RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 ALKAL1Q6UXT8 129 aa20.61■□□□□ 0.89
SMPD1-205ENST00000531303 OTOP2Q7RTS6 562 aa20.61■□□□□ 0.89
SMPD1-205ENST00000531303 ZNF598Q86UK7 904 aaKnown RBP20.61■□□□□ 0.89
SMPD1-205ENST00000531303 WDR49Q8IV35 697 aa20.61■□□□□ 0.89
SMPD1-205ENST00000531303 CD302Q8IX05 232 aa20.61■□□□□ 0.89
SMPD1-205ENST00000531303 PCMTD1Q96MG8 357 aaPredicted RBP20.61■□□□□ 0.89
SMPD1-205ENST00000531303 ZMAT2Q96NC0 199 aaKnown RBP20.61■□□□□ 0.89
SMPD1-205ENST00000531303 LBHD1Q9BQE6 289 aaPredicted RBP20.61■□□□□ 0.89
SMPD1-205ENST00000531303 MTMR12Q9C0I1 747 aa20.61■□□□□ 0.89
SMPD1-205ENST00000531303 RSAD1Q9HA92 442 aa20.61■□□□□ 0.89
SMPD1-205ENST00000531303 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.61■□□□□ 0.89
SMPD1-205ENST00000531303 GIT1Q9Y2X7 761 aa20.61■□□□□ 0.89
SMPD1-205ENST00000531303 PDCD11Q14690 1871 aaKnown RBP20.6■□□□□ 0.89
SMPD1-205ENST00000531303 PHACTR2O75167 634 aa20.6■□□□□ 0.89
SMPD1-205ENST00000531303 UPP2O95045 317 aa20.6■□□□□ 0.89
SMPD1-205ENST00000531303 EOMESO95936 686 aa20.6■□□□□ 0.89
SMPD1-205ENST00000531303 TNNC2P02585 160 aa20.6■□□□□ 0.89
SMPD1-205ENST00000531303 FGFR1P11362 822 aa20.6■□□□□ 0.89
SMPD1-205ENST00000531303 MXI1P50539 228 aa20.6■□□□□ 0.89
SMPD1-205ENST00000531303 GUCY2FP51841 1108 aa20.6■□□□□ 0.89
SMPD1-205ENST00000531303 CLDN10P78369 228 aa20.6■□□□□ 0.89
SMPD1-205ENST00000531303 SV2AQ7L0J3 742 aa20.6■□□□□ 0.89
SMPD1-205ENST00000531303 C16orf59Q7L2K0 433 aa20.6■□□□□ 0.89
SMPD1-205ENST00000531303 RPS6KC1Q96S38 1066 aa20.6■□□□□ 0.89
SMPD1-205ENST00000531303 TMEM8AQ9HCN3 771 aa20.6■□□□□ 0.89
SMPD1-205ENST00000531303 CNTN3Q9P232 1028 aa20.6■□□□□ 0.89
SMPD1-205ENST00000531303 SMIM28A0A1B0GU29 152 aa20.59■□□□□ 0.89
SMPD1-205ENST00000531303 ARL5CA6NH57 179 aa20.59■□□□□ 0.89
SMPD1-205ENST00000531303 PFKMP08237 780 aa20.59■□□□□ 0.89
SMPD1-205ENST00000531303 ACTN1P12814 892 aa20.59■□□□□ 0.89
SMPD1-205ENST00000531303 GTF2H1P32780 548 aa20.59■□□□□ 0.89
SMPD1-205ENST00000531303 KLK7P49862 253 aa20.59■□□□□ 0.89
SMPD1-205ENST00000531303 EPHB4P54760 987 aa20.59■□□□□ 0.89
SMPD1-205ENST00000531303 MCCD1P59942 119 aaPredicted RBP20.59■□□□□ 0.89
SMPD1-205ENST00000531303 ENPEPQ07075 957 aa20.59■□□□□ 0.89
SMPD1-205ENST00000531303 SYCP1Q15431 976 aa20.59■□□□□ 0.89
SMPD1-205ENST00000531303 KRT39Q6A163 491 aa20.59■□□□□ 0.89
SMPD1-205ENST00000531303 ZNF365Q70YC5 407 aa20.59■□□□□ 0.89
SMPD1-205ENST00000531303 HELQQ8TDG4 1101 aa20.59■□□□□ 0.89
SMPD1-205ENST00000531303 CACTINQ8WUQ7 758 aaKnown RBP20.59■□□□□ 0.89
SMPD1-205ENST00000531303 ANP32BQ92688 251 aaKnown RBP20.59■□□□□ 0.89
SMPD1-205ENST00000531303 C18orf25Q96B23 403 aaPredicted RBP20.59■□□□□ 0.89
SMPD1-205ENST00000531303 ANKRD36BP1Q96IX9 119 aa20.59■□□□□ 0.89
SMPD1-205ENST00000531303 TMEM161AQ9NX61 479 aa20.59■□□□□ 0.89
SMPD1-205ENST00000531303 MIOSQ9NXC5 875 aa20.59■□□□□ 0.89
SMPD1-205ENST00000531303 ABHD14A-ACY1A0A1B0GW23 586 aa20.58■□□□□ 0.89
SMPD1-205ENST00000531303 N4BP1O75113 896 aaKnown RBP20.58■□□□□ 0.89
SMPD1-205ENST00000531303 CLSTN1O94985 981 aa20.58■□□□□ 0.89
SMPD1-205ENST00000531303 C4BPAP04003 597 aaKnown RBP20.58■□□□□ 0.89
SMPD1-205ENST00000531303 SCNN1GP51170 649 aa20.58■□□□□ 0.89
SMPD1-205ENST00000531303 TDRD10Q5VZ19 366 aaKnown RBP20.58■□□□□ 0.89
SMPD1-205ENST00000531303 SCARA3Q6AZY7 606 aa20.58■□□□□ 0.89
SMPD1-205ENST00000531303 GLB1LQ6UWU2 654 aa20.58■□□□□ 0.89
SMPD1-205ENST00000531303 DRC7Q8IY82 874 aa20.58■□□□□ 0.89
SMPD1-205ENST00000531303 UBN1Q9NPG3 1134 aa20.58■□□□□ 0.89
SMPD1-205ENST00000531303 PLAGL2Q9UPG8 496 aa20.58■□□□□ 0.89
SMPD1-205ENST00000531303 TDRD15B5MCY1 1934 aaKnown RBP20.58■□□□□ 0.88
SMPD1-205ENST00000531303 ZBBXA8MT70 800 aa20.57■□□□□ 0.88
SMPD1-205ENST00000531303 PTGESO14684 152 aa20.57■□□□□ 0.88
SMPD1-205ENST00000531303 LRRN2O75325 713 aa20.57■□□□□ 0.88
SMPD1-205ENST00000531303 OFD1O75665 1012 aa20.57■□□□□ 0.88
SMPD1-205ENST00000531303 POMCP01189 267 aa20.57■□□□□ 0.88
SMPD1-205ENST00000531303 FGBP02675 491 aa20.57■□□□□ 0.88
SMPD1-205ENST00000531303 KRT19P08727 400 aa20.57■□□□□ 0.88
SMPD1-205ENST00000531303 KCNE1P15382 129 aa20.57■□□□□ 0.88
SMPD1-205ENST00000531303 GATMP50440 423 aa20.57■□□□□ 0.88
SMPD1-205ENST00000531303 CETN1Q12798 172 aa20.57■□□□□ 0.88
SMPD1-205ENST00000531303 XKR4Q5GH76 650 aa20.57■□□□□ 0.88
SMPD1-205ENST00000531303 CLLU1OSQ5K130 101 aa20.57■□□□□ 0.88
SMPD1-205ENST00000531303 FAM117BQ6P1L5 589 aa20.57■□□□□ 0.88
SMPD1-205ENST00000531303 GBP6Q6ZN66 633 aa20.57■□□□□ 0.88
SMPD1-205ENST00000531303 FAM43BQ6ZT52 329 aaPredicted RBP20.57■□□□□ 0.88
SMPD1-205ENST00000531303 TRAPPC11Q7Z392 1133 aa20.57■□□□□ 0.88
SMPD1-205ENST00000531303 TAS1R2Q8TE23 839 aa20.57■□□□□ 0.88
SMPD1-205ENST00000531303 ELMO3Q96BJ8 720 aa20.57■□□□□ 0.88
SMPD1-205ENST00000531303 GCNT4Q9P109 453 aa20.57■□□□□ 0.88
SMPD1-205ENST00000531303 TUBGCP4Q9UGJ1 667 aa20.57■□□□□ 0.88
SMPD1-205ENST00000531303 C2CD2Q9Y426 696 aa20.57■□□□□ 0.88
SMPD1-205ENST00000531303 NR2E3Q9Y5X4 410 aa20.57■□□□□ 0.88
SMPD1-205ENST00000531303 SLC9A1P19634 815 aa20.56■□□□□ 0.88
SMPD1-205ENST00000531303 PIK3CAP42336 1068 aa20.56■□□□□ 0.88
SMPD1-205ENST00000531303 AP3M2P53677 418 aa20.56■□□□□ 0.88
SMPD1-205ENST00000531303 DEFB103AP81534 67 aa20.56■□□□□ 0.88
SMPD1-205ENST00000531303 APBA1Q02410 837 aa20.56■□□□□ 0.88
SMPD1-205ENST00000531303 KCNMA1Q12791 1236 aa20.56■□□□□ 0.88
SMPD1-205ENST00000531303 EXOC3L4Q17RC7 722 aa20.56■□□□□ 0.88
SMPD1-205ENST00000531303 ZACNQ401N2 412 aa20.56■□□□□ 0.88
SMPD1-205ENST00000531303 C15orf39Q6ZRI6 1047 aa20.56■□□□□ 0.88
SMPD1-205ENST00000531303 TMCO2Q7Z6W1 182 aaPredicted RBP20.56■□□□□ 0.88
SMPD1-205ENST00000531303 NPAS4Q8IUM7 802 aa20.56■□□□□ 0.88
SMPD1-205ENST00000531303 ABI1Q8IZP0 508 aa20.56■□□□□ 0.88
SMPD1-205ENST00000531303 GSTCDQ8NEC7 633 aa20.56■□□□□ 0.88
SMPD1-205ENST00000531303 SEMA4DQ92854 862 aa20.56■□□□□ 0.88
SMPD1-205ENST00000531303 MRFAP1L1Q96HT8 127 aa20.56■□□□□ 0.88
SMPD1-205ENST00000531303 LSM14BQ9BX40 385 aaKnown RBP20.56■□□□□ 0.88
SMPD1-205ENST00000531303 ELAC1Q9H777 363 aaKnown RBP20.56■□□□□ 0.88
SMPD1-205ENST00000531303 DPP3Q9NY33 737 aa20.56■□□□□ 0.88
SMPD1-205ENST00000531303 DERAQ9Y315 318 aa20.56■□□□□ 0.88
SMPD1-205ENST00000531303 CEP290O15078 2479 aa20.56■□□□□ 0.88
SMPD1-205ENST00000531303 VNN1O95497 513 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms