RNA–Protein interactions for RNA: ENST00000529133.5

CAPN1-217, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-217ENST00000529133 RALGAPA2Q2PPJ7 1873 aa12.41□□□□□ -0.42
CAPN1-217ENST00000529133 PAN2Q504Q3 1202 aaKnown RBP12.41□□□□□ -0.42
CAPN1-217ENST00000529133 TCP11X2Q5H9J9 407 aa12.41□□□□□ -0.42
CAPN1-217ENST00000529133 LMBRD2Q68DH5 695 aaPredicted RBP12.41□□□□□ -0.42
CAPN1-217ENST00000529133 WDR49Q8IV35 697 aa12.41□□□□□ -0.42
CAPN1-217ENST00000529133 URGCPQ8TCY9 931 aa12.41□□□□□ -0.42
CAPN1-217ENST00000529133 RSPH1Q8WYR4 309 aa12.41□□□□□ -0.42
CAPN1-217ENST00000529133 SLC35C1Q96A29 364 aa12.41□□□□□ -0.42
CAPN1-217ENST00000529133 ZNF689Q96CS4 500 aaPredicted RBP12.41□□□□□ -0.42
CAPN1-217ENST00000529133 KIF12Q96FN5 646 aa12.41□□□□□ -0.42
CAPN1-217ENST00000529133 PPP1R10Q96QC0 940 aaKnown RBP12.41□□□□□ -0.42
CAPN1-217ENST00000529133 FNBP1Q96RU3 617 aa12.41□□□□□ -0.42
CAPN1-217ENST00000529133 TSPAN18Q96SJ8 248 aa12.41□□□□□ -0.42
CAPN1-217ENST00000529133 POP1Q99575 1024 aaKnown RBP12.41□□□□□ -0.42
CAPN1-217ENST00000529133 RBSNQ9H1K0 784 aa12.41□□□□□ -0.42
CAPN1-217ENST00000529133 PRO3102Q9H379 93 aa12.41□□□□□ -0.42
CAPN1-217ENST00000529133 TBC1D13Q9NVG8 400 aa12.41□□□□□ -0.42
CAPN1-217ENST00000529133 INTS13Q9NVM9 706 aa12.41□□□□□ -0.42
CAPN1-217ENST00000529133 TUBGCP4Q9UGJ1 667 aa12.41□□□□□ -0.42
CAPN1-217ENST00000529133 DERAQ9Y315 318 aa12.41□□□□□ -0.42
CAPN1-217ENST00000529133 C2CD2Q9Y426 696 aa12.41□□□□□ -0.42
CAPN1-217ENST00000529133 GOLGA6L19H0YKK7 550 aa12.4□□□□□ -0.42
CAPN1-217ENST00000529133 B4GALT3O60512 393 aa12.4□□□□□ -0.42
CAPN1-217ENST00000529133 ATP1A3P13637 1013 aa12.4□□□□□ -0.42
CAPN1-217ENST00000529133 MTIF2P46199 727 aaKnown RBP12.4□□□□□ -0.42
CAPN1-217ENST00000529133 HTRA4P83105 476 aaPredicted RBP12.4□□□□□ -0.42
CAPN1-217ENST00000529133 TFAMQ00059 246 aaKnown RBP12.4□□□□□ -0.42
CAPN1-217ENST00000529133 SOX4Q06945 474 aaPredicted RBP12.4□□□□□ -0.42
CAPN1-217ENST00000529133 NAB2Q15742 525 aa12.4□□□□□ -0.42
CAPN1-217ENST00000529133 ZBTB6Q15916 424 aa12.4□□□□□ -0.42
CAPN1-217ENST00000529133 DCAF17Q5H9S7 520 aaPredicted RBP12.4□□□□□ -0.42
CAPN1-217ENST00000529133 TCERG1LQ5VWI1 586 aa12.4□□□□□ -0.42
CAPN1-217ENST00000529133 FAM109BQ6ICB4 259 aaPredicted RBP12.4□□□□□ -0.42
CAPN1-217ENST00000529133 USP37Q86T82 979 aa12.4□□□□□ -0.42
CAPN1-217ENST00000529133 NT5DC4Q86YG4 428 aa12.4□□□□□ -0.42
CAPN1-217ENST00000529133 CREBRFQ8IUR6 639 aa12.4□□□□□ -0.42
CAPN1-217ENST00000529133 CMTR2Q8IYT2 770 aaKnown RBP12.4□□□□□ -0.42
CAPN1-217ENST00000529133 LRRC43Q8N309 656 aa12.4□□□□□ -0.42
CAPN1-217ENST00000529133 TMEM130Q8N3G9 435 aa12.4□□□□□ -0.42
CAPN1-217ENST00000529133 OR5B17Q8NGF7 314 aa12.4□□□□□ -0.42
CAPN1-217ENST00000529133 C18orf25Q96B23 403 aaPredicted RBP12.4□□□□□ -0.42
CAPN1-217ENST00000529133 YME1L1Q96TA2 773 aa12.4□□□□□ -0.42
CAPN1-217ENST00000529133 MRPL9Q9BYD2 267 aaKnown RBP12.4□□□□□ -0.42
CAPN1-217ENST00000529133 MTMR12Q9C0I1 747 aa12.4□□□□□ -0.42
CAPN1-217ENST00000529133 HCSTQ9UBK5 93 aa12.4□□□□□ -0.42
CAPN1-217ENST00000529133 UBQLN1Q9UMX0 589 aaKnown RBP12.4□□□□□ -0.42
CAPN1-217ENST00000529133 PTPRSQ13332 1948 aa12.4□□□□□ -0.42
CAPN1-217ENST00000529133 TTC3P53804 2025 aa12.39□□□□□ -0.43
CAPN1-217ENST00000529133 THP07101 528 aa12.39□□□□□ -0.43
CAPN1-217ENST00000529133 TNNI1P19237 187 aa12.39□□□□□ -0.43
CAPN1-217ENST00000529133 GUCY2FP51841 1108 aa12.39□□□□□ -0.43
CAPN1-217ENST00000529133 TPM4P67936 248 aa12.39□□□□□ -0.43
CAPN1-217ENST00000529133 PPP3CAQ08209 521 aa12.39□□□□□ -0.43
CAPN1-217ENST00000529133 DSC1Q08554 894 aa12.39□□□□□ -0.43
CAPN1-217ENST00000529133 KRT31Q15323 416 aa12.39□□□□□ -0.43
CAPN1-217ENST00000529133 MAN2A1Q16706 1144 aa12.39□□□□□ -0.43
CAPN1-217ENST00000529133 CHRDL2Q6WN34 429 aa12.39□□□□□ -0.43
CAPN1-217ENST00000529133 TDHQ8IZJ6 230 aa12.39□□□□□ -0.43
CAPN1-217ENST00000529133 ZNF516Q92618 1163 aa12.39□□□□□ -0.43
CAPN1-217ENST00000529133 ZBED2Q9BTP6 218 aa12.39□□□□□ -0.43
CAPN1-217ENST00000529133 SLC38A7Q9NVC3 462 aa12.39□□□□□ -0.43
CAPN1-217ENST00000529133 TAB2Q9NYJ8 693 aa12.39□□□□□ -0.43
CAPN1-217ENST00000529133 KANSL3Q9P2N6 904 aa12.39□□□□□ -0.43
CAPN1-217ENST00000529133 LIMA1Q9UHB6 759 aaKnown RBP12.39□□□□□ -0.43
CAPN1-217ENST00000529133 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.39□□□□□ -0.43
CAPN1-217ENST00000529133 DNAH12Q6ZR08 3092 aa12.38□□□□□ -0.43
CAPN1-217ENST00000529133 GRXCR1A8MXD5 290 aa12.38□□□□□ -0.43
CAPN1-217ENST00000529133 XPOTO43592 962 aaKnown RBP12.38□□□□□ -0.43
CAPN1-217ENST00000529133 TLL1O43897 1013 aa12.38□□□□□ -0.43
CAPN1-217ENST00000529133 STX10O60499 249 aa12.38□□□□□ -0.43
CAPN1-217ENST00000529133 DDHD2O94830 711 aa12.38□□□□□ -0.43
CAPN1-217ENST00000529133 TNNC2P02585 160 aa12.38□□□□□ -0.43
CAPN1-217ENST00000529133 C4BPAP04003 597 aaKnown RBP12.38□□□□□ -0.43
CAPN1-217ENST00000529133 TMEM191BP0C7N4 346 aa12.38□□□□□ -0.43
CAPN1-217ENST00000529133 CYP3A5P20815 502 aa12.38□□□□□ -0.43
CAPN1-217ENST00000529133 CDK11BP21127 795 aaKnown RBP12.38□□□□□ -0.43
CAPN1-217ENST00000529133 GTF2H1P32780 548 aa12.38□□□□□ -0.43
CAPN1-217ENST00000529133 GCLMP48507 274 aa12.38□□□□□ -0.43
CAPN1-217ENST00000529133 RABGGTBP53611 331 aa12.38□□□□□ -0.43
CAPN1-217ENST00000529133 AP3M2P53677 418 aa12.38□□□□□ -0.43
CAPN1-217ENST00000529133 RNASELQ05823 741 aaKnown RBP12.38□□□□□ -0.43
CAPN1-217ENST00000529133 TUSC3Q13454 348 aa12.38□□□□□ -0.43
CAPN1-217ENST00000529133 BTG3Q14201 252 aaPredicted RBP12.38□□□□□ -0.43
CAPN1-217ENST00000529133 DUOXA2Q1HG44 320 aa12.38□□□□□ -0.43
CAPN1-217ENST00000529133 MIIPQ5JXC2 388 aa12.38□□□□□ -0.43
CAPN1-217ENST00000529133 C15orf39Q6ZRI6 1047 aa12.38□□□□□ -0.43
CAPN1-217ENST00000529133 APTXQ7Z2E3 356 aaKnown RBP12.38□□□□□ -0.43
CAPN1-217ENST00000529133 ZNF280BQ86YH2 543 aa12.38□□□□□ -0.43
CAPN1-217ENST00000529133 BEST2Q8NFU1 509 aa12.38□□□□□ -0.43
CAPN1-217ENST00000529133 SP7Q8TDD2 431 aaPredicted RBP12.38□□□□□ -0.43
CAPN1-217ENST00000529133 CACTINQ8WUQ7 758 aaKnown RBP12.38□□□□□ -0.43
CAPN1-217ENST00000529133 ANKRD36BP1Q96IX9 119 aa12.38□□□□□ -0.43
CAPN1-217ENST00000529133 RAD9AQ99638 391 aa12.38□□□□□ -0.43
CAPN1-217ENST00000529133 TUBGCP2Q9BSJ2 902 aa12.38□□□□□ -0.43
CAPN1-217ENST00000529133 NRDE2Q9H7Z3 1164 aa12.38□□□□□ -0.43
CAPN1-217ENST00000529133 MMRN2Q9H8L6 949 aa12.38□□□□□ -0.43
CAPN1-217ENST00000529133 GOLGA2P5Q9HBQ8 144 aa12.38□□□□□ -0.43
CAPN1-217ENST00000529133 CACNG4Q9UBN1 327 aa12.38□□□□□ -0.43
CAPN1-217ENST00000529133 INSL6Q9Y581 213 aa12.38□□□□□ -0.43
CAPN1-217ENST00000529133 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms