RNA–Protein interactions for RNA: ENST00000531089.5

CTSB-220, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTSB, Length 1,436 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-220ENST00000531089 ALKAL1Q6UXT8 129 aa17.01■□□□□ 0.31
CTSB-220ENST00000531089 TAS1R3Q7RTX0 852 aa17.01■□□□□ 0.31
CTSB-220ENST00000531089 LINC00301Q8NCQ3 95 aa17.01■□□□□ 0.31
CTSB-220ENST00000531089 HASPINQ8TF76 798 aa17.01■□□□□ 0.31
CTSB-220ENST00000531089 RAD54LQ92698 747 aa17.01■□□□□ 0.31
CTSB-220ENST00000531089 ACO2Q99798 780 aaKnown RBP17.01■□□□□ 0.31
CTSB-220ENST00000531089 BLOC1S4Q9NUP1 217 aa17.01■□□□□ 0.31
CTSB-220ENST00000531089 SPTLC2O15270 562 aa17■□□□□ 0.31
CTSB-220ENST00000531089 PPP6R2O75170 966 aa17■□□□□ 0.31
CTSB-220ENST00000531089 KIF4AO95239 1232 aa17■□□□□ 0.31
CTSB-220ENST00000531089 PLS3P13797 630 aa17■□□□□ 0.31
CTSB-220ENST00000531089 MCM6Q14566 821 aa17■□□□□ 0.31
CTSB-220ENST00000531089 DCAF4L1Q3SXM0 396 aa17■□□□□ 0.31
CTSB-220ENST00000531089 RRAGBQ5VZM2 374 aa17■□□□□ 0.31
CTSB-220ENST00000531089 USP49Q70CQ1 688 aa17■□□□□ 0.31
CTSB-220ENST00000531089 GPBP1Q86WP2 473 aa17■□□□□ 0.31
CTSB-220ENST00000531089 SMG7Q92540 1137 aaKnown RBP17■□□□□ 0.31
CTSB-220ENST00000531089 PPP1R10Q96QC0 940 aaKnown RBP17■□□□□ 0.31
CTSB-220ENST00000531089 TTPALQ9BTX7 342 aa17■□□□□ 0.31
CTSB-220ENST00000531089 PRKD2Q9BZL6 878 aa17■□□□□ 0.31
CTSB-220ENST00000531089 LARSQ9P2J5 1176 aaKnown RBP17■□□□□ 0.31
CTSB-220ENST00000531089 CITO14578 2027 aa17■□□□□ 0.31
CTSB-220ENST00000531089 SF3B1O75533 1304 aaKnown RBP eCLIP17■□□□□ 0.311e-6■■■■■ 91.3
CTSB-220ENST00000531089 NPHP3-ACAD11A0A0J9YXS1 232 aa16.99■□□□□ 0.31
CTSB-220ENST00000531089 KRT18P05783 430 aaKnown RBP16.99■□□□□ 0.31
CTSB-220ENST00000531089 TDGQ13569 410 aa16.99■□□□□ 0.31
CTSB-220ENST00000531089 BECN1Q14457 450 aa16.99■□□□□ 0.31
CTSB-220ENST00000531089 FOXD4L6Q3SYB3 417 aaPredicted RBP16.99■□□□□ 0.31
CTSB-220ENST00000531089 XKR4Q5GH76 650 aa16.99■□□□□ 0.31
CTSB-220ENST00000531089 ATL3Q6DD88 541 aa16.99■□□□□ 0.31
CTSB-220ENST00000531089 FOXD4L3Q6VB84 417 aaPredicted RBP16.99■□□□□ 0.31
CTSB-220ENST00000531089 APBB1IPQ7Z5R6 666 aaPredicted RBP16.99■□□□□ 0.31
CTSB-220ENST00000531089 CEP57Q86XR8 500 aa16.99■□□□□ 0.31
CTSB-220ENST00000531089 SPIRE2Q8WWL2 714 aa16.99■□□□□ 0.31
CTSB-220ENST00000531089 PIK3R5Q8WYR1 880 aa16.99■□□□□ 0.31
CTSB-220ENST00000531089 LARP4BQ92615 738 aaKnown RBP16.99■□□□□ 0.31
CTSB-220ENST00000531089 ARHGAP28Q9P2N2 729 aa16.99■□□□□ 0.31
CTSB-220ENST00000531089 ODF2LQ9ULJ1 636 aa16.99■□□□□ 0.31
CTSB-220ENST00000531089 NOTCH4Q99466 2003 aa16.99■□□□□ 0.31
CTSB-220ENST00000531089 SMIM28A0A1B0GU29 152 aa16.98■□□□□ 0.31
CTSB-220ENST00000531089 SLC16A4O15374 487 aa16.98■□□□□ 0.31
CTSB-220ENST00000531089 ADAM12O43184 909 aa16.98■□□□□ 0.31
CTSB-220ENST00000531089 ZMYND10O75800 440 aa16.98■□□□□ 0.31
CTSB-220ENST00000531089 YEATS4O95619 227 aa16.98■□□□□ 0.31
CTSB-220ENST00000531089 PTPN5P54829 565 aa16.98■□□□□ 0.31
CTSB-220ENST00000531089 ELMSAN1Q6PJG2 1045 aa16.98■□□□□ 0.31
CTSB-220ENST00000531089 DCLRE1AQ6PJP8 1040 aa16.98■□□□□ 0.31
CTSB-220ENST00000531089 CCDC73Q6ZRK6 1079 aa16.98■□□□□ 0.31
CTSB-220ENST00000531089 CEP120Q8N960 986 aa16.98■□□□□ 0.31
CTSB-220ENST00000531089 MYADMQ96S97 322 aa16.98■□□□□ 0.31
CTSB-220ENST00000531089 TARS2Q9BW92 718 aaKnown RBP16.98■□□□□ 0.31
CTSB-220ENST00000531089 ZDHHC7Q9NXF8 308 aa16.98■□□□□ 0.31
CTSB-220ENST00000531089 STK17AQ9UEE5 414 aa16.98■□□□□ 0.31
CTSB-220ENST00000531089 CFAP45Q9UL16 551 aa16.98■□□□□ 0.31
CTSB-220ENST00000531089 MYO15AQ9UKN7 3530 aa16.98■□□□□ 0.31
CTSB-220ENST00000531089 VPS13AQ96RL7 3174 aa16.97■□□□□ 0.31
CTSB-220ENST00000531089 H0YCG3 227 aa16.97■□□□□ 0.31
CTSB-220ENST00000531089 ABLIM1O14639 778 aa16.97■□□□□ 0.31
CTSB-220ENST00000531089 FAM13AO94988 1023 aa16.97■□□□□ 0.31
CTSB-220ENST00000531089 GRM5P41594 1212 aa16.97■□□□□ 0.31
CTSB-220ENST00000531089 CLCNKBP51801 687 aa16.97■□□□□ 0.31
CTSB-220ENST00000531089 CACNB1Q02641 598 aaPredicted RBP16.97■□□□□ 0.31
CTSB-220ENST00000531089 CREMQ03060 361 aa16.97■□□□□ 0.31
CTSB-220ENST00000531089 STRN3Q13033 797 aa16.97■□□□□ 0.31
CTSB-220ENST00000531089 PKP1Q13835 747 aa16.97■□□□□ 0.31
CTSB-220ENST00000531089 PSMD5Q16401 504 aa16.97■□□□□ 0.31
CTSB-220ENST00000531089 UPP1Q16831 310 aa16.97■□□□□ 0.31
CTSB-220ENST00000531089 GLRA4Q5JXX5 417 aa16.97■□□□□ 0.31
CTSB-220ENST00000531089 MYCT1Q8N699 235 aa16.97■□□□□ 0.31
CTSB-220ENST00000531089 TMEM105Q8N8V8 129 aa16.97■□□□□ 0.31
CTSB-220ENST00000531089 LRRC15Q8TF66 581 aa16.97■□□□□ 0.31
CTSB-220ENST00000531089 RSAD2Q8WXG1 361 aa16.97■□□□□ 0.31
CTSB-220ENST00000531089 ZBTB45Q96K62 511 aaPredicted RBP16.97■□□□□ 0.31
CTSB-220ENST00000531089 REEP2Q9BRK0 252 aa16.97■□□□□ 0.31
CTSB-220ENST00000531089 MRPL4Q9BYD3 311 aaKnown RBP16.97■□□□□ 0.31
CTSB-220ENST00000531089 PANK2Q9BZ23 570 aa16.97■□□□□ 0.31
CTSB-220ENST00000531089 CDT1Q9H211 546 aa16.97■□□□□ 0.31
CTSB-220ENST00000531089 IGSF9Q9P2J2 1179 aa16.97■□□□□ 0.31
CTSB-220ENST00000531089 EPS15L1Q9UBC2 864 aa16.97■□□□□ 0.31
CTSB-220ENST00000531089 DMDP11532 3685 aa16.97■□□□□ 0.31
CTSB-220ENST00000531089 CLUHO75153 1309 aa16.97■□□□□ 0.31
CTSB-220ENST00000531089 TMEM189-UBE2V1I3L0A0 370 aa16.96■□□□□ 0.31
CTSB-220ENST00000531089 B3GAT3O94766 335 aa16.96■□□□□ 0.31
CTSB-220ENST00000531089 NPR3P17342 541 aa16.96■□□□□ 0.31
CTSB-220ENST00000531089 FGFR3P22607 806 aa16.96■□□□□ 0.31
CTSB-220ENST00000531089 PROZP22891 400 aa16.96■□□□□ 0.31
CTSB-220ENST00000531089 GBP2P32456 591 aaPredicted RBP16.96■□□□□ 0.31
CTSB-220ENST00000531089 NUBP1P53384 320 aa16.96■□□□□ 0.31
CTSB-220ENST00000531089 SOX4Q06945 474 aaPredicted RBP16.96■□□□□ 0.31
CTSB-220ENST00000531089 ELAVL2Q12926 359 aaKnown RBP16.96■□□□□ 0.31
CTSB-220ENST00000531089 RSPO2Q6UXX9 243 aaPredicted RBP16.96■□□□□ 0.31
CTSB-220ENST00000531089 SV2BQ7L1I2 683 aa16.96■□□□□ 0.31
CTSB-220ENST00000531089 SLC44A3Q8N4M1 653 aa16.96■□□□□ 0.31
CTSB-220ENST00000531089 TMEM161BQ8NDZ6 487 aa16.96■□□□□ 0.31
CTSB-220ENST00000531089 STAMQ92783 540 aa16.96■□□□□ 0.31
CTSB-220ENST00000531089 ZMAT2Q96NC0 199 aaKnown RBP16.96■□□□□ 0.31
CTSB-220ENST00000531089 TCHPQ9BT92 498 aa16.96■□□□□ 0.31
CTSB-220ENST00000531089 ZHX3Q9H4I2 956 aa16.96■□□□□ 0.31
CTSB-220ENST00000531089 PIDD1Q9HB75 910 aa16.96■□□□□ 0.31
CTSB-220ENST00000531089 PARVGQ9HBI0 331 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms