RNA–Protein interactions for RNA: ENST00000529553.1

AMBRA1-207, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-207ENST00000529553 MOXD1Q6UVY6 613 aa12.91□□□□□ -0.34
AMBRA1-207ENST00000529553 VITQ6UXI7 678 aa12.91□□□□□ -0.34
AMBRA1-207ENST00000529553 DHX32Q7L7V1 743 aaKnown RBP12.91□□□□□ -0.34
AMBRA1-207ENST00000529553 C4orf19Q8IY42 314 aa12.91□□□□□ -0.34
AMBRA1-207ENST00000529553 CCDC148Q8NFR7 591 aa12.91□□□□□ -0.34
AMBRA1-207ENST00000529553 ZNF461Q8TAF7 563 aa12.91□□□□□ -0.34
AMBRA1-207ENST00000529553 ETNPPLQ8TBG4 499 aa12.91□□□□□ -0.34
AMBRA1-207ENST00000529553 TBCKQ8TEA7 893 aa12.91□□□□□ -0.34
AMBRA1-207ENST00000529553 GAB3Q8WWW8 586 aa12.91□□□□□ -0.34
AMBRA1-207ENST00000529553 ZC3H10Q96K80 434 aaKnown RBP12.91□□□□□ -0.34
AMBRA1-207ENST00000529553 KLF18A0A0U1RQI7 1052 aa12.9□□□□□ -0.34
AMBRA1-207ENST00000529553 TMEM189-UBE2V1I3L0A0 370 aa12.9□□□□□ -0.34
AMBRA1-207ENST00000529553 ARNTLO00327 626 aa12.9□□□□□ -0.34
AMBRA1-207ENST00000529553 AKAP3O75969 853 aa12.9□□□□□ -0.34
AMBRA1-207ENST00000529553 ABLIM3O94929 683 aa12.9□□□□□ -0.34
AMBRA1-207ENST00000529553 LRG1P02750 347 aa12.9□□□□□ -0.34
AMBRA1-207ENST00000529553 ELF1P32519 619 aa12.9□□□□□ -0.34
AMBRA1-207ENST00000529553 MBTD1Q05BQ5 628 aa12.9□□□□□ -0.34
AMBRA1-207ENST00000529553 RING1Q06587 406 aa12.9□□□□□ -0.34
AMBRA1-207ENST00000529553 PPP2R5CQ13362 524 aa12.9□□□□□ -0.34
AMBRA1-207ENST00000529553 EMC2Q15006 297 aa12.9□□□□□ -0.34
AMBRA1-207ENST00000529553 CYP4A22Q5TCH4 519 aa12.9□□□□□ -0.34
AMBRA1-207ENST00000529553 RNF43Q68DV7 783 aa12.9□□□□□ -0.34
AMBRA1-207ENST00000529553 HEATR6Q6AI08 1181 aaKnown RBP12.9□□□□□ -0.34
AMBRA1-207ENST00000529553 ANKS3Q6ZW76 656 aa12.9□□□□□ -0.34
AMBRA1-207ENST00000529553 CSGALNACT1Q8TDX6 532 aa12.9□□□□□ -0.34
AMBRA1-207ENST00000529553 HASPINQ8TF76 798 aa12.9□□□□□ -0.34
AMBRA1-207ENST00000529553 ADAM33Q9BZ11 813 aa12.9□□□□□ -0.34
AMBRA1-207ENST00000529553 GPR88Q9GZN0 384 aa12.9□□□□□ -0.34
AMBRA1-207ENST00000529553 SH3GLB2Q9NR46 395 aa12.9□□□□□ -0.34
AMBRA1-207ENST00000529553 KLK14Q9P0G3 267 aa12.9□□□□□ -0.34
AMBRA1-207ENST00000529553 CDY1Q9Y6F8 540 aa12.9□□□□□ -0.34
AMBRA1-207ENST00000529553 DOCK6Q96HP0 2047 aa12.89□□□□□ -0.35
AMBRA1-207ENST00000529553 WDR27A2RRH5 827 aa12.89□□□□□ -0.35
AMBRA1-207ENST00000529553 CASTOR2A6NHX0 329 aa12.89□□□□□ -0.35
AMBRA1-207ENST00000529553 CHADO15335 359 aa12.89□□□□□ -0.35
AMBRA1-207ENST00000529553 TRAPPC3O43617 180 aa12.89□□□□□ -0.35
AMBRA1-207ENST00000529553 NPTXRO95502 500 aa12.89□□□□□ -0.35
AMBRA1-207ENST00000529553 YWHABP31946 246 aaKnown RBP12.89□□□□□ -0.35
AMBRA1-207ENST00000529553 RBM25P49756 843 aaKnown RBP12.89□□□□□ -0.35
AMBRA1-207ENST00000529553 AKAP17AQ02040 695 aaKnown RBP12.89□□□□□ -0.35
AMBRA1-207ENST00000529553 NAB2Q15742 525 aa12.89□□□□□ -0.35
AMBRA1-207ENST00000529553 RNF20Q5VTR2 975 aa12.89□□□□□ -0.35
AMBRA1-207ENST00000529553 DIEXFQ68CQ4 756 aaKnown RBP12.89□□□□□ -0.35
AMBRA1-207ENST00000529553 SLC8B1Q6J4K2 584 aa12.89□□□□□ -0.35
AMBRA1-207ENST00000529553 PDZD4Q76G19 769 aaPredicted RBP12.89□□□□□ -0.35
AMBRA1-207ENST00000529553 RALGPS2Q86X27 583 aaPredicted RBP12.89□□□□□ -0.35
AMBRA1-207ENST00000529553 TCEAL8Q8IYN2 117 aa12.89□□□□□ -0.35
AMBRA1-207ENST00000529553 LEMD2Q8NC56 503 aa12.89□□□□□ -0.35
AMBRA1-207ENST00000529553 GATA6Q92908 595 aa12.89□□□□□ -0.35
AMBRA1-207ENST00000529553 FAM20AQ96MK3 541 aa12.89□□□□□ -0.35
AMBRA1-207ENST00000529553 MTRQ99707 1265 aa12.89□□□□□ -0.35
AMBRA1-207ENST00000529553 CORO1BQ9BR76 489 aa12.89□□□□□ -0.35
AMBRA1-207ENST00000529553 MAFFQ9ULX9 164 aa12.89□□□□□ -0.35
AMBRA1-207ENST00000529553 LHX6Q9UPM6 363 aa12.89□□□□□ -0.35
AMBRA1-207ENST00000529553 MYBPHLA2RUH7 354 aa12.88□□□□□ -0.35
AMBRA1-207ENST00000529553 TAF4O00268 1085 aa12.88□□□□□ -0.35
AMBRA1-207ENST00000529553 EML1O00423 815 aa12.88□□□□□ -0.35
AMBRA1-207ENST00000529553 RPP40O75818 363 aaKnown RBP12.88□□□□□ -0.35
AMBRA1-207ENST00000529553 CEACAM1P13688 526 aa12.88□□□□□ -0.35
AMBRA1-207ENST00000529553 ATF2P15336 505 aa12.88□□□□□ -0.35
AMBRA1-207ENST00000529553 NOVA1P51513 510 aaKnown RBP12.88□□□□□ -0.35
AMBRA1-207ENST00000529553 KPNA1P52294 538 aaPredicted RBP12.88□□□□□ -0.35
AMBRA1-207ENST00000529553 TSGA10IPQ3SY00 556 aa12.88□□□□□ -0.35
AMBRA1-207ENST00000529553 DAB2IPQ5VWQ8 1189 aa12.88□□□□□ -0.35
AMBRA1-207ENST00000529553 TCEAL4Q96EI5 215 aa12.88□□□□□ -0.35
AMBRA1-207ENST00000529553 PRIMPOLQ96LW4 560 aa12.88□□□□□ -0.35
AMBRA1-207ENST00000529553 ZSWIM3Q96MP5 696 aa12.88□□□□□ -0.35
AMBRA1-207ENST00000529553 CACNG4Q9UBN1 327 aa12.88□□□□□ -0.35
AMBRA1-207ENST00000529553 NOTCH4Q99466 2003 aa12.88□□□□□ -0.35
AMBRA1-207ENST00000529553 WDR81Q562E7 1941 aa12.88□□□□□ -0.35
AMBRA1-207ENST00000529553 NRG2O14511 850 aaPredicted RBP12.87□□□□□ -0.35
AMBRA1-207ENST00000529553 PRRG1O14668 218 aa12.87□□□□□ -0.35
AMBRA1-207ENST00000529553 PTGESO14684 152 aa12.87□□□□□ -0.35
AMBRA1-207ENST00000529553 TDP2O95551 362 aa12.87□□□□□ -0.35
AMBRA1-207ENST00000529553 HMGB1P09429 215 aaKnown RBP12.87□□□□□ -0.35
AMBRA1-207ENST00000529553 CSRP1P21291 193 aaKnown RBP12.87□□□□□ -0.35
AMBRA1-207ENST00000529553 ARL2P36404 184 aa12.87□□□□□ -0.35
AMBRA1-207ENST00000529553 MPLP40238 635 aa12.87□□□□□ -0.35
AMBRA1-207ENST00000529553 VIPR2P41587 438 aa12.87□□□□□ -0.35
AMBRA1-207ENST00000529553 FCHO2Q0JRZ9 810 aa12.87□□□□□ -0.35
AMBRA1-207ENST00000529553 FOXC1Q12948 553 aa12.87□□□□□ -0.35
AMBRA1-207ENST00000529553 EPHA7Q15375 998 aa12.87□□□□□ -0.35
AMBRA1-207ENST00000529553 CCDC6Q16204 474 aa12.87□□□□□ -0.35
AMBRA1-207ENST00000529553 XKR9Q5GH70 373 aa12.87□□□□□ -0.35
AMBRA1-207ENST00000529553 IQCEQ6IPM2 695 aa12.87□□□□□ -0.35
AMBRA1-207ENST00000529553 KBTBD6Q86V97 674 aa12.87□□□□□ -0.35
AMBRA1-207ENST00000529553 YAF2Q8IY57 180 aa12.87□□□□□ -0.35
AMBRA1-207ENST00000529553 ELMOD1Q8N336 334 aa12.87□□□□□ -0.35
AMBRA1-207ENST00000529553 ZNF512Q96ME7 567 aaPredicted RBP12.87□□□□□ -0.35
AMBRA1-207ENST00000529553 UROC1Q96N76 676 aa12.87□□□□□ -0.35
AMBRA1-207ENST00000529553 ZSWIM4Q9H7M6 989 aa12.87□□□□□ -0.35
AMBRA1-207ENST00000529553 RBM12Q9NTZ6 932 aaKnown RBP12.87□□□□□ -0.35
AMBRA1-207ENST00000529553 WRAP73Q9P2S5 460 aaPredicted RBP12.87□□□□□ -0.35
AMBRA1-207ENST00000529553 HEPACAM2A8MVW5 462 aa12.86□□□□□ -0.35
AMBRA1-207ENST00000529553 SPECC1L-ADORA2AF8WAN1 911 aa12.86□□□□□ -0.35
AMBRA1-207ENST00000529553 B4GALT5O43286 388 aa12.86□□□□□ -0.35
AMBRA1-207ENST00000529553 ATG13O75143 517 aa12.86□□□□□ -0.35
AMBRA1-207ENST00000529553 B3GAT3O94766 335 aa12.86□□□□□ -0.35
AMBRA1-207ENST00000529553 CCR2P41597 374 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms