RNA–Protein interactions for RNA: ENST00000528877.5

ITGB1-218, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-218ENST00000528877 KCNT2Q6UVM3 1135 aa7.84□□□□□ -1.15
ITGB1-218ENST00000528877 LRRC55Q6ZSA7 311 aa7.84□□□□□ -1.15
ITGB1-218ENST00000528877 CATSPER4Q7RTX7 472 aa7.84□□□□□ -1.15
ITGB1-218ENST00000528877 MRPL10Q7Z7H8 261 aaKnown RBP7.84□□□□□ -1.15
ITGB1-218ENST00000528877 KRTAP1-3Q8IUG1 177 aa7.84□□□□□ -1.15
ITGB1-218ENST00000528877 KSR1Q8IVT5 923 aa7.84□□□□□ -1.15
ITGB1-218ENST00000528877 TPH2Q8IWU9 490 aa7.84□□□□□ -1.15
ITGB1-218ENST00000528877 ABI1Q8IZP0 508 aa7.84□□□□□ -1.15
ITGB1-218ENST00000528877 EFHBQ8N7U6 833 aa7.84□□□□□ -1.15
ITGB1-218ENST00000528877 C4orf32Q8N8J7 132 aa7.84□□□□□ -1.15
ITGB1-218ENST00000528877 IGSF22Q8N9C0 903 aa7.84□□□□□ -1.15
ITGB1-218ENST00000528877 FAM184AQ8NB25 1140 aa7.84□□□□□ -1.15
ITGB1-218ENST00000528877 MCPH1Q8NEM0 835 aa7.84□□□□□ -1.15
ITGB1-218ENST00000528877 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.84□□□□□ -1.15
ITGB1-218ENST00000528877 POF1BQ8WVV4 589 aa7.84□□□□□ -1.15
ITGB1-218ENST00000528877 TMEM143Q96AN5 459 aa7.84□□□□□ -1.15
ITGB1-218ENST00000528877 PBXIP1Q96AQ6 731 aa7.84□□□□□ -1.15
ITGB1-218ENST00000528877 TMX3Q96JJ7 454 aa7.84□□□□□ -1.15
ITGB1-218ENST00000528877 ZNF668Q96K58 619 aaPredicted RBP7.84□□□□□ -1.15
ITGB1-218ENST00000528877 MSLNLQ96KJ4 702 aa7.84□□□□□ -1.15
ITGB1-218ENST00000528877 SUSD3Q96L08 255 aa7.84□□□□□ -1.15
ITGB1-218ENST00000528877 ZNF558Q96NG5 402 aa7.84□□□□□ -1.15
ITGB1-218ENST00000528877 CDCA3Q99618 268 aaPredicted RBP7.84□□□□□ -1.15
ITGB1-218ENST00000528877 MINDY3Q9H8M7 445 aa7.84□□□□□ -1.15
ITGB1-218ENST00000528877 ALG13Q9NP73 1137 aaKnown RBP7.84□□□□□ -1.15
ITGB1-218ENST00000528877 TLR9Q9NR96 1032 aa7.84□□□□□ -1.15
ITGB1-218ENST00000528877 TYW1Q9NV66 732 aaKnown RBP7.84□□□□□ -1.15
ITGB1-218ENST00000528877 STK39Q9UEW8 545 aa7.84□□□□□ -1.15
ITGB1-218ENST00000528877 PRKAG3Q9UGI9 489 aa7.84□□□□□ -1.15
ITGB1-218ENST00000528877 NOL7Q9UMY1 257 aaKnown RBP7.84□□□□□ -1.15
ITGB1-218ENST00000528877 FAM50BQ9Y247 325 aa7.84□□□□□ -1.15
ITGB1-218ENST00000528877 DNMT3AQ9Y6K1 912 aaPredicted RBP7.84□□□□□ -1.15
ITGB1-218ENST00000528877 ZBTB39O15060 712 aa7.83□□□□□ -1.16
ITGB1-218ENST00000528877 TSPAN1O60635 241 aa7.83□□□□□ -1.16
ITGB1-218ENST00000528877 MED24O75448 989 aa7.83□□□□□ -1.16
ITGB1-218ENST00000528877 CSDE1O75534 798 aaKnown RBP7.83□□□□□ -1.16
ITGB1-218ENST00000528877 EYA4O95677 639 aa7.83□□□□□ -1.16
ITGB1-218ENST00000528877 GLP2RO95838 553 aa7.83□□□□□ -1.16
ITGB1-218ENST00000528877 EPXP11678 715 aa7.83□□□□□ -1.16
ITGB1-218ENST00000528877 NCLP19338 710 aaKnown RBP7.83□□□□□ -1.16
ITGB1-218ENST00000528877 IRS1P35568 1242 aa7.83□□□□□ -1.16
ITGB1-218ENST00000528877 TOB1P50616 345 aaPredicted RBP7.83□□□□□ -1.16
ITGB1-218ENST00000528877 MBTD1Q05BQ5 628 aa7.83□□□□□ -1.16
ITGB1-218ENST00000528877 COASYQ13057 564 aa7.83□□□□□ -1.16
ITGB1-218ENST00000528877 ADAM15Q13444 863 aa7.83□□□□□ -1.16
ITGB1-218ENST00000528877 SMAD4Q13485 552 aaKnown RBP7.83□□□□□ -1.16
ITGB1-218ENST00000528877 KCNC3Q14003 757 aa7.83□□□□□ -1.16
ITGB1-218ENST00000528877 UBXN11Q5T124 520 aa7.83□□□□□ -1.16
ITGB1-218ENST00000528877 GLB1LQ6UWU2 654 aa7.83□□□□□ -1.16
ITGB1-218ENST00000528877 TMEM184AQ6ZMB5 413 aa7.83□□□□□ -1.16
ITGB1-218ENST00000528877 CATSPER3Q86XQ3 398 aa7.83□□□□□ -1.16
ITGB1-218ENST00000528877 FAM178BQ8IXR5 827 aa7.83□□□□□ -1.16
ITGB1-218ENST00000528877 THNSL1Q8IYQ7 743 aa7.83□□□□□ -1.16
ITGB1-218ENST00000528877 SLC39A11Q8N1S5 342 aa7.83□□□□□ -1.16
ITGB1-218ENST00000528877 RNF149Q8NC42 400 aa7.83□□□□□ -1.16
ITGB1-218ENST00000528877 SMRP1Q8NCR6 262 aa7.83□□□□□ -1.16
ITGB1-218ENST00000528877 ERMNQ8TAM6 284 aa7.83□□□□□ -1.16
ITGB1-218ENST00000528877 HELQQ8TDG4 1101 aa7.83□□□□□ -1.16
ITGB1-218ENST00000528877 ASAP3Q8TDY4 903 aa7.83□□□□□ -1.16
ITGB1-218ENST00000528877 MRPS27Q92552 414 aaKnown RBP7.83□□□□□ -1.16
ITGB1-218ENST00000528877 PRIMPOLQ96LW4 560 aa7.83□□□□□ -1.16
ITGB1-218ENST00000528877 CEP63Q96MT8 703 aa7.83□□□□□ -1.16
ITGB1-218ENST00000528877 CCDC43Q96MW1 224 aaKnown RBP7.83□□□□□ -1.16
ITGB1-218ENST00000528877 NACC1Q96RE7 527 aa7.83□□□□□ -1.16
ITGB1-218ENST00000528877 NGRNQ9NPE2 291 aaKnown RBP7.83□□□□□ -1.16
ITGB1-218ENST00000528877 MYO7AQ13402 2215 aa7.83□□□□□ -1.16
ITGB1-218ENST00000528877 H3BQ06 376 aaPredicted RBP7.82□□□□□ -1.16
ITGB1-218ENST00000528877 TGFBR3LH3BV60 316 aa7.82□□□□□ -1.16
ITGB1-218ENST00000528877 USO1O60763 962 aaKnown RBP7.82□□□□□ -1.16
ITGB1-218ENST00000528877 ERLIN2O94905 339 aa7.82□□□□□ -1.16
ITGB1-218ENST00000528877 SRGAP2CP0DJJ0 459 aa7.82□□□□□ -1.16
ITGB1-218ENST00000528877 AMPD1P23109 780 aa7.82□□□□□ -1.16
ITGB1-218ENST00000528877 GLRA2P23416 452 aa7.82□□□□□ -1.16
ITGB1-218ENST00000528877 TECP42680 631 aa7.82□□□□□ -1.16
ITGB1-218ENST00000528877 ZP2Q05996 745 aa7.82□□□□□ -1.16
ITGB1-218ENST00000528877 GNL2Q13823 731 aaKnown RBP7.82□□□□□ -1.16
ITGB1-218ENST00000528877 PDIA5Q14554 519 aa7.82□□□□□ -1.16
ITGB1-218ENST00000528877 SMAD2Q15796 467 aaKnown RBP7.82□□□□□ -1.16
ITGB1-218ENST00000528877 DUSP6Q16828 381 aa7.82□□□□□ -1.16
ITGB1-218ENST00000528877 FAM187BQ17R55 369 aa7.82□□□□□ -1.16
ITGB1-218ENST00000528877 RILPL1Q5EBL4 403 aa7.82□□□□□ -1.16
ITGB1-218ENST00000528877 NOMO2Q5JPE7 1267 aa7.82□□□□□ -1.16
ITGB1-218ENST00000528877 NOTUMQ6P988 496 aa7.82□□□□□ -1.16
ITGB1-218ENST00000528877 AGMOQ6ZNB7 445 aa7.82□□□□□ -1.16
ITGB1-218ENST00000528877 ADGRD2Q7Z7M1 963 aa7.82□□□□□ -1.16
ITGB1-218ENST00000528877 ALYREFQ86V81 257 aaKnown RBP7.82□□□□□ -1.16
ITGB1-218ENST00000528877 CNNM3Q8NE01 707 aa7.82□□□□□ -1.16
ITGB1-218ENST00000528877 PIGOQ8TEQ8 1089 aa7.82□□□□□ -1.16
ITGB1-218ENST00000528877 PGBD4Q96DM1 585 aa7.82□□□□□ -1.16
ITGB1-218ENST00000528877 NECAB3Q96P71 396 aaPredicted RBP7.82□□□□□ -1.16
ITGB1-218ENST00000528877 RAB34Q9BZG1 259 aa7.82□□□□□ -1.16
ITGB1-218ENST00000528877 CSRNP2Q9H175 543 aa7.82□□□□□ -1.16
ITGB1-218ENST00000528877 POLR3FQ9H1D9 316 aaPredicted RBP7.82□□□□□ -1.16
ITGB1-218ENST00000528877 UBN1Q9NPG3 1134 aa7.82□□□□□ -1.16
ITGB1-218ENST00000528877 BRD7Q9NPI1 651 aa7.82□□□□□ -1.16
ITGB1-218ENST00000528877 TBC1D13Q9NVG8 400 aa7.82□□□□□ -1.16
ITGB1-218ENST00000528877 CLDND1Q9NY35 253 aa7.82□□□□□ -1.16
ITGB1-218ENST00000528877 SPG21Q9NZD8 308 aa7.82□□□□□ -1.16
ITGB1-218ENST00000528877 CLEC1BQ9P126 229 aa7.82□□□□□ -1.16
ITGB1-218ENST00000528877 MKL2Q9ULH7 1088 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms