RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 PRSS55Q6UWB4 352 aaPredicted RBP18.83■□□□□ 0.6
PHRF1-204ENST00000532550 C15orf39Q6ZRI6 1047 aa18.83■□□□□ 0.6
PHRF1-204ENST00000532550 CCDC73Q6ZRK6 1079 aa18.83■□□□□ 0.6
PHRF1-204ENST00000532550 SPATA31D4Q6ZUB0 917 aa18.83■□□□□ 0.6
PHRF1-204ENST00000532550 SV2BQ7L1I2 683 aa18.83■□□□□ 0.6
PHRF1-204ENST00000532550 EDAQ92838 391 aa18.83■□□□□ 0.6
PHRF1-204ENST00000532550 KCNN1Q92952 543 aa18.83■□□□□ 0.6
PHRF1-204ENST00000532550 SNX27Q96L92 541 aa18.83■□□□□ 0.6
PHRF1-204ENST00000532550 PANK2Q9BZ23 570 aa18.83■□□□□ 0.6
PHRF1-204ENST00000532550 PLEKHA4Q9H4M7 779 aa18.83■□□□□ 0.6
PHRF1-204ENST00000532550 GOLGA2P5Q9HBQ8 144 aa18.83■□□□□ 0.6
PHRF1-204ENST00000532550 TFIP11Q9UBB9 837 aaKnown RBP18.83■□□□□ 0.6
PHRF1-204ENST00000532550 CCDC195A0A1B0GUA6 201 aa18.82■□□□□ 0.6
PHRF1-204ENST00000532550 HNRNPDLO14979 420 aaKnown RBP18.82■□□□□ 0.6
PHRF1-204ENST00000532550 TGM5O43548 720 aa18.82■□□□□ 0.6
PHRF1-204ENST00000532550 CLTAP09496 248 aa18.82■□□□□ 0.6
PHRF1-204ENST00000532550 NASPP49321 788 aaPredicted RBP18.82■□□□□ 0.6
PHRF1-204ENST00000532550 PSMD5Q16401 504 aa18.82■□□□□ 0.6
PHRF1-204ENST00000532550 KYAT1Q16773 422 aa18.82■□□□□ 0.6
PHRF1-204ENST00000532550 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.82■□□□□ 0.6
PHRF1-204ENST00000532550 DYMQ7RTS9 669 aa18.82■□□□□ 0.6
PHRF1-204ENST00000532550 CMASQ8NFW8 434 aaPredicted RBP18.82■□□□□ 0.6
PHRF1-204ENST00000532550 LNX1Q8TBB1 728 aaPredicted RBP18.82■□□□□ 0.6
PHRF1-204ENST00000532550 PIK3R5Q8WYR1 880 aa18.82■□□□□ 0.6
PHRF1-204ENST00000532550 ZMAT2Q96NC0 199 aaKnown RBP18.82■□□□□ 0.6
PHRF1-204ENST00000532550 CNTN3Q9P232 1028 aa18.82■□□□□ 0.6
PHRF1-204ENST00000532550 MTCL1Q9Y4B5 1905 aaKnown RBP18.82■□□□□ 0.6
PHRF1-204ENST00000532550 C2CD4DB7Z1M9 353 aa18.81■□□□□ 0.6
PHRF1-204ENST00000532550 NMT1P30419 496 aaKnown RBP18.81■□□□□ 0.6
PHRF1-204ENST00000532550 RPL9P32969 192 aaKnown RBP18.81■□□□□ 0.6
PHRF1-204ENST00000532550 GTF2BQ00403 316 aa18.81■□□□□ 0.6
PHRF1-204ENST00000532550 SOX4Q06945 474 aaPredicted RBP18.81■□□□□ 0.6
PHRF1-204ENST00000532550 SLC10A6Q3KNW5 377 aa18.81■□□□□ 0.6
PHRF1-204ENST00000532550 FOXD4L5Q5VV16 416 aaPredicted RBP18.81■□□□□ 0.6
PHRF1-204ENST00000532550 LILRA6Q6PI73 481 aa18.81■□□□□ 0.6
PHRF1-204ENST00000532550 CYP26C1Q6V0L0 522 aa18.81■□□□□ 0.6
PHRF1-204ENST00000532550 PLCD3Q8N3E9 789 aa18.81■□□□□ 0.6
PHRF1-204ENST00000532550 LINC00301Q8NCQ3 95 aa18.81■□□□□ 0.6
PHRF1-204ENST00000532550 FOXD4L4Q8WXT5 416 aaPredicted RBP18.81■□□□□ 0.6
PHRF1-204ENST00000532550 PLEKHA5Q9HAU0 1116 aa18.81■□□□□ 0.6
PHRF1-204ENST00000532550 USTQ9Y2C2 406 aa18.81■□□□□ 0.6
PHRF1-204ENST00000532550 PLXNA3P51805 1871 aa18.8■□□□□ 0.6
PHRF1-204ENST00000532550 PODXLO00592 558 aa18.8■□□□□ 0.6
PHRF1-204ENST00000532550 SPTLC2O15270 562 aa18.8■□□□□ 0.6
PHRF1-204ENST00000532550 FGFR3P22607 806 aa18.8■□□□□ 0.6
PHRF1-204ENST00000532550 IGFBP6P24592 240 aaPredicted RBP18.8■□□□□ 0.6
PHRF1-204ENST00000532550 STAT6P42226 847 aa18.8■□□□□ 0.6
PHRF1-204ENST00000532550 ZXDAP98168 799 aa18.8■□□□□ 0.6
PHRF1-204ENST00000532550 CCDC149Q6ZUS6 474 aa18.8■□□□□ 0.6
PHRF1-204ENST00000532550 TDRD5Q8NAT2 981 aaKnown RBP18.8■□□□□ 0.6
PHRF1-204ENST00000532550 SPRYD3Q8NCJ5 442 aa18.8■□□□□ 0.6
PHRF1-204ENST00000532550 KREMEN2Q8NCW0 462 aa18.8■□□□□ 0.6
PHRF1-204ENST00000532550 DDX12PQ92771 950 aa18.8■□□□□ 0.6
PHRF1-204ENST00000532550 ACSF2Q96CM8 615 aaPredicted RBP18.8■□□□□ 0.6
PHRF1-204ENST00000532550 CLSTN3Q9BQT9 956 aa18.8■□□□□ 0.6
PHRF1-204ENST00000532550 HAPLN2Q9GZV7 340 aa18.8■□□□□ 0.6
PHRF1-204ENST00000532550 PPP6R2O75170 966 aa18.79■□□□□ 0.6
PHRF1-204ENST00000532550 RFPL2O75678 378 aa18.79■□□□□ 0.6
PHRF1-204ENST00000532550 PIGRP01833 764 aa18.79■□□□□ 0.6
PHRF1-204ENST00000532550 BRCC3P46736 316 aa18.79■□□□□ 0.6
PHRF1-204ENST00000532550 CD300LGQ6UXG3 332 aa18.79■□□□□ 0.6
PHRF1-204ENST00000532550 OTOP3Q7RTS5 596 aa18.79■□□□□ 0.6
PHRF1-204ENST00000532550 C3orf58Q8NDZ4 430 aa18.79■□□□□ 0.6
PHRF1-204ENST00000532550 C18orf25Q96B23 403 aaPredicted RBP18.79■□□□□ 0.6
PHRF1-204ENST00000532550 FIZ1Q96SL8 496 aa18.79■□□□□ 0.6
PHRF1-204ENST00000532550 MSTO1Q9BUK6 570 aa18.79■□□□□ 0.6
PHRF1-204ENST00000532550 ST6GALNAC4Q9H4F1 302 aa18.79■□□□□ 0.6
PHRF1-204ENST00000532550 PIDD1Q9HB75 910 aa18.79■□□□□ 0.6
PHRF1-204ENST00000532550 RAPGEFL1Q9UHV5 662 aa18.79■□□□□ 0.6
PHRF1-204ENST00000532550 HCN4Q9Y3Q4 1203 aa18.79■□□□□ 0.6
PHRF1-204ENST00000532550 NUB1Q9Y5A7 615 aa18.79■□□□□ 0.6
PHRF1-204ENST00000532550 MYMKA6NI61 221 aa18.78■□□□□ 0.6
PHRF1-204ENST00000532550 OGTO15294 1046 aa18.78■□□□□ 0.6
PHRF1-204ENST00000532550 MEFVO15553 781 aaPredicted RBP18.78■□□□□ 0.6
PHRF1-204ENST00000532550 ZSCAN22P10073 491 aaPredicted RBP18.78■□□□□ 0.6
PHRF1-204ENST00000532550 CXCL8P10145 99 aa18.78■□□□□ 0.6
PHRF1-204ENST00000532550 GAP43P17677 238 aa18.78■□□□□ 0.6
PHRF1-204ENST00000532550 OR1D2P34982 312 aa18.78■□□□□ 0.6
PHRF1-204ENST00000532550 PPP2R3AQ06190 1150 aa18.78■□□□□ 0.6
PHRF1-204ENST00000532550 PTPN21Q16825 1174 aa18.78■□□□□ 0.6
PHRF1-204ENST00000532550 ZC2HC1CQ53FD0 456 aaPredicted RBP18.78■□□□□ 0.6
PHRF1-204ENST00000532550 TRIM67Q6ZTA4 783 aa18.78■□□□□ 0.6
PHRF1-204ENST00000532550 ANKS3Q6ZW76 656 aa18.78■□□□□ 0.6
PHRF1-204ENST00000532550 ZNF720Q7Z2F6 126 aa18.78■□□□□ 0.6
PHRF1-204ENST00000532550 MAP4K3Q8IVH8 894 aa18.78■□□□□ 0.6
PHRF1-204ENST00000532550 ZDHHC14Q8IZN3 488 aa18.78■□□□□ 0.6
PHRF1-204ENST00000532550 PDILTQ8N807 584 aa18.78■□□□□ 0.6
PHRF1-204ENST00000532550 FEZF2Q8TBJ5 459 aa18.78■□□□□ 0.6
PHRF1-204ENST00000532550 SMG7Q92540 1137 aaKnown RBP18.78■□□□□ 0.6
PHRF1-204ENST00000532550 RHOBTB2Q9BYZ6 727 aa18.78■□□□□ 0.6
PHRF1-204ENST00000532550 MRPL44Q9H9J2 332 aaKnown RBP18.78■□□□□ 0.6
PHRF1-204ENST00000532550 RPF1Q9H9Y2 349 aaKnown RBP18.78■□□□□ 0.6
PHRF1-204ENST00000532550 ZDHHC7Q9NXF8 308 aa18.78■□□□□ 0.6
PHRF1-204ENST00000532550 SEL1LQ9UBV2 794 aa18.78■□□□□ 0.6
PHRF1-204ENST00000532550 LIMD1Q9UGP4 676 aa18.78■□□□□ 0.6
PHRF1-204ENST00000532550 VWA8A3KMH1 1905 aa18.77■□□□□ 0.6
PHRF1-204ENST00000532550 TECTAO75443 2155 aa18.77■□□□□ 0.6
PHRF1-204ENST00000532550 A0A0B4J269 797 aa18.77■□□□□ 0.6
PHRF1-204ENST00000532550 TTC26A0AVF1 554 aa18.77■□□□□ 0.6
PHRF1-204ENST00000532550 I3L4J1 428 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms