RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 WNT10BO00744 389 aa13.13□□□□□ -0.31
SCN3B-206ENST00000530277 TGFB1I1O43294 461 aa13.13□□□□□ -0.31
SCN3B-206ENST00000530277 PHF2O75151 1096 aa13.13□□□□□ -0.31
SCN3B-206ENST00000530277 VCAM1P19320 739 aa13.13□□□□□ -0.31
SCN3B-206ENST00000530277 SLC8A3P57103 927 aa13.13□□□□□ -0.31
SCN3B-206ENST00000530277 CDK17Q00537 523 aa13.13□□□□□ -0.31
SCN3B-206ENST00000530277 PDE1BQ01064 536 aa13.13□□□□□ -0.31
SCN3B-206ENST00000530277 MAPK7Q13164 816 aa13.13□□□□□ -0.31
SCN3B-206ENST00000530277 EMC2Q15006 297 aa13.13□□□□□ -0.31
SCN3B-206ENST00000530277 MDH1BQ5I0G3 518 aa13.13□□□□□ -0.31
SCN3B-206ENST00000530277 HGSNATQ68CP4 663 aa13.13□□□□□ -0.31
SCN3B-206ENST00000530277 ARHGEF18Q6ZSZ5 1173 aa13.13□□□□□ -0.31
SCN3B-206ENST00000530277 SH3BP5LQ7L8J4 393 aa13.13□□□□□ -0.31
SCN3B-206ENST00000530277 CROCCP2Q86T23 111 aa13.13□□□□□ -0.31
SCN3B-206ENST00000530277 UBA3Q8TBC4 463 aa13.13□□□□□ -0.31
SCN3B-206ENST00000530277 TRAPPC12Q8WVT3 735 aa13.13□□□□□ -0.31
SCN3B-206ENST00000530277 GMCL1Q96IK5 515 aa13.13□□□□□ -0.31
SCN3B-206ENST00000530277 SEC16BQ96JE7 1060 aa13.13□□□□□ -0.31
SCN3B-206ENST00000530277 OSBPL8Q9BZF1 889 aa13.13□□□□□ -0.31
SCN3B-206ENST00000530277 KCTD10Q9H3F6 313 aa13.13□□□□□ -0.31
SCN3B-206ENST00000530277 CD248Q9HCU0 757 aa13.13□□□□□ -0.31
SCN3B-206ENST00000530277 FAM49BQ9NUQ9 324 aa13.13□□□□□ -0.31
SCN3B-206ENST00000530277 SETD1AO15047 1707 aaKnown RBP13.13□□□□□ -0.31
SCN3B-206ENST00000530277 ACTR2P61160 394 aa13.13□□□□□ -0.31
SCN3B-206ENST00000530277 ZNF772Q68DY9 489 aaPredicted RBP13.13□□□□□ -0.31
SCN3B-206ENST00000530277 CPNE8Q86YQ8 564 aa13.13□□□□□ -0.31
SCN3B-206ENST00000530277 SLC13A5Q86YT5 568 aaPredicted RBP13.13□□□□□ -0.31
SCN3B-206ENST00000530277 RHOT1Q8IXI2 618 aa13.13□□□□□ -0.31
SCN3B-206ENST00000530277 LNX1Q8TBB1 728 aaPredicted RBP13.13□□□□□ -0.31
SCN3B-206ENST00000530277 RAPGEF5Q92565 580 aa13.13□□□□□ -0.31
SCN3B-206ENST00000530277 SYN2Q92777 582 aaPredicted RBP13.13□□□□□ -0.31
SCN3B-206ENST00000530277 SPATA33Q96N06 139 aa13.13□□□□□ -0.31
SCN3B-206ENST00000530277 RIT2Q99578 217 aa13.13□□□□□ -0.31
SCN3B-206ENST00000530277 FAM167BQ9BTA0 163 aa13.13□□□□□ -0.31
SCN3B-206ENST00000530277 PDGFDQ9GZP0 370 aaPredicted RBP13.13□□□□□ -0.31
SCN3B-206ENST00000530277 WNT8AQ9H1J5 351 aa13.13□□□□□ -0.31
SCN3B-206ENST00000530277 MARCOQ9UEW3 520 aaPredicted RBP13.13□□□□□ -0.31
SCN3B-206ENST00000530277 TRAF3IP3Q9Y228 551 aa13.13□□□□□ -0.31
SCN3B-206ENST00000530277 NOD1Q9Y239 953 aa13.13□□□□□ -0.31
SCN3B-206ENST00000530277 PRPSAP2O60256 369 aa13.12□□□□□ -0.31
SCN3B-206ENST00000530277 PSMC4P43686 418 aa13.12□□□□□ -0.31
SCN3B-206ENST00000530277 CNTN2Q02246 1040 aa13.12□□□□□ -0.31
SCN3B-206ENST00000530277 MYO1EQ12965 1108 aa13.12□□□□□ -0.31
SCN3B-206ENST00000530277 SUPT20HL1Q3ZLR7 823 aa13.12□□□□□ -0.31
SCN3B-206ENST00000530277 NOP9Q86U38 636 aaKnown RBP13.12□□□□□ -0.31
SCN3B-206ENST00000530277 NT5DC3Q86UY8 548 aa13.12□□□□□ -0.31
SCN3B-206ENST00000530277 PDIK1LQ8N165 341 aa13.12□□□□□ -0.31
SCN3B-206ENST00000530277 CFAP61Q8NHU2 1237 aa13.12□□□□□ -0.31
SCN3B-206ENST00000530277 P3H4Q92791 437 aa13.12□□□□□ -0.31
SCN3B-206ENST00000530277 TEX13BQ9BXU2 312 aa13.12□□□□□ -0.31
SCN3B-206ENST00000530277 CNOT10Q9H9A5 744 aaKnown RBP13.12□□□□□ -0.31
SCN3B-206ENST00000530277 TOPAZ1Q8N9V7 1692 aa13.12□□□□□ -0.31
SCN3B-206ENST00000530277 SHBGP04278 402 aa13.12□□□□□ -0.31
SCN3B-206ENST00000530277 SFNP31947 248 aa13.12□□□□□ -0.31
SCN3B-206ENST00000530277 GABPAQ06546 454 aa13.12□□□□□ -0.31
SCN3B-206ENST00000530277 LRRC34Q8IZ02 419 aa13.12□□□□□ -0.31
SCN3B-206ENST00000530277 ZNF280CQ8ND82 737 aa13.12□□□□□ -0.31
SCN3B-206ENST00000530277 LRRN4Q8WUT4 740 aa13.12□□□□□ -0.31
SCN3B-206ENST00000530277 XPO6Q96QU8 1125 aaKnown RBP13.12□□□□□ -0.31
SCN3B-206ENST00000530277 ZSWIM1Q9BR11 485 aa13.12□□□□□ -0.31
SCN3B-206ENST00000530277 MTMR12Q9C0I1 747 aa13.12□□□□□ -0.31
SCN3B-206ENST00000530277 GANQ9H2C0 597 aa13.12□□□□□ -0.31
SCN3B-206ENST00000530277 ETNK1Q9HBU6 452 aa13.12□□□□□ -0.31
SCN3B-206ENST00000530277 SAE1Q9UBE0 346 aaPredicted RBP13.12□□□□□ -0.31
SCN3B-206ENST00000530277 AJAP1Q9UKB5 411 aaPredicted RBP13.12□□□□□ -0.31
SCN3B-206ENST00000530277 GOLGB1Q14789 3259 aaKnown RBP13.12□□□□□ -0.31
SCN3B-206ENST00000530277 RASSF10A6NK89 507 aa13.12□□□□□ -0.31
SCN3B-206ENST00000530277 WDR46O15213 610 aaKnown RBP13.12□□□□□ -0.31
SCN3B-206ENST00000530277 TOM1L1O75674 476 aa13.12□□□□□ -0.31
SCN3B-206ENST00000530277 DGAT1O75907 488 aa13.12□□□□□ -0.31
SCN3B-206ENST00000530277 ICAM1P05362 532 aa13.12□□□□□ -0.31
SCN3B-206ENST00000530277 HOXA10P31260 410 aaPredicted RBP13.12□□□□□ -0.31
SCN3B-206ENST00000530277 PHBP35232 272 aa13.12□□□□□ -0.31
SCN3B-206ENST00000530277 ALCAMQ13740 583 aa13.12□□□□□ -0.31
SCN3B-206ENST00000530277 KIF22Q14807 665 aa13.12□□□□□ -0.31
SCN3B-206ENST00000530277 ATP13A4Q4VNC1 1196 aa13.12□□□□□ -0.31
SCN3B-206ENST00000530277 C1orf186Q6ZWK4 172 aa13.12□□□□□ -0.31
SCN3B-206ENST00000530277 IRF2BP2Q7Z5L9 587 aa13.12□□□□□ -0.31
SCN3B-206ENST00000530277 ETNPPLQ8TBG4 499 aa13.12□□□□□ -0.31
SCN3B-206ENST00000530277 PDCD2LQ9BRP1 358 aa13.12□□□□□ -0.31
SCN3B-206ENST00000530277 MOV10L1Q9BXT6 1211 aaKnown RBP13.12□□□□□ -0.31
SCN3B-206ENST00000530277 TJP3O95049 919 aa13.11□□□□□ -0.31
SCN3B-206ENST00000530277 CDH6P55285 790 aa13.11□□□□□ -0.31
SCN3B-206ENST00000530277 DNAJC3Q13217 504 aa13.11□□□□□ -0.31
SCN3B-206ENST00000530277 ALG3Q92685 438 aa13.11□□□□□ -0.31
SCN3B-206ENST00000530277 FAF2Q96CS3 445 aa13.11□□□□□ -0.31
SCN3B-206ENST00000530277 CFAP57Q96MR6 1250 aa13.11□□□□□ -0.31
SCN3B-206ENST00000530277 CARD9Q9H257 536 aa13.11□□□□□ -0.31
SCN3B-206ENST00000530277 CTNNAL1Q9UBT7 734 aa13.11□□□□□ -0.31
SCN3B-206ENST00000530277 A6NJR5 290 aa13.11□□□□□ -0.31
SCN3B-206ENST00000530277 EIF3DO15371 548 aaKnown RBP eCLIP13.11□□□□□ -0.31
SCN3B-206ENST00000530277 ZBED1O96006 694 aa13.11□□□□□ -0.31
SCN3B-206ENST00000530277 COILP38432 576 aaPredicted RBP13.11□□□□□ -0.31
SCN3B-206ENST00000530277 GCLCP48506 637 aaPredicted RBP13.11□□□□□ -0.31
SCN3B-206ENST00000530277 CLCN3P51790 818 aa13.11□□□□□ -0.31
SCN3B-206ENST00000530277 JAG1P78504 1218 aa13.11□□□□□ -0.31
SCN3B-206ENST00000530277 R3HDM1Q15032 1099 aaKnown RBP13.11□□□□□ -0.31
SCN3B-206ENST00000530277 GPAT2Q6NUI2 795 aa13.11□□□□□ -0.31
SCN3B-206ENST00000530277 CENPUQ71F23 418 aa13.11□□□□□ -0.31
SCN3B-206ENST00000530277 SDCCAG8Q86SQ7 713 aaPredicted RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms