RNA–Protein interactions for RNA: ENST00000533415.5

CDC27-210, Transcript of cell division cycle 27, humanhuman

TSL 2

Gene CDC27, Length 2,570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-210ENST00000533415 POLIQ9UNA4 740 aa14.54□□□□□ -0.08
CDC27-210ENST00000533415 PIN4Q9Y237 131 aaKnown RBP14.54□□□□□ -0.08
CDC27-210ENST00000533415 RRN3P2A6NIE6 340 aa14.54□□□□□ -0.08
CDC27-210ENST00000533415 ASAP2O43150 1006 aa14.54□□□□□ -0.08
CDC27-210ENST00000533415 ABCB4P21439 1286 aa14.54□□□□□ -0.08
CDC27-210ENST00000533415 CETN1Q12798 172 aa14.54□□□□□ -0.08
CDC27-210ENST00000533415 SNX17Q15036 470 aa14.54□□□□□ -0.08
CDC27-210ENST00000533415 CGRRF1Q99675 332 aa14.54□□□□□ -0.08
CDC27-210ENST00000533415 MTG1Q9BT17 334 aaPredicted RBP14.54□□□□□ -0.08
CDC27-210ENST00000533415 TNFSF13BQ9Y275 285 aa14.54□□□□□ -0.08
CDC27-210ENST00000533415 MAPK13O15264 365 aa14.53□□□□□ -0.08
CDC27-210ENST00000533415 NCK2O43639 380 aa14.53□□□□□ -0.08
CDC27-210ENST00000533415 SRGAP2O75044 1071 aa14.53□□□□□ -0.08
CDC27-210ENST00000533415 IGFBP6P24592 240 aaPredicted RBP14.53□□□□□ -0.08
CDC27-210ENST00000533415 NFX1Q12986 1120 aaKnown RBP14.53□□□□□ -0.08
CDC27-210ENST00000533415 NCOA4Q13772 614 aa14.53□□□□□ -0.08
CDC27-210ENST00000533415 SLC10A6Q3KNW5 377 aa14.53□□□□□ -0.08
CDC27-210ENST00000533415 TRAPPC11Q7Z392 1133 aa14.53□□□□□ -0.08
CDC27-210ENST00000533415 NOP9Q86U38 636 aaKnown RBP14.53□□□□□ -0.08
CDC27-210ENST00000533415 TMEM174Q8WUU8 243 aa14.53□□□□□ -0.08
CDC27-210ENST00000533415 RABGGTAQ92696 567 aa14.53□□□□□ -0.08
CDC27-210ENST00000533415 NT5C1BQ96P26 610 aa14.53□□□□□ -0.08
CDC27-210ENST00000533415 NXF1Q9UBU9 619 aaKnown RBP14.53□□□□□ -0.08
CDC27-210ENST00000533415 PPME1Q9Y570 386 aa14.53□□□□□ -0.08
CDC27-210ENST00000533415 PPEF2O14830 753 aa14.53□□□□□ -0.08
CDC27-210ENST00000533415 ATMINO43313 823 aaPredicted RBP14.53□□□□□ -0.08
CDC27-210ENST00000533415 WEE2P0C1S8 567 aa14.53□□□□□ -0.08
CDC27-210ENST00000533415 NAP1L1P55209 391 aaKnown RBP14.53□□□□□ -0.08
CDC27-210ENST00000533415 MTFR1Q15390 333 aa14.53□□□□□ -0.08
CDC27-210ENST00000533415 LLGL2Q6P1M3 1020 aa14.53□□□□□ -0.08
CDC27-210ENST00000533415 EXOC8Q8IYI6 725 aa14.53□□□□□ -0.08
CDC27-210ENST00000533415 CCDC170Q8IYT3 715 aa14.53□□□□□ -0.08
CDC27-210ENST00000533415 RPF1Q9H9Y2 349 aaKnown RBP14.53□□□□□ -0.08
CDC27-210ENST00000533415 NOC2LQ9Y3T9 749 aaKnown RBP14.53□□□□□ -0.08
CDC27-210ENST00000533415 IPO7O95373 1038 aaKnown RBP14.52□□□□□ -0.08
CDC27-210ENST00000533415 HMGCRP04035 888 aa14.52□□□□□ -0.08
CDC27-210ENST00000533415 MMEP08473 750 aa14.52□□□□□ -0.08
CDC27-210ENST00000533415 DARSP14868 501 aaKnown RBP14.52□□□□□ -0.08
CDC27-210ENST00000533415 AFF1P51825 1210 aaKnown RBP14.52□□□□□ -0.08
CDC27-210ENST00000533415 CDH8P55286 799 aa14.52□□□□□ -0.08
CDC27-210ENST00000533415 PASD1Q8IV76 773 aa14.52□□□□□ -0.08
CDC27-210ENST00000533415 KIF18AQ8NI77 898 aa14.52□□□□□ -0.08
CDC27-210ENST00000533415 C18orf25Q96B23 403 aaPredicted RBP14.52□□□□□ -0.08
CDC27-210ENST00000533415 ZMAT2Q96NC0 199 aaKnown RBP14.52□□□□□ -0.08
CDC27-210ENST00000533415 PCDHB18PQ96TA0 734 aa14.52□□□□□ -0.08
CDC27-210ENST00000533415 GCOM2Q9BZD3 368 aaPredicted RBP14.52□□□□□ -0.08
CDC27-210ENST00000533415 EDEM3Q9BZQ6 932 aa14.52□□□□□ -0.08
CDC27-210ENST00000533415 PACSIN2Q9UNF0 486 aaPredicted RBP14.52□□□□□ -0.08
CDC27-210ENST00000533415 HYOU1Q9Y4L1 999 aa14.52□□□□□ -0.08
CDC27-210ENST00000533415 CDY2AQ9Y6F7 541 aa14.52□□□□□ -0.08
CDC27-210ENST00000533415 TRIP11Q15643 1979 aa14.52□□□□□ -0.08
CDC27-210ENST00000533415 UQCRHLA0A096LP55 91 aa14.52□□□□□ -0.09
CDC27-210ENST00000533415 SMIM35A0A1B0GVV1 85 aa14.52□□□□□ -0.09
CDC27-210ENST00000533415 UQCRHP07919 91 aa14.52□□□□□ -0.09
CDC27-210ENST00000533415 EIF4BP23588 611 aaKnown RBP14.52□□□□□ -0.09
CDC27-210ENST00000533415 CASQ1P31415 396 aa14.52□□□□□ -0.09
CDC27-210ENST00000533415 MAP2K2P36507 400 aa14.52□□□□□ -0.09
CDC27-210ENST00000533415 VAV2P52735 878 aa14.52□□□□□ -0.09
CDC27-210ENST00000533415 CDK17Q00537 523 aa14.52□□□□□ -0.09
CDC27-210ENST00000533415 RPUSD2Q8IZ73 545 aaKnown RBP14.52□□□□□ -0.09
CDC27-210ENST00000533415 TRPV6Q9H1D0 765 aa14.52□□□□□ -0.09
CDC27-210ENST00000533415 SPC25Q9HBM1 224 aa14.52□□□□□ -0.09
CDC27-210ENST00000533415 DDX20Q9UHI6 824 aaKnown RBP14.52□□□□□ -0.09
CDC27-210ENST00000533415 GTF2IRD1Q9UHL9 959 aa14.52□□□□□ -0.09
CDC27-210ENST00000533415 KCNG1Q9UIX4 513 aa14.52□□□□□ -0.09
CDC27-210ENST00000533415 A0A1B0GUA9 196 aa14.51□□□□□ -0.09
CDC27-210ENST00000533415 KIF5CO60282 957 aa14.51□□□□□ -0.09
CDC27-210ENST00000533415 FKTNO75072 461 aa14.51□□□□□ -0.09
CDC27-210ENST00000533415 N4BP1O75113 896 aaKnown RBP14.51□□□□□ -0.09
CDC27-210ENST00000533415 LDHAP00338 332 aaKnown RBP14.51□□□□□ -0.09
CDC27-210ENST00000533415 TMEM191BP0C7N4 346 aa14.51□□□□□ -0.09
CDC27-210ENST00000533415 THPOP40225 353 aa14.51□□□□□ -0.09
CDC27-210ENST00000533415 NOP14P78316 857 aaKnown RBP14.51□□□□□ -0.09
CDC27-210ENST00000533415 MAPK8IP2Q13387 824 aaPredicted RBP14.51□□□□□ -0.09
CDC27-210ENST00000533415 SLC18A3Q16572 532 aa14.51□□□□□ -0.09
CDC27-210ENST00000533415 SESTD1Q86VW0 696 aa14.51□□□□□ -0.09
CDC27-210ENST00000533415 SLC30A5Q8TAD4 765 aa14.51□□□□□ -0.09
CDC27-210ENST00000533415 GOLGA2P5Q9HBQ8 144 aa14.51□□□□□ -0.09
CDC27-210ENST00000533415 KIAA1586Q9HCI6 787 aa14.51□□□□□ -0.09
CDC27-210ENST00000533415 SIX4Q9UIU6 781 aa14.51□□□□□ -0.09
CDC27-210ENST00000533415 NAGPAQ9UK23 515 aa14.51□□□□□ -0.09
CDC27-210ENST00000533415 COQ4Q9Y3A0 265 aa14.51□□□□□ -0.09
CDC27-210ENST00000533415 CHRNA1P02708 482 aa14.51□□□□□ -0.09
CDC27-210ENST00000533415 ATP1A1P05023 1023 aaKnown RBP14.51□□□□□ -0.09
CDC27-210ENST00000533415 ITGB3P05106 788 aa14.51□□□□□ -0.09
CDC27-210ENST00000533415 CLDN10P78369 228 aa14.51□□□□□ -0.09
CDC27-210ENST00000533415 CCSAPQ6IQ19 270 aaPredicted RBP14.51□□□□□ -0.09
CDC27-210ENST00000533415 C1orf127Q8N9H9 656 aa14.51□□□□□ -0.09
CDC27-210ENST00000533415 EPC1Q9H2F5 836 aa14.51□□□□□ -0.09
CDC27-210ENST00000533415 AGO3Q9H9G7 860 aaKnown RBP14.51□□□□□ -0.09
CDC27-210ENST00000533415 C1orf112Q9NSG2 853 aa14.51□□□□□ -0.09
CDC27-210ENST00000533415 SMARCAL1Q9NZC9 954 aa14.51□□□□□ -0.09
CDC27-210ENST00000533415 Q9Y3F1 56 aa14.51□□□□□ -0.09
CDC27-210ENST00000533415 CHRNB2P17787 502 aa14.5□□□□□ -0.09
CDC27-210ENST00000533415 KRT83P78385 493 aa14.5□□□□□ -0.09
CDC27-210ENST00000533415 KIF5AQ12840 1032 aa14.5□□□□□ -0.09
CDC27-210ENST00000533415 PTGISQ16647 500 aa14.5□□□□□ -0.09
CDC27-210ENST00000533415 ALKBH5Q6P6C2 394 aaKnown RBP14.5□□□□□ -0.09
CDC27-210ENST00000533415 TMEM270Q6UE05 265 aa14.5□□□□□ -0.09
CDC27-210ENST00000533415 FAM228AQ86W67 206 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms