RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 NPAS4Q8IUM7 802 aa13.61□□□□□ -0.23
COPB1-208ENST00000532088 CD302Q8IX05 232 aa13.61□□□□□ -0.23
COPB1-208ENST00000532088 CRIPAKQ8N1N5 446 aa13.61□□□□□ -0.23
COPB1-208ENST00000532088 CSGALNACT2Q8N6G5 542 aa13.61□□□□□ -0.23
COPB1-208ENST00000532088 SMG8Q8ND04 991 aaKnown RBP13.61□□□□□ -0.23
COPB1-208ENST00000532088 PRR7Q8TB68 274 aa13.61□□□□□ -0.23
COPB1-208ENST00000532088 FAM200AQ8TCP9 573 aa13.61□□□□□ -0.23
COPB1-208ENST00000532088 HERVK_113Q902F9 699 aa13.61□□□□□ -0.23
COPB1-208ENST00000532088 MED15Q96RN5 788 aa13.61□□□□□ -0.23
COPB1-208ENST00000532088 IKZF4Q9H2S9 585 aa13.61□□□□□ -0.23
COPB1-208ENST00000532088 THAP9Q9H5L6 903 aa13.61□□□□□ -0.23
COPB1-208ENST00000532088 GIT1Q9Y2X7 761 aa13.61□□□□□ -0.23
COPB1-208ENST00000532088 IPPQ9Y573 584 aa13.61□□□□□ -0.23
COPB1-208ENST00000532088 TET1Q8NFU7 2136 aa13.61□□□□□ -0.23
COPB1-208ENST00000532088 ZNF233A6NK53 670 aa13.6□□□□□ -0.23
COPB1-208ENST00000532088 CFAP99D6REC4 459 aa13.6□□□□□ -0.23
COPB1-208ENST00000532088 AMHP03971 560 aa13.6□□□□□ -0.23
COPB1-208ENST00000532088 STX17P56962 302 aa13.6□□□□□ -0.23
COPB1-208ENST00000532088 SURF1Q15526 300 aa13.6□□□□□ -0.23
COPB1-208ENST00000532088 XKR4Q5GH76 650 aa13.6□□□□□ -0.23
COPB1-208ENST00000532088 RASIP1Q5U651 963 aa13.6□□□□□ -0.23
COPB1-208ENST00000532088 CRELD2Q6UXH1 353 aaPredicted RBP13.6□□□□□ -0.23
COPB1-208ENST00000532088 ZNF365Q70YC5 407 aa13.6□□□□□ -0.23
COPB1-208ENST00000532088 ZBTB33Q86T24 672 aa13.6□□□□□ -0.23
COPB1-208ENST00000532088 USP37Q86T82 979 aa13.6□□□□□ -0.23
COPB1-208ENST00000532088 CDR2LQ86X02 465 aaPredicted RBP13.6□□□□□ -0.23
COPB1-208ENST00000532088 FAM114A1Q8IWE2 563 aa13.6□□□□□ -0.23
COPB1-208ENST00000532088 BRSK2Q8IWQ3 736 aa13.6□□□□□ -0.23
COPB1-208ENST00000532088 PHOSPHO2Q8TCD6 241 aa13.6□□□□□ -0.23
COPB1-208ENST00000532088 ACAP3Q96P50 834 aa13.6□□□□□ -0.23
COPB1-208ENST00000532088 PCIF1Q9H4Z3 704 aa13.6□□□□□ -0.23
COPB1-208ENST00000532088 METTL14Q9HCE5 456 aaKnown RBP13.6□□□□□ -0.23
COPB1-208ENST00000532088 TOPORSQ9NS56 1045 aaPredicted RBP13.6□□□□□ -0.23
COPB1-208ENST00000532088 IL18RAPO95256 599 aa13.59□□□□□ -0.23
COPB1-208ENST00000532088 ACRP10323 421 aa13.59□□□□□ -0.23
COPB1-208ENST00000532088 EPB41P11171 864 aaKnown RBP13.59□□□□□ -0.23
COPB1-208ENST00000532088 ITGA4P13612 1032 aa13.59□□□□□ -0.23
COPB1-208ENST00000532088 ATF7P17544 494 aaPredicted RBP13.59□□□□□ -0.23
COPB1-208ENST00000532088 MAGEA10P43363 369 aaPredicted RBP13.59□□□□□ -0.23
COPB1-208ENST00000532088 CYP2J2P51589 502 aa13.59□□□□□ -0.23
COPB1-208ENST00000532088 YARSP54577 528 aaKnown RBP13.59□□□□□ -0.23
COPB1-208ENST00000532088 WDR5P61964 334 aaKnown RBP13.59□□□□□ -0.23
COPB1-208ENST00000532088 NCAPHQ15003 741 aa13.59□□□□□ -0.23
COPB1-208ENST00000532088 IQCB1Q15051 598 aa13.59□□□□□ -0.23
COPB1-208ENST00000532088 SNRNP35Q16560 246 aaKnown RBP13.59□□□□□ -0.23
COPB1-208ENST00000532088 TPD52L1Q16890 204 aaPredicted RBP13.59□□□□□ -0.23
COPB1-208ENST00000532088 DESI1Q6ICB0 168 aa13.59□□□□□ -0.23
COPB1-208ENST00000532088 ALKAL1Q6UXT8 129 aa13.59□□□□□ -0.23
COPB1-208ENST00000532088 INTS8Q75QN2 995 aaKnown RBP13.59□□□□□ -0.23
COPB1-208ENST00000532088 FRMD5Q7Z6J6 570 aa13.59□□□□□ -0.23
COPB1-208ENST00000532088 NT5DC4Q86YG4 428 aa13.59□□□□□ -0.23
COPB1-208ENST00000532088 BORCS6Q96GS4 357 aa13.59□□□□□ -0.23
COPB1-208ENST00000532088 MFSD14AQ96MC6 490 aa13.59□□□□□ -0.23
COPB1-208ENST00000532088 GDF15Q99988 308 aa13.59□□□□□ -0.23
COPB1-208ENST00000532088 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.59□□□□□ -0.232e-6■■□□□ 12.9
COPB1-208ENST00000532088 FAM213AQ9BRX8 229 aa13.59□□□□□ -0.23
COPB1-208ENST00000532088 SRRTQ9BXP5 876 aaKnown RBP13.59□□□□□ -0.23
COPB1-208ENST00000532088 NXF3Q9H4D5 531 aaKnown RBP13.59□□□□□ -0.23
COPB1-208ENST00000532088 ASB7Q9H672 318 aa13.59□□□□□ -0.23
COPB1-208ENST00000532088 RPF1Q9H9Y2 349 aaKnown RBP13.59□□□□□ -0.23
COPB1-208ENST00000532088 DERAQ9Y315 318 aa13.59□□□□□ -0.23
COPB1-208ENST00000532088 NFE2L3Q9Y4A8 694 aa13.59□□□□□ -0.23
COPB1-208ENST00000532088 TTC3P53804 2025 aa13.59□□□□□ -0.23
COPB1-208ENST00000532088 TTC26A0AVF1 554 aa13.58□□□□□ -0.24
COPB1-208ENST00000532088 AKAP3O75969 853 aa13.58□□□□□ -0.24
COPB1-208ENST00000532088 RECQL4O94761 1208 aa13.58□□□□□ -0.24
COPB1-208ENST00000532088 HARSP12081 509 aaKnown RBP13.58□□□□□ -0.24
COPB1-208ENST00000532088 BMP8BP34820 402 aa13.58□□□□□ -0.24
COPB1-208ENST00000532088 KCNJ6P48051 423 aa13.58□□□□□ -0.24
COPB1-208ENST00000532088 ACOT2P49753 483 aa13.58□□□□□ -0.24
COPB1-208ENST00000532088 EPHB4P54760 987 aa13.58□□□□□ -0.24
COPB1-208ENST00000532088 SPAG1Q07617 926 aa13.58□□□□□ -0.24
COPB1-208ENST00000532088 CYP24A1Q07973 514 aa13.58□□□□□ -0.24
COPB1-208ENST00000532088 PSMD6Q15008 389 aa13.58□□□□□ -0.24
COPB1-208ENST00000532088 ENOX2Q16206 610 aaKnown RBP13.58□□□□□ -0.24
COPB1-208ENST00000532088 CEP135Q66GS9 1140 aa13.58□□□□□ -0.24
COPB1-208ENST00000532088 AGMOQ6ZNB7 445 aa13.58□□□□□ -0.24
COPB1-208ENST00000532088 DHX40Q8IX18 779 aaKnown RBP13.58□□□□□ -0.24
COPB1-208ENST00000532088 FAM186BQ8IYM0 893 aa13.58□□□□□ -0.24
COPB1-208ENST00000532088 THNSL1Q8IYQ7 743 aa13.58□□□□□ -0.24
COPB1-208ENST00000532088 CEP120Q8N960 986 aa13.58□□□□□ -0.24
COPB1-208ENST00000532088 TOP1MTQ969P6 601 aa13.58□□□□□ -0.24
COPB1-208ENST00000532088 SAAL1Q96ER3 474 aa13.58□□□□□ -0.24
COPB1-208ENST00000532088 SNX27Q96L92 541 aa13.58□□□□□ -0.24
COPB1-208ENST00000532088 SLC9A7Q96T83 725 aa13.58□□□□□ -0.24
COPB1-208ENST00000532088 RSAD1Q9HA92 442 aa13.58□□□□□ -0.24
COPB1-208ENST00000532088 CBX8Q9HC52 389 aa13.58□□□□□ -0.24
COPB1-208ENST00000532088 SNTG2Q9NY99 539 aa13.58□□□□□ -0.24
COPB1-208ENST00000532088 RBAKQ9NYW8 714 aaPredicted RBP13.58□□□□□ -0.24
COPB1-208ENST00000532088 CNTN3Q9P232 1028 aa13.58□□□□□ -0.24
COPB1-208ENST00000532088 PCDHB7Q9Y5E2 793 aa13.58□□□□□ -0.24
COPB1-208ENST00000532088 RALGAPA2Q2PPJ7 1873 aa13.58□□□□□ -0.24
COPB1-208ENST00000532088 BECN2A8MW95 431 aa13.57□□□□□ -0.24
COPB1-208ENST00000532088 KCNE1P15382 129 aa13.57□□□□□ -0.24
COPB1-208ENST00000532088 EEF1GP26641 437 aaKnown RBP13.57□□□□□ -0.24
COPB1-208ENST00000532088 TNFSF9P41273 254 aa13.57□□□□□ -0.24
COPB1-208ENST00000532088 CASP4P49662 377 aa13.57□□□□□ -0.24
COPB1-208ENST00000532088 AP3M2P53677 418 aa13.57□□□□□ -0.24
COPB1-208ENST00000532088 TPM4P67936 248 aa13.57□□□□□ -0.24
COPB1-208ENST00000532088 CLDN10P78369 228 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms