RNA–Protein interactions for RNA: ENST00000530199.5

SVIP-204, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-204ENST00000530199 FBLN5Q9UBX5 448 aa8.31□□□□□ -1.08
SVIP-204ENST00000530199 SPEF1Q9Y4P9 236 aa8.31□□□□□ -1.08
SVIP-204ENST00000530199 RFXAPO00287 272 aa8.3□□□□□ -1.08
SVIP-204ENST00000530199 TGM5O43548 720 aa8.3□□□□□ -1.08
SVIP-204ENST00000530199 CSF2RAP15509 400 aa8.3□□□□□ -1.08
SVIP-204ENST00000530199 CYP2C19P33261 490 aa8.3□□□□□ -1.08
SVIP-204ENST00000530199 RAB27AP51159 221 aa8.3□□□□□ -1.08
SVIP-204ENST00000530199 SESN3P58005 492 aa8.3□□□□□ -1.08
SVIP-204ENST00000530199 HERVK_113P62684 666 aa8.3□□□□□ -1.08
SVIP-204ENST00000530199 IRF9Q00978 393 aa8.3□□□□□ -1.08
SVIP-204ENST00000530199 TMEM199Q8N511 208 aa8.3□□□□□ -1.08
SVIP-204ENST00000530199 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.3□□□□□ -1.08
SVIP-204ENST00000530199 PIP4K2CQ8TBX8 421 aa8.3□□□□□ -1.08
SVIP-204ENST00000530199 SH3RF2Q8TEC5 729 aa8.3□□□□□ -1.08
SVIP-204ENST00000530199 USP33Q8TEY7 942 aa8.3□□□□□ -1.08
SVIP-204ENST00000530199 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.3□□□□□ -1.08
SVIP-204ENST00000530199 SLC5A5Q92911 643 aa8.3□□□□□ -1.08
SVIP-204ENST00000530199 TSR2Q969E8 191 aaKnown RBP8.3□□□□□ -1.08
SVIP-204ENST00000530199 CHMP4CQ96CF2 233 aa8.3□□□□□ -1.08
SVIP-204ENST00000530199 FAM84BQ96KN1 310 aaPredicted RBP8.3□□□□□ -1.08
SVIP-204ENST00000530199 UBE2ZQ9H832 354 aaPredicted RBP8.3□□□□□ -1.08
SVIP-204ENST00000530199 VTA1Q9NP79 307 aa8.3□□□□□ -1.08
SVIP-204ENST00000530199 SLC6A20Q9NP91 592 aa8.3□□□□□ -1.08
SVIP-204ENST00000530199 ACSL6Q9UKU0 697 aa8.3□□□□□ -1.08
SVIP-204ENST00000530199 LRRFIP2Q9Y608 721 aaKnown RBP8.3□□□□□ -1.08
SVIP-204ENST00000530199 TAF6LQ9Y6J9 622 aa8.3□□□□□ -1.08
SVIP-204ENST00000530199 PLXNA3P51805 1871 aa8.3□□□□□ -1.08
SVIP-204ENST00000530199 NCOR2Q9Y618 2525 aa8.29□□□□□ -1.08
SVIP-204ENST00000530199 A0A1W2PQ27 194 aa8.29□□□□□ -1.08
SVIP-204ENST00000530199 A0A1W2PQ64 194 aa8.29□□□□□ -1.08
SVIP-204ENST00000530199 A0A1W2PQC6 194 aa8.29□□□□□ -1.08
SVIP-204ENST00000530199 A0A1W2PQD8 194 aa8.29□□□□□ -1.08
SVIP-204ENST00000530199 SLC15A5A6NIM6 579 aa8.29□□□□□ -1.08
SVIP-204ENST00000530199 CHL1O00533 1208 aa8.29□□□□□ -1.08
SVIP-204ENST00000530199 MAN2B1O00754 1011 aa8.29□□□□□ -1.08
SVIP-204ENST00000530199 KCNK3O14649 394 aa8.29□□□□□ -1.08
SVIP-204ENST00000530199 AKAP10O43572 662 aa8.29□□□□□ -1.08
SVIP-204ENST00000530199 TSPAN6O43657 245 aa8.29□□□□□ -1.08
SVIP-204ENST00000530199 FBXO21O94952 628 aa8.29□□□□□ -1.08
SVIP-204ENST00000530199 PRNPP04156 253 aa8.29□□□□□ -1.08
SVIP-204ENST00000530199 IGKV5-2P06315 115 aa8.29□□□□□ -1.08
SVIP-204ENST00000530199 MSL3P1P0C860 447 aa8.29□□□□□ -1.08
SVIP-204ENST00000530199 IL9P15248 144 aa8.29□□□□□ -1.08
SVIP-204ENST00000530199 HMGCS2P54868 508 aa8.29□□□□□ -1.08
SVIP-204ENST00000530199 ERVK-21P61565 698 aa8.29□□□□□ -1.08
SVIP-204ENST00000530199 IRX3P78415 501 aaPredicted RBP8.29□□□□□ -1.08
SVIP-204ENST00000530199 MVKQ03426 396 aa8.29□□□□□ -1.08
SVIP-204ENST00000530199 CHRNEQ04844 493 aa8.29□□□□□ -1.08
SVIP-204ENST00000530199 SPP2Q13103 211 aa8.29□□□□□ -1.08
SVIP-204ENST00000530199 UBE4AQ14139 1066 aa8.29□□□□□ -1.08
SVIP-204ENST00000530199 PPP2R5AQ15172 486 aa8.29□□□□□ -1.08
SVIP-204ENST00000530199 SLC14A2Q15849 920 aa8.29□□□□□ -1.08
SVIP-204ENST00000530199 KRT40Q6A162 431 aa8.29□□□□□ -1.08
SVIP-204ENST00000530199 FSTL4Q6MZW2 842 aa8.29□□□□□ -1.08
SVIP-204ENST00000530199 GALNT18Q6P9A2 607 aa8.29□□□□□ -1.08
SVIP-204ENST00000530199 ASCL5Q7RTU5 278 aa8.29□□□□□ -1.08
SVIP-204ENST00000530199 NOSTRINQ8IVI9 506 aa8.29□□□□□ -1.08
SVIP-204ENST00000530199 CCAR1Q8IX12 1150 aaKnown RBP8.29□□□□□ -1.08
SVIP-204ENST00000530199 CBARPQ8N350 705 aaPredicted RBP8.29□□□□□ -1.08
SVIP-204ENST00000530199 CLRN3Q8NCR9 226 aa8.29□□□□□ -1.08
SVIP-204ENST00000530199 UPF3BQ9BZI7 483 aaKnown RBP8.29□□□□□ -1.08
SVIP-204ENST00000530199 IL23AQ9NPF7 189 aa8.29□□□□□ -1.08
SVIP-204ENST00000530199 DSEQ9UL01 958 aa8.29□□□□□ -1.08
SVIP-204ENST00000530199 SRPK3Q9UPE1 567 aa8.29□□□□□ -1.08
SVIP-204ENST00000530199 SPO11Q9Y5K1 396 aa8.29□□□□□ -1.08
SVIP-204ENST00000530199 ACACBO00763 2458 aa8.29□□□□□ -1.08
SVIP-204ENST00000530199 DOCK2Q92608 1830 aa8.29□□□□□ -1.08
SVIP-204ENST00000530199 TNKSO95271 1327 aa8.29□□□□□ -1.08
SVIP-204ENST00000530199 TECTAO75443 2155 aa8.28□□□□□ -1.08
SVIP-204ENST00000530199 GVINP1Q7Z2Y8 2422 aa8.28□□□□□ -1.08
SVIP-204ENST00000530199 ANKRD18BA2A2Z9 1011 aa8.28□□□□□ -1.08
SVIP-204ENST00000530199 PRR23AA6NEV1 266 aa8.28□□□□□ -1.08
SVIP-204ENST00000530199 EPOPA6NHQ4 379 aa8.28□□□□□ -1.08
SVIP-204ENST00000530199 NOTOA8MTQ0 251 aa8.28□□□□□ -1.08
SVIP-204ENST00000530199 DVL2O14641 736 aa8.28□□□□□ -1.08
SVIP-204ENST00000530199 NRDCO43847 1150 aa8.28□□□□□ -1.08
SVIP-204ENST00000530199 PEX10O60683 326 aa8.28□□□□□ -1.08
SVIP-204ENST00000530199 COBLO75128 1261 aa8.28□□□□□ -1.08
SVIP-204ENST00000530199 FGBP02675 491 aa8.28□□□□□ -1.08
SVIP-204ENST00000530199 HSPA5P11021 654 aaKnown RBP8.28□□□□□ -1.08
SVIP-204ENST00000530199 MYOGP15173 224 aa8.28□□□□□ -1.08
SVIP-204ENST00000530199 GYG1P46976 350 aa8.28□□□□□ -1.08
SVIP-204ENST00000530199 HK2P52789 917 aa8.28□□□□□ -1.08
SVIP-204ENST00000530199 HERC4Q5GLZ8 1057 aaPredicted RBP8.28□□□□□ -1.08
SVIP-204ENST00000530199 BROXQ5VW32 411 aa8.28□□□□□ -1.08
SVIP-204ENST00000530199 OLFML2BQ68BL8 750 aa8.28□□□□□ -1.08
SVIP-204ENST00000530199 CDC42EP5Q6NZY7 148 aa8.28□□□□□ -1.08
SVIP-204ENST00000530199 ZNF574Q6ZN55 896 aaPredicted RBP8.28□□□□□ -1.08
SVIP-204ENST00000530199 ZBTB46Q86UZ6 589 aa8.28□□□□□ -1.08
SVIP-204ENST00000530199 SPPL2CQ8IUH8 684 aa8.28□□□□□ -1.08
SVIP-204ENST00000530199 PASD1Q8IV76 773 aa8.28□□□□□ -1.08
SVIP-204ENST00000530199 PDZD8Q8NEN9 1154 aa8.28□□□□□ -1.08
SVIP-204ENST00000530199 UHMK1Q8TAS1 419 aaKnown RBP8.28□□□□□ -1.08
SVIP-204ENST00000530199 AHCYL2Q96HN2 611 aaKnown RBP8.28□□□□□ -1.08
SVIP-204ENST00000530199 PLCD4Q9BRC7 762 aa8.28□□□□□ -1.08
SVIP-204ENST00000530199 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.28□□□□□ -1.08
SVIP-204ENST00000530199 VPS13AQ96RL7 3174 aa8.28□□□□□ -1.08
SVIP-204ENST00000530199 DMXL1Q9Y485 3027 aa8.27□□□□□ -1.08
SVIP-204ENST00000530199 KRIT1O00522 736 aa8.27□□□□□ -1.09
SVIP-204ENST00000530199 ENTPD3O75355 529 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms