RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 RTKN2Q8IZC4 609 aa3.67□□□□□ -1.82
CD44-234ENST00000531873 NKAPQ8N5F7 415 aaKnown RBP3.67□□□□□ -1.82
CD44-234ENST00000531873 PLA2G15Q8NCC3 412 aa3.67□□□□□ -1.82
CD44-234ENST00000531873 ACRBPQ8NEB7 543 aa3.67□□□□□ -1.82
CD44-234ENST00000531873 MYRIPQ8NFW9 859 aa3.67□□□□□ -1.82
CD44-234ENST00000531873 FNIP1Q8TF40 1166 aa3.67□□□□□ -1.82
CD44-234ENST00000531873 ATXN2LQ8WWM7 1075 aaKnown RBP3.67□□□□□ -1.82
CD44-234ENST00000531873 CASKIN2Q8WXE0 1202 aa3.67□□□□□ -1.82
CD44-234ENST00000531873 MAML1Q92585 1016 aa3.67□□□□□ -1.82
CD44-234ENST00000531873 GFM2Q969S9 779 aaKnown RBP3.67□□□□□ -1.82
CD44-234ENST00000531873 CYFIP2Q96F07 1278 aa3.67□□□□□ -1.82
CD44-234ENST00000531873 ZC3H10Q96K80 434 aaKnown RBP3.67□□□□□ -1.82
CD44-234ENST00000531873 MSLNLQ96KJ4 702 aa3.67□□□□□ -1.82
CD44-234ENST00000531873 YTHDC1Q96MU7 727 aaKnown RBP3.67□□□□□ -1.82
CD44-234ENST00000531873 UHRF1Q96T88 793 aaPredicted RBP3.67□□□□□ -1.82
CD44-234ENST00000531873 SPATA25Q9BR10 227 aa3.67□□□□□ -1.82
CD44-234ENST00000531873 C1orf43Q9BWL3 253 aa3.67□□□□□ -1.82
CD44-234ENST00000531873 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.67□□□□□ -1.82
CD44-234ENST00000531873 MRPL46Q9H2W6 279 aaKnown RBP3.67□□□□□ -1.82
CD44-234ENST00000531873 TMPRSS5Q9H3S3 457 aa3.67□□□□□ -1.82
CD44-234ENST00000531873 WDCPQ9H6R7 721 aa3.67□□□□□ -1.82
CD44-234ENST00000531873 CERS4Q9HA82 394 aa3.67□□□□□ -1.82
CD44-234ENST00000531873 STARD7Q9NQZ5 370 aa3.67□□□□□ -1.82
CD44-234ENST00000531873 LUZP4Q9P127 313 aa3.67□□□□□ -1.82
CD44-234ENST00000531873 CDC23Q9UJX2 597 aa3.67□□□□□ -1.82
CD44-234ENST00000531873 SNX13Q9Y5W8 968 aa3.67□□□□□ -1.82
CD44-234ENST00000531873 ACTL7AQ9Y615 435 aa3.67□□□□□ -1.82
CD44-234ENST00000531873 MORC2Q9Y6X9 1032 aaPredicted RBP3.67□□□□□ -1.82
CD44-234ENST00000531873 PMF1-BGLAPU3KQ54 211 aa3.67□□□□□ -1.82
CD44-234ENST00000531873 POM121BA6NF01 834 aa3.66□□□□□ -1.82
CD44-234ENST00000531873 ISM1B1AKI9 464 aa3.66□□□□□ -1.82
CD44-234ENST00000531873 MTSS1O43312 755 aa3.66□□□□□ -1.82
CD44-234ENST00000531873 CYP7B1O75881 506 aa3.66□□□□□ -1.82
CD44-234ENST00000531873 TOX4O94842 621 aa3.66□□□□□ -1.82
CD44-234ENST00000531873 MATN4O95460 622 aa3.66□□□□□ -1.82
CD44-234ENST00000531873 AHSGP02765 367 aa3.66□□□□□ -1.82
CD44-234ENST00000531873 CD1AP06126 327 aa3.66□□□□□ -1.82
CD44-234ENST00000531873 SBK3P0C264 359 aa3.66□□□□□ -1.82
CD44-234ENST00000531873 FTH1P19P0C7X4 201 aa3.66□□□□□ -1.82
CD44-234ENST00000531873 BRAFP15056 766 aa3.66□□□□□ -1.82
CD44-234ENST00000531873 ALOX15P16050 662 aaPredicted RBP3.66□□□□□ -1.82
CD44-234ENST00000531873 BMP7P18075 431 aa3.66□□□□□ -1.82
CD44-234ENST00000531873 RPL17P18621 184 aaKnown RBP3.66□□□□□ -1.82
CD44-234ENST00000531873 EN2P19622 333 aaPredicted RBP3.66□□□□□ -1.82
CD44-234ENST00000531873 RPL13P26373 211 aaKnown RBP3.66□□□□□ -1.82
CD44-234ENST00000531873 CSF2RBP32927 897 aa3.66□□□□□ -1.82
CD44-234ENST00000531873 ALDH1A3P47895 512 aa3.66□□□□□ -1.82
CD44-234ENST00000531873 FLT3LGP49771 235 aa3.66□□□□□ -1.82
CD44-234ENST00000531873 ARFIP2P53365 341 aa3.66□□□□□ -1.82
CD44-234ENST00000531873 RRADP55042 308 aa3.66□□□□□ -1.82
CD44-234ENST00000531873 PER3P56645 1201 aa3.66□□□□□ -1.82
CD44-234ENST00000531873 SESN2P58004 480 aaPredicted RBP3.66□□□□□ -1.82
CD44-234ENST00000531873 CTXN1P60606 82 aa3.66□□□□□ -1.82
CD44-234ENST00000531873 HTRA4P83105 476 aaPredicted RBP3.66□□□□□ -1.82
CD44-234ENST00000531873 FMO1Q01740 532 aa3.66□□□□□ -1.82
CD44-234ENST00000531873 BTKQ06187 659 aa3.66□□□□□ -1.82
CD44-234ENST00000531873 PMS2P11Q13670 270 aa3.66□□□□□ -1.82
CD44-234ENST00000531873 DAG1Q14118 895 aa3.66□□□□□ -1.82
CD44-234ENST00000531873 CNGA2Q16280 664 aa3.66□□□□□ -1.82
CD44-234ENST00000531873 TBR1Q16650 682 aa3.66□□□□□ -1.82
CD44-234ENST00000531873 FLYWCH1Q4VC44 716 aa3.66□□□□□ -1.82
CD44-234ENST00000531873 VWA3BQ502W6 1294 aa3.66□□□□□ -1.82
CD44-234ENST00000531873 FAM209BQ5JX69 171 aa3.66□□□□□ -1.82
CD44-234ENST00000531873 AGBL4Q5VU57 503 aa3.66□□□□□ -1.82
CD44-234ENST00000531873 HIBCHQ6NVY1 386 aaPredicted RBP3.66□□□□□ -1.82
CD44-234ENST00000531873 TMED8Q6PL24 325 aaPredicted RBP3.66□□□□□ -1.82
CD44-234ENST00000531873 GADL1Q6ZQY3 521 aa3.66□□□□□ -1.82
CD44-234ENST00000531873 Q6ZUG5 572 aa3.66□□□□□ -1.82
CD44-234ENST00000531873 ZNF572Q7Z3I7 529 aaPredicted RBP3.66□□□□□ -1.82
CD44-234ENST00000531873 PRRT2Q7Z6L0 340 aaPredicted RBP3.66□□□□□ -1.82
CD44-234ENST00000531873 PLXDC1Q8IUK5 500 aa3.66□□□□□ -1.82
CD44-234ENST00000531873 REXO1L1PQ8IX06 675 aa3.66□□□□□ -1.82
CD44-234ENST00000531873 ANKRD42Q8N9B4 389 aa3.66□□□□□ -1.82
CD44-234ENST00000531873 PPM1EQ8WY54 764 aa3.66□□□□□ -1.82
CD44-234ENST00000531873 KCNN1Q92952 543 aa3.66□□□□□ -1.82
CD44-234ENST00000531873 SLC7A6OSQ96CW6 309 aaPredicted RBP3.66□□□□□ -1.82
CD44-234ENST00000531873 AJUBAQ96IF1 538 aa3.66□□□□□ -1.82
CD44-234ENST00000531873 HERPUD2Q9BSE4 406 aa3.66□□□□□ -1.82
CD44-234ENST00000531873 SELENOOQ9BVL4 669 aa3.66□□□□□ -1.82
CD44-234ENST00000531873 TRIM54Q9BYV2 358 aa3.66□□□□□ -1.82
CD44-234ENST00000531873 DPH1Q9BZG8 443 aa3.66□□□□□ -1.82
CD44-234ENST00000531873 UNKQ9C0B0 810 aaKnown RBP3.66□□□□□ -1.82
CD44-234ENST00000531873 SENP6Q9GZR1 1112 aaPredicted RBP3.66□□□□□ -1.82
CD44-234ENST00000531873 ENKD1Q9H0I2 346 aa3.66□□□□□ -1.82
CD44-234ENST00000531873 KCNH6Q9H252 994 aa3.66□□□□□ -1.82
CD44-234ENST00000531873 VPS11Q9H270 941 aa3.66□□□□□ -1.82
CD44-234ENST00000531873 KIAA1586Q9HCI6 787 aa3.66□□□□□ -1.82
CD44-234ENST00000531873 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.66□□□□□ -1.82
CD44-234ENST00000531873 COL20A1Q9P218 1284 aa3.66□□□□□ -1.82
CD44-234ENST00000531873 CPNE7Q9UBL6 633 aa3.66□□□□□ -1.82
CD44-234ENST00000531873 CPA4Q9UI42 421 aa3.66□□□□□ -1.82
CD44-234ENST00000531873 PADI4Q9UM07 663 aa3.66□□□□□ -1.82
CD44-234ENST00000531873 PCDHA6Q9UN73 950 aa3.66□□□□□ -1.82
CD44-234ENST00000531873 PCDHGB2Q9Y5G2 931 aa3.66□□□□□ -1.82
CD44-234ENST00000531873 PCDHA1Q9Y5I3 950 aa3.66□□□□□ -1.82
CD44-234ENST00000531873 RBM8AQ9Y5S9 174 aaKnown RBP3.66□□□□□ -1.82
CD44-234ENST00000531873 A0A087WV62 115 aa3.65□□□□□ -1.83
CD44-234ENST00000531873 A0A1W2PPC4 97 aa3.65□□□□□ -1.83
CD44-234ENST00000531873 PRSS29PA6NIE9 313 aa3.65□□□□□ -1.83
CD44-234ENST00000531873 FOXN3O00409 490 aaPredicted RBP3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms