ENST00000533533 KIAA2013Q8IYS2 634 aa9.56□□□□□ -0.88
COPB1-210ENST00000533533 LINC00301Q8NCQ3 95 aa9.56□□□□□ -0.88
COPB1-210ENST00000533533 PJA1Q8NG27 643 aa9.56□□□□□ -0.88
COPB1-210ENST00000533533 DEPTORQ8TB45 409 aa9.56□□□□□ -0.88
COPB1-210ENST00000533533 PIK3R5Q8WYR1 880 aa9.56□□□□□ -0.88
COPB1-210ENST00000533533 FGF14Q92915 247 aa9.56□□□□□ -0.88
COPB1-210ENST00000533533 SHDQ96IW2 340 aa9.56□□□□□ -0.88
COPB1-210ENST00000533533 IFT74Q96LB3 600 aa9.56□□□□□ -0.88
COPB1-210ENST00000533533 CLSTN3Q9BQT9 956 aa9.56□□□□□ -0.88
COPB1-210ENST00000533533 PAAF1Q9BRP4 392 aa9.56□□□□□ -0.88
COPB1-210ENST00000533533 PANK2Q9BZ23 570 aa9.56□□□□□ -0.88
COPB1-210ENST00000533533 CACNG4Q9UBN1 327 aa9.56□□□□□ -0.88
COPB1-210ENST00000533533 CFAP45Q9UL16 551 aa9.56□□□□□ -0.88
COPB1-210ENST00000533533 CDH7Q9ULB5 785 aa9.56□□□□□ -0.88
COPB1-210ENST00000533533 PATJQ8NI35 1801 aa9.56□□□□□ -0.88
COPB1-210ENST00000533533 CASTOR2A6NHX0 329 aa9.55□□□□□ -0.88
COPB1-210ENST00000533533 CCDC169A6NNP5 214 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms