RNA–Protein interactions for RNA: ENST00000530927.5

GMDS-208, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GMDS, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-208ENST00000530927 AAK1Q2M2I8 961 aa20.43■□□□□ 0.86
GMDS-208ENST00000530927 L1TD1Q5T7N2 865 aaKnown RBP20.43■□□□□ 0.86
GMDS-208ENST00000530927 KANK3Q6NY19 840 aa20.43■□□□□ 0.86
GMDS-208ENST00000530927 CCDC65Q8IXS2 484 aa20.43■□□□□ 0.86
GMDS-208ENST00000530927 SCAND2PQ9GZW5 306 aaPredicted RBP20.43■□□□□ 0.86
GMDS-208ENST00000530927 TUBGCP4Q9UGJ1 667 aa20.43■□□□□ 0.86
GMDS-208ENST00000530927 HCFC2Q9Y5Z7 792 aa20.43■□□□□ 0.86
GMDS-208ENST00000530927 GRXCR2A6NFK2 248 aa20.42■□□□□ 0.86
GMDS-208ENST00000530927 OGTO15294 1046 aa20.42■□□□□ 0.86
GMDS-208ENST00000530927 NCK2O43639 380 aa20.42■□□□□ 0.86
GMDS-208ENST00000530927 CNPP09543 421 aaKnown RBP20.42■□□□□ 0.86
GMDS-208ENST00000530927 KCNE1P15382 129 aa20.42■□□□□ 0.86
GMDS-208ENST00000530927 EPCAMP16422 314 aa20.42■□□□□ 0.86
GMDS-208ENST00000530927 HOXD13P35453 343 aa20.42■□□□□ 0.86
GMDS-208ENST00000530927 GUCY2FP51841 1108 aa20.42■□□□□ 0.86
GMDS-208ENST00000530927 NUCB2P80303 420 aa20.42■□□□□ 0.86
GMDS-208ENST00000530927 FSIP1Q8NA03 581 aa20.42■□□□□ 0.86
GMDS-208ENST00000530927 FAM212AQ96EL1 285 aa20.42■□□□□ 0.86
GMDS-208ENST00000530927 PAGE5Q96GU1 130 aa20.42■□□□□ 0.86
GMDS-208ENST00000530927 TTC26A0AVF1 554 aa20.41■□□□□ 0.86
GMDS-208ENST00000530927 CARNS1A5YM72 827 aa20.41■□□□□ 0.86
GMDS-208ENST00000530927 LACTBL1A8MY62 500 aa20.41■□□□□ 0.86
GMDS-208ENST00000530927 CLTAP09496 248 aa20.41■□□□□ 0.86
GMDS-208ENST00000530927 SLFN14P0C7P3 912 aa20.41■□□□□ 0.86
GMDS-208ENST00000530927 RPL17P18621 184 aaKnown RBP20.41■□□□□ 0.86
GMDS-208ENST00000530927 UPP1Q16831 310 aa20.41■□□□□ 0.86
GMDS-208ENST00000530927 RTP2Q5QGT7 225 aa20.41■□□□□ 0.86
GMDS-208ENST00000530927 KIAA0319Q5VV43 1072 aa20.41■□□□□ 0.86
GMDS-208ENST00000530927 PRSS55Q6UWB4 352 aaPredicted RBP20.41■□□□□ 0.86
GMDS-208ENST00000530927 GLYCTKQ8IVS8 523 aa20.41■□□□□ 0.86
GMDS-208ENST00000530927 KLHL5Q96PQ7 755 aa20.41■□□□□ 0.86
GMDS-208ENST00000530927 ACCSQ96QU6 501 aa20.41■□□□□ 0.86
GMDS-208ENST00000530927 UHRF1Q96T88 793 aaPredicted RBP20.41■□□□□ 0.86
GMDS-208ENST00000530927 CDCA3Q99618 268 aaPredicted RBP20.41■□□□□ 0.86
GMDS-208ENST00000530927 MRPL17Q9NRX2 175 aaKnown RBP20.41■□□□□ 0.86
GMDS-208ENST00000530927 CD207Q9UJ71 328 aa20.41■□□□□ 0.86
GMDS-208ENST00000530927 CPSF3Q9UKF6 684 aaKnown RBP20.41■□□□□ 0.86
GMDS-208ENST00000530927 IRAK3Q9Y616 596 aa20.41■□□□□ 0.86
GMDS-208ENST00000530927 PLXNA3P51805 1871 aa20.4■□□□□ 0.86
GMDS-208ENST00000530927 MBTPS2O43462 519 aa20.4■□□□□ 0.86
GMDS-208ENST00000530927 URODP06132 367 aa20.4■□□□□ 0.86
GMDS-208ENST00000530927 PRR29P0C7W0 189 aa20.4■□□□□ 0.86
GMDS-208ENST00000530927 SCP2P22307 547 aa20.4■□□□□ 0.86
GMDS-208ENST00000530927 BRCC3P46736 316 aa20.4■□□□□ 0.86
GMDS-208ENST00000530927 GLUD2P49448 558 aa20.4■□□□□ 0.86
GMDS-208ENST00000530927 AMPD3Q01432 767 aa20.4■□□□□ 0.86
GMDS-208ENST00000530927 FAM171A1Q5VUB5 890 aa20.4■□□□□ 0.86
GMDS-208ENST00000530927 CNNM4Q6P4Q7 775 aa20.4■□□□□ 0.86
GMDS-208ENST00000530927 CEP57L1Q8IYX8 460 aa20.4■□□□□ 0.86
GMDS-208ENST00000530927 HVCN1Q96D96 273 aa20.4■□□□□ 0.86
GMDS-208ENST00000530927 SAAL1Q96ER3 474 aa20.4■□□□□ 0.86
GMDS-208ENST00000530927 CHST7Q9NS84 486 aa20.4■□□□□ 0.86
GMDS-208ENST00000530927 AGO2Q9UKV8 859 aaKnown RBP20.4■□□□□ 0.86
GMDS-208ENST00000530927 CIZ1Q9ULV3 898 aaPredicted RBP20.4■□□□□ 0.86
GMDS-208ENST00000530927 STYXL1Q9Y6J8 313 aa20.4■□□□□ 0.86
GMDS-208ENST00000530927 VWA8A3KMH1 1905 aa20.4■□□□□ 0.86
GMDS-208ENST00000530927 B3GAT3O94766 335 aa20.39■□□□□ 0.85
GMDS-208ENST00000530927 SYKP43405 635 aa20.39■□□□□ 0.85
GMDS-208ENST00000530927 WNT7BP56706 349 aa20.39■□□□□ 0.85
GMDS-208ENST00000530927 DSG1Q02413 1049 aa20.39■□□□□ 0.85
GMDS-208ENST00000530927 EHHADHQ08426 723 aa20.39■□□□□ 0.85
GMDS-208ENST00000530927 SYCE2Q6PIF2 218 aa20.39■□□□□ 0.85
GMDS-208ENST00000530927 CRELD2Q6UXH1 353 aaPredicted RBP20.39■□□□□ 0.85
GMDS-208ENST00000530927 UNC13DQ70J99 1090 aa20.39■□□□□ 0.85
GMDS-208ENST00000530927 CEP57Q86XR8 500 aa20.39■□□□□ 0.85
GMDS-208ENST00000530927 C12orf76Q8N812 135 aaPredicted RBP20.39■□□□□ 0.85
GMDS-208ENST00000530927 SLC22A17Q8WUG5 538 aa20.39■□□□□ 0.85
GMDS-208ENST00000530927 RIN2Q8WYP3 895 aaPredicted RBP20.39■□□□□ 0.85
GMDS-208ENST00000530927 POMGNT1Q8WZA1 660 aa20.39■□□□□ 0.85
GMDS-208ENST00000530927 KIF12Q96FN5 646 aa20.39■□□□□ 0.85
GMDS-208ENST00000530927 FAM84AQ96KN4 292 aa20.39■□□□□ 0.85
GMDS-208ENST00000530927 CBWD1Q9BRT8 395 aa20.39■□□□□ 0.85
GMDS-208ENST00000530927 LRRC27Q9C0I9 530 aa20.39■□□□□ 0.85
GMDS-208ENST00000530927 PCIF1Q9H4Z3 704 aa20.39■□□□□ 0.85
GMDS-208ENST00000530927 RPF1Q9H9Y2 349 aaKnown RBP20.39■□□□□ 0.85
GMDS-208ENST00000530927 MAGEF1Q9HAY2 307 aa20.39■□□□□ 0.85
GMDS-208ENST00000530927 PCDHB13Q9Y5F0 798 aa20.39■□□□□ 0.85
GMDS-208ENST00000530927 ANK1P16157 1881 aa20.39■□□□□ 0.85
GMDS-208ENST00000530927 SF3B1O75533 1304 aaKnown RBP eCLIP20.39■□□□□ 0.855e-6■■■■■ 96.1
GMDS-208ENST00000530927 FAM237AA0A1B0GTK4 181 aa20.38■□□□□ 0.85
GMDS-208ENST00000530927 GOLGA8IPA6NC78 632 aa20.38■□□□□ 0.85
GMDS-208ENST00000530927 GOLGA8JA6NMD2 632 aa20.38■□□□□ 0.85
GMDS-208ENST00000530927 PODXLO00592 558 aa20.38■□□□□ 0.85
GMDS-208ENST00000530927 TEX28O15482 410 aa20.38■□□□□ 0.85
GMDS-208ENST00000530927 KLRC4O43908 158 aa20.38■□□□□ 0.85
GMDS-208ENST00000530927 PPP2R3AQ06190 1150 aa20.38■□□□□ 0.85
GMDS-208ENST00000530927 BMS1Q14692 1282 aaKnown RBP20.38■□□□□ 0.85
GMDS-208ENST00000530927 FAM26FQ5R3K3 315 aa20.38■□□□□ 0.85
GMDS-208ENST00000530927 JADE1Q6IE81 842 aa20.38■□□□□ 0.85
GMDS-208ENST00000530927 KIAA1841Q6NSI8 718 aa20.38■□□□□ 0.85
GMDS-208ENST00000530927 ANKRD54Q6NXT1 300 aa20.38■□□□□ 0.85
GMDS-208ENST00000530927 TMEM184AQ6ZMB5 413 aa20.38■□□□□ 0.85
GMDS-208ENST00000530927 SYCP3Q8IZU3 236 aa20.38■□□□□ 0.85
GMDS-208ENST00000530927 TMEM87AQ8NBN3 555 aa20.38■□□□□ 0.85
GMDS-208ENST00000530927 SMRP1Q8NCR6 262 aa20.38■□□□□ 0.85
GMDS-208ENST00000530927 SLC39A2Q9NP94 309 aa20.38■□□□□ 0.85
GMDS-208ENST00000530927 CD320Q9NPF0 282 aa20.38■□□□□ 0.85
GMDS-208ENST00000530927 A0A1W2PQ27 194 aa20.37■□□□□ 0.85
GMDS-208ENST00000530927 A0A1W2PQ64 194 aa20.37■□□□□ 0.85
GMDS-208ENST00000530927 A0A1W2PQD8 194 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms