RNA–Protein interactions for RNA: ENST00000529873.5

CTNND1-221, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-221ENST00000529873 HSPA9P38646 679 aaKnown RBP8.96□□□□□ -0.98
CTNND1-221ENST00000529873 PRAMEP78395 509 aa8.96□□□□□ -0.98
CTNND1-221ENST00000529873 TMEM132DQ14C87 1099 aa8.96□□□□□ -0.98
CTNND1-221ENST00000529873 STOX1Q6ZVD7 989 aa8.96□□□□□ -0.98
CTNND1-221ENST00000529873 GLYCTKQ8IVS8 523 aa8.96□□□□□ -0.98
CTNND1-221ENST00000529873 ZNF34Q8IZ26 560 aa8.96□□□□□ -0.98
CTNND1-221ENST00000529873 ZNF668Q96K58 619 aaPredicted RBP8.96□□□□□ -0.98
CTNND1-221ENST00000529873 EPAS1Q99814 870 aa8.96□□□□□ -0.98
CTNND1-221ENST00000529873 NDFIP2Q9NV92 336 aa8.96□□□□□ -0.98
CTNND1-221ENST00000529873 ZNF70Q9UC06 446 aaPredicted RBP8.96□□□□□ -0.98
CTNND1-221ENST00000529873 C1orf167Q5SNV9 1468 aa8.96□□□□□ -0.98
CTNND1-221ENST00000529873 FRMPD1Q5SYB0 1578 aa8.96□□□□□ -0.98
CTNND1-221ENST00000529873 PTPRUQ92729 1446 aa8.96□□□□□ -0.98
CTNND1-221ENST00000529873 RBP5P82980 135 aa8.96□□□□□ -0.98
CTNND1-221ENST00000529873 SCARF1Q14162 830 aa8.96□□□□□ -0.98
CTNND1-221ENST00000529873 HHIPL2Q6UWX4 724 aa8.96□□□□□ -0.98
CTNND1-221ENST00000529873 YAF2Q8IY57 180 aa8.96□□□□□ -0.98
CTNND1-221ENST00000529873 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.96□□□□□ -0.98
CTNND1-221ENST00000529873 TJP2Q9UDY2 1190 aa8.96□□□□□ -0.98
CTNND1-221ENST00000529873 JCADQ9P266 1359 aa8.96□□□□□ -0.98
CTNND1-221ENST00000529873 ARHGAP10A1A4S6 786 aa8.95□□□□□ -0.98
CTNND1-221ENST00000529873 NBPF26B4DH59 902 aa8.95□□□□□ -0.98
CTNND1-221ENST00000529873 MRPS15P82914 257 aaKnown RBP8.95□□□□□ -0.98
CTNND1-221ENST00000529873 COG2Q14746 738 aa8.95□□□□□ -0.98
CTNND1-221ENST00000529873 EMC2Q15006 297 aa8.95□□□□□ -0.98
CTNND1-221ENST00000529873 MORF4L2Q15014 288 aa8.95□□□□□ -0.98
CTNND1-221ENST00000529873 XKR3Q5GH77 459 aa8.95□□□□□ -0.98
CTNND1-221ENST00000529873 NBPF10Q6P3W6 841 aaKnown RBP8.95□□□□□ -0.98
CTNND1-221ENST00000529873 TTC23LQ6PF05 361 aa8.95□□□□□ -0.98
CTNND1-221ENST00000529873 NBPF15Q8N660 670 aa8.95□□□□□ -0.98
CTNND1-221ENST00000529873 OR9Q1Q8NGQ5 310 aa8.95□□□□□ -0.98
CTNND1-221ENST00000529873 TRIM54Q9BYV2 358 aa8.95□□□□□ -0.98
CTNND1-221ENST00000529873 UBA6A0AVT1 1052 aaPredicted RBP8.95□□□□□ -0.98
CTNND1-221ENST00000529873 KCNN4O15554 427 aa8.95□□□□□ -0.98
CTNND1-221ENST00000529873 DAB1O75553 588 aa8.95□□□□□ -0.98
CTNND1-221ENST00000529873 DGAT1O75907 488 aa8.95□□□□□ -0.98
CTNND1-221ENST00000529873 AARSP49588 968 aaKnown RBP eCLIP8.95□□□□□ -0.983e-6■□□□□ 10.9
CTNND1-221ENST00000529873 TRIM28Q13263 835 aaKnown RBP8.95□□□□□ -0.98
CTNND1-221ENST00000529873 SNAPC2Q13487 334 aa8.95□□□□□ -0.98
CTNND1-221ENST00000529873 STAT4Q14765 748 aa8.95□□□□□ -0.98
CTNND1-221ENST00000529873 VPS72Q15906 364 aa8.95□□□□□ -0.98
CTNND1-221ENST00000529873 GJC2Q5T442 439 aaPredicted RBP8.95□□□□□ -0.98
CTNND1-221ENST00000529873 LRIG3Q6UXM1 1119 aa8.95□□□□□ -0.98
CTNND1-221ENST00000529873 FAM47EQ6ZV65 393 aa8.95□□□□□ -0.98
CTNND1-221ENST00000529873 LINC00116Q8NCU8 138 aa8.95□□□□□ -0.98
CTNND1-221ENST00000529873 SLC35G2Q8TBE7 412 aa8.95□□□□□ -0.98
CTNND1-221ENST00000529873 GRAMD1AQ96CP6 724 aa8.95□□□□□ -0.98
CTNND1-221ENST00000529873 MED15Q96RN5 788 aa8.95□□□□□ -0.98
CTNND1-221ENST00000529873 REEP2Q9BRK0 252 aa8.95□□□□□ -0.98
CTNND1-221ENST00000529873 CCSER1Q9C0I3 900 aa8.95□□□□□ -0.98
CTNND1-221ENST00000529873 DDX47Q9H0S4 455 aaKnown RBP8.95□□□□□ -0.98
CTNND1-221ENST00000529873 COG4Q9H9E3 785 aa8.95□□□□□ -0.98
CTNND1-221ENST00000529873 DYRK4Q9NR20 520 aa8.95□□□□□ -0.98
CTNND1-221ENST00000529873 USP27XA6NNY8 438 aa8.95□□□□□ -0.98
CTNND1-221ENST00000529873 CAMTA2O94983 1202 aa8.95□□□□□ -0.98
CTNND1-221ENST00000529873 ZC3H12BQ5HYM0 836 aaKnown RBP8.95□□□□□ -0.98
CTNND1-221ENST00000529873 CDC42EP5Q6NZY7 148 aa8.95□□□□□ -0.98
CTNND1-221ENST00000529873 CCNYL1Q8N7R7 359 aa8.95□□□□□ -0.98
CTNND1-221ENST00000529873 PPP1R2P1Q96PQ5 205 aa8.95□□□□□ -0.98
CTNND1-221ENST00000529873 PARK7Q99497 189 aaKnown RBP8.95□□□□□ -0.98
CTNND1-221ENST00000529873 BFARQ9NZS9 450 aa8.95□□□□□ -0.98
CTNND1-221ENST00000529873 WDR35Q9P2L0 1181 aa8.95□□□□□ -0.98
CTNND1-221ENST00000529873 STX18Q9P2W9 335 aaKnown RBP8.95□□□□□ -0.98
CTNND1-221ENST00000529873 SNX5Q9Y5X3 404 aa8.95□□□□□ -0.98
CTNND1-221ENST00000529873 DIAPH2O60879 1101 aa8.95□□□□□ -0.98
CTNND1-221ENST00000529873 CYBBP04839 570 aa8.95□□□□□ -0.98
CTNND1-221ENST00000529873 RAD51Q06609 339 aa8.95□□□□□ -0.98
CTNND1-221ENST00000529873 MRPL28Q13084 256 aaKnown RBP8.95□□□□□ -0.98
CTNND1-221ENST00000529873 SF3B3Q15393 1217 aaKnown RBP8.95□□□□□ -0.98
CTNND1-221ENST00000529873 CCDC80Q76M96 950 aa8.95□□□□□ -0.98
CTNND1-221ENST00000529873 DDIASQ8IXT1 998 aa8.95□□□□□ -0.98
CTNND1-221ENST00000529873 ATL2Q8NHH9 583 aa8.95□□□□□ -0.98
CTNND1-221ENST00000529873 RBM46Q8TBY0 533 aaKnown RBP8.95□□□□□ -0.98
CTNND1-221ENST00000529873 IGDCC4Q8TDY8 1250 aa8.95□□□□□ -0.98
CTNND1-221ENST00000529873 UVRAGQ9P2Y5 699 aa8.95□□□□□ -0.98
CTNND1-221ENST00000529873 AFF4Q9UHB7 1163 aaKnown RBP8.95□□□□□ -0.98
CTNND1-221ENST00000529873 A0A1B0GTH6 734 aa8.95□□□□□ -0.98
CTNND1-221ENST00000529873 KBTBD13C9JR72 458 aa8.95□□□□□ -0.98
CTNND1-221ENST00000529873 TRAPPC3O43617 180 aa8.95□□□□□ -0.98
CTNND1-221ENST00000529873 CCDC22O60826 627 aa8.95□□□□□ -0.98
CTNND1-221ENST00000529873 SRGNP10124 158 aa8.95□□□□□ -0.98
CTNND1-221ENST00000529873 HIF1AQ16665 826 aa8.95□□□□□ -0.98
CTNND1-221ENST00000529873 SGSM1Q2NKQ1 1148 aa8.95□□□□□ -0.98
CTNND1-221ENST00000529873 SV2CQ496J9 727 aa8.95□□□□□ -0.98
CTNND1-221ENST00000529873 STYK1Q6J9G0 422 aa8.95□□□□□ -0.98
CTNND1-221ENST00000529873 MTHFD1LQ6UB35 978 aa8.95□□□□□ -0.98
CTNND1-221ENST00000529873 DDX28Q9NUL7 540 aaKnown RBP8.95□□□□□ -0.98
CTNND1-221ENST00000529873 USP32Q8NFA0 1604 aa8.94□□□□□ -0.98
CTNND1-221ENST00000529873 A0A1W2PQJ5 194 aa8.94□□□□□ -0.98
CTNND1-221ENST00000529873 KCNQ2O43526 872 aa8.94□□□□□ -0.98
CTNND1-221ENST00000529873 KDM1AO60341 852 aa8.94□□□□□ -0.98
CTNND1-221ENST00000529873 DNAJC6O75061 913 aa8.94□□□□□ -0.98
CTNND1-221ENST00000529873 RHOBTB3O94955 611 aa8.94□□□□□ -0.98
CTNND1-221ENST00000529873 MYBP10242 640 aa8.94□□□□□ -0.98
CTNND1-221ENST00000529873 BRAFP15056 766 aa8.94□□□□□ -0.98
CTNND1-221ENST00000529873 SCP2P22307 547 aa8.94□□□□□ -0.98
CTNND1-221ENST00000529873 CHRNA5P30532 468 aa8.94□□□□□ -0.98
CTNND1-221ENST00000529873 HSD17B4P51659 736 aa8.94□□□□□ -0.98
CTNND1-221ENST00000529873 PMS1P54277 932 aaKnown RBP8.94□□□□□ -0.98
CTNND1-221ENST00000529873 ANO4Q32M45 955 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms