RNA–Protein interactions for RNA: ENST00000529828.5

PTPRC-213, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 2,336 nt, Biotype non stop decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-213ENST00000529828 AKAP17AQ02040 695 aaKnown RBP3.92□□□□□ -1.78
PTPRC-213ENST00000529828 CYP4A11Q02928 519 aa3.92□□□□□ -1.78
PTPRC-213ENST00000529828 FZD5Q13467 585 aa3.92□□□□□ -1.78
PTPRC-213ENST00000529828 HSP90AA2PQ14568 343 aaPredicted RBP3.92□□□□□ -1.78
PTPRC-213ENST00000529828 AXDND1Q5T1B0 1012 aaPredicted RBP3.92□□□□□ -1.78
PTPRC-213ENST00000529828 NOTUMQ6P988 496 aa3.92□□□□□ -1.78
PTPRC-213ENST00000529828 B3GNT9Q6UX72 402 aa3.92□□□□□ -1.78
PTPRC-213ENST00000529828 ZNF852Q6ZMS4 543 aa3.92□□□□□ -1.78
PTPRC-213ENST00000529828 PRR23CQ6ZRP0 262 aa3.92□□□□□ -1.78
PTPRC-213ENST00000529828 DHX32Q7L7V1 743 aaKnown RBP3.92□□□□□ -1.78
PTPRC-213ENST00000529828 SRGAP1Q7Z6B7 1085 aa3.92□□□□□ -1.78
PTPRC-213ENST00000529828 FERMT3Q86UX7 667 aa3.92□□□□□ -1.78
PTPRC-213ENST00000529828 GSTCDQ8NEC7 633 aa3.92□□□□□ -1.78
PTPRC-213ENST00000529828 ETNPPLQ8TBG4 499 aa3.92□□□□□ -1.78
PTPRC-213ENST00000529828 NETO1Q8TDF5 533 aa3.92□□□□□ -1.78
PTPRC-213ENST00000529828 ASAP3Q8TDY4 903 aa3.92□□□□□ -1.78
PTPRC-213ENST00000529828 NELL1Q92832 810 aa3.92□□□□□ -1.78
PTPRC-213ENST00000529828 BRF1Q92994 677 aa3.92□□□□□ -1.78
PTPRC-213ENST00000529828 CLDN23Q96B33 292 aa3.92□□□□□ -1.78
PTPRC-213ENST00000529828 YTHDC1Q96MU7 727 aaKnown RBP3.92□□□□□ -1.78
PTPRC-213ENST00000529828 LXNQ9BS40 222 aa3.92□□□□□ -1.78
PTPRC-213ENST00000529828 TTPALQ9BTX7 342 aa3.92□□□□□ -1.78
PTPRC-213ENST00000529828 UBN1Q9NPG3 1134 aa3.92□□□□□ -1.78
PTPRC-213ENST00000529828 SEMA4GQ9NTN9 838 aa3.92□□□□□ -1.78
PTPRC-213ENST00000529828 RBM12Q9NTZ6 932 aaKnown RBP3.92□□□□□ -1.78
PTPRC-213ENST00000529828 RGL1Q9NZL6 768 aa3.92□□□□□ -1.78
PTPRC-213ENST00000529828 FNIP2Q9P278 1114 aa3.92□□□□□ -1.78
PTPRC-213ENST00000529828 ANGPTL2Q9UKU9 493 aa3.92□□□□□ -1.78
PTPRC-213ENST00000529828 USP20Q9Y2K6 914 aa3.92□□□□□ -1.78
PTPRC-213ENST00000529828 SF3B1O75533 1304 aaKnown RBP eCLIP3.92□□□□□ -1.782e-8■■■■■ 71.8
PTPRC-213ENST00000529828 WDR81Q562E7 1941 aa3.92□□□□□ -1.78
PTPRC-213ENST00000529828 GCN1Q92616 2671 aaKnown RBP3.92□□□□□ -1.78
PTPRC-213ENST00000529828 A0A087WWV3 80 aa3.92□□□□□ -1.78
PTPRC-213ENST00000529828 I3L4J1 428 aa3.92□□□□□ -1.78
PTPRC-213ENST00000529828 PRPF3O43395 683 aaKnown RBP3.92□□□□□ -1.78
PTPRC-213ENST00000529828 PAPLNO95428 1278 aa3.92□□□□□ -1.78
PTPRC-213ENST00000529828 RETP07949 1114 aa3.92□□□□□ -1.78
PTPRC-213ENST00000529828 HNRNPA1P09651 372 aaKnown RBP eCLIP3.92□□□□□ -1.78
PTPRC-213ENST00000529828 ARF4P18085 180 aaPredicted RBP3.92□□□□□ -1.78
PTPRC-213ENST00000529828 OR1D2P34982 312 aa3.92□□□□□ -1.78
PTPRC-213ENST00000529828 QARSP47897 775 aaKnown RBP3.92□□□□□ -1.78
PTPRC-213ENST00000529828 MBTD1Q05BQ5 628 aa3.92□□□□□ -1.78
PTPRC-213ENST00000529828 ADCY1Q08828 1119 aa3.92□□□□□ -1.78
PTPRC-213ENST00000529828 GRIK3Q13003 919 aa3.92□□□□□ -1.78
PTPRC-213ENST00000529828 CAPSQ13938 189 aa3.92□□□□□ -1.78
PTPRC-213ENST00000529828 SIM2Q14190 667 aaPredicted RBP3.92□□□□□ -1.78
PTPRC-213ENST00000529828 CTTNQ14247 550 aaKnown RBP3.92□□□□□ -1.78
PTPRC-213ENST00000529828 SF3A2Q15428 464 aaKnown RBP3.92□□□□□ -1.78
PTPRC-213ENST00000529828 AMHR2Q16671 573 aa3.92□□□□□ -1.78
PTPRC-213ENST00000529828 INF2Q27J81 1249 aa3.92□□□□□ -1.78
PTPRC-213ENST00000529828 Q4G0T1 1027 aa3.92□□□□□ -1.78
PTPRC-213ENST00000529828 XKR9Q5GH70 373 aa3.92□□□□□ -1.78
PTPRC-213ENST00000529828 N4BP2L1Q5TBK1 243 aaPredicted RBP3.92□□□□□ -1.78
PTPRC-213ENST00000529828 LAIR1Q6GTX8 287 aa3.92□□□□□ -1.78
PTPRC-213ENST00000529828 NCAPH2Q6IBW4 605 aa3.92□□□□□ -1.78
PTPRC-213ENST00000529828 RSPO2Q6UXX9 243 aaPredicted RBP3.92□□□□□ -1.78
PTPRC-213ENST00000529828 Q6ZS52 159 aa3.92□□□□□ -1.78
PTPRC-213ENST00000529828 Q6ZUG5 572 aa3.92□□□□□ -1.78
PTPRC-213ENST00000529828 MAEAQ7L5Y9 396 aa3.92□□□□□ -1.78
PTPRC-213ENST00000529828 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.92□□□□□ -1.78
PTPRC-213ENST00000529828 GPIHBP1Q8IV16 184 aa3.92□□□□□ -1.78
PTPRC-213ENST00000529828 TEX2Q8IWB9 1127 aa3.92□□□□□ -1.78
PTPRC-213ENST00000529828 CCDC148Q8NFR7 591 aa3.92□□□□□ -1.78
PTPRC-213ENST00000529828 RDM1Q8NG50 284 aa3.92□□□□□ -1.78
PTPRC-213ENST00000529828 TTC8Q8TAM2 541 aa3.92□□□□□ -1.78
PTPRC-213ENST00000529828 LNX1Q8TBB1 728 aaPredicted RBP3.92□□□□□ -1.78
PTPRC-213ENST00000529828 BICD2Q8TD16 824 aa3.92□□□□□ -1.78
PTPRC-213ENST00000529828 TCEAL4Q96EI5 215 aa3.92□□□□□ -1.78
PTPRC-213ENST00000529828 DYDC2Q96IM9 177 aa3.92□□□□□ -1.78
PTPRC-213ENST00000529828 JPH2Q9BR39 696 aaPredicted RBP3.92□□□□□ -1.78
PTPRC-213ENST00000529828 OSBPL6Q9BZF3 934 aa3.92□□□□□ -1.78
PTPRC-213ENST00000529828 CSRNP2Q9H175 543 aa3.92□□□□□ -1.78
PTPRC-213ENST00000529828 SMOC1Q9H4F8 434 aa3.92□□□□□ -1.78
PTPRC-213ENST00000529828 DHX33Q9H6R0 707 aaKnown RBP3.92□□□□□ -1.78
PTPRC-213ENST00000529828 BRD9Q9H8M2 597 aa3.92□□□□□ -1.78
PTPRC-213ENST00000529828 LMAN1LQ9HAT1 526 aa3.92□□□□□ -1.78
PTPRC-213ENST00000529828 RXFP3Q9NSD7 469 aa3.92□□□□□ -1.78
PTPRC-213ENST00000529828 RYDENQ9NUL5 291 aaKnown RBP3.92□□□□□ -1.78
PTPRC-213ENST00000529828 C2orf42Q9NWW7 574 aa3.92□□□□□ -1.78
PTPRC-213ENST00000529828 DDX25Q9UHL0 483 aaKnown RBP3.92□□□□□ -1.78
PTPRC-213ENST00000529828 VAV3Q9UKW4 847 aa3.92□□□□□ -1.78
PTPRC-213ENST00000529828 GIT1Q9Y2X7 761 aa3.92□□□□□ -1.78
PTPRC-213ENST00000529828 ZFP37Q9Y6Q3 630 aaPredicted RBP3.92□□□□□ -1.78
PTPRC-213ENST00000529828 NCANO14594 1321 aa3.91□□□□□ -1.78
PTPRC-213ENST00000529828 NCAM2O15394 837 aa3.91□□□□□ -1.78
PTPRC-213ENST00000529828 ECI2O75521 394 aa3.91□□□□□ -1.78
PTPRC-213ENST00000529828 RHOP08100 348 aa3.91□□□□□ -1.78
PTPRC-213ENST00000529828 GJA1P17302 382 aa3.91□□□□□ -1.78
PTPRC-213ENST00000529828 LIG1P18858 919 aa3.91□□□□□ -1.78
PTPRC-213ENST00000529828 FCARP24071 287 aa3.91□□□□□ -1.78
PTPRC-213ENST00000529828 GDI1P31150 447 aa3.91□□□□□ -1.78
PTPRC-213ENST00000529828 YWHABP31946 246 aaKnown RBP3.91□□□□□ -1.78
PTPRC-213ENST00000529828 RFC5P40937 340 aa3.91□□□□□ -1.78
PTPRC-213ENST00000529828 VIPR2P41587 438 aa3.91□□□□□ -1.78
PTPRC-213ENST00000529828 MAGEA9P43362 315 aa3.91□□□□□ -1.78
PTPRC-213ENST00000529828 RPS9P46781 194 aaKnown RBP3.91□□□□□ -1.78
PTPRC-213ENST00000529828 SOX9P48436 509 aa3.91□□□□□ -1.78
PTPRC-213ENST00000529828 USP11P51784 963 aa3.91□□□□□ -1.78
PTPRC-213ENST00000529828 ARPP19P56211 112 aa3.91□□□□□ -1.78
PTPRC-213ENST00000529828 PTENP60484 403 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms