RNA–Protein interactions for RNA: ENST00000528614.1

AP002008.3-201, humanhuman

TSL 1 (best) BASIC

Gene AP002008.3, Length 2,587 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP002008.3-201ENST00000528614 CENPTQ96BT3 561 aa11.23□□□□□ -0.61
AP002008.3-201ENST00000528614 SEC16BQ96JE7 1060 aa11.23□□□□□ -0.61
AP002008.3-201ENST00000528614 XPO6Q96QU8 1125 aaKnown RBP11.23□□□□□ -0.61
AP002008.3-201ENST00000528614 POLR3FQ9H1D9 316 aaPredicted RBP11.23□□□□□ -0.61
AP002008.3-201ENST00000528614 C5orf60A6NFR6 353 aa11.23□□□□□ -0.61
AP002008.3-201ENST00000528614 RIPK2O43353 540 aa11.23□□□□□ -0.61
AP002008.3-201ENST00000528614 ZC3H11AO75152 810 aaKnown RBP eCLIP11.23□□□□□ -0.61
AP002008.3-201ENST00000528614 FSBPO95073 299 aa11.23□□□□□ -0.61
AP002008.3-201ENST00000528614 CHN1P15882 459 aa11.23□□□□□ -0.61
AP002008.3-201ENST00000528614 GTF2A1P52655 376 aaPredicted RBP11.23□□□□□ -0.61
AP002008.3-201ENST00000528614 PRKCEQ02156 737 aa11.23□□□□□ -0.61
AP002008.3-201ENST00000528614 C2CD6Q53TS8 623 aa11.23□□□□□ -0.61
AP002008.3-201ENST00000528614 SGO2Q562F6 1265 aa11.23□□□□□ -0.61
AP002008.3-201ENST00000528614 CHADLQ6NUI6 762 aa11.23□□□□□ -0.61
AP002008.3-201ENST00000528614 LLGL2Q6P1M3 1020 aa11.23□□□□□ -0.61
AP002008.3-201ENST00000528614 C15orf39Q6ZRI6 1047 aa11.23□□□□□ -0.61
AP002008.3-201ENST00000528614 SAMD7Q7Z3H4 446 aa11.23□□□□□ -0.61
AP002008.3-201ENST00000528614 CPLX4Q7Z7G2 160 aa11.23□□□□□ -0.61
AP002008.3-201ENST00000528614 CCDC25Q86WR0 208 aa11.23□□□□□ -0.61
AP002008.3-201ENST00000528614 REPS2Q8NFH8 660 aa11.23□□□□□ -0.61
AP002008.3-201ENST00000528614 NSUN6Q8TEA1 469 aaKnown RBP11.23□□□□□ -0.61
AP002008.3-201ENST00000528614 MYCBPQ99417 103 aaPredicted RBP11.23□□□□□ -0.61
AP002008.3-201ENST00000528614 SELENOSQ9BQE4 189 aa11.23□□□□□ -0.61
AP002008.3-201ENST00000528614 ATP6V0A4Q9HBG4 840 aa11.23□□□□□ -0.61
AP002008.3-201ENST00000528614 JPH1Q9HDC5 661 aaPredicted RBP11.23□□□□□ -0.61
AP002008.3-201ENST00000528614 C1orf112Q9NSG2 853 aa11.23□□□□□ -0.61
AP002008.3-201ENST00000528614 ARHGAP28Q9P2N2 729 aa11.23□□□□□ -0.61
AP002008.3-201ENST00000528614 SLC9A2Q9UBY0 812 aa11.23□□□□□ -0.61
AP002008.3-201ENST00000528614 MROH7Q68CQ1 1323 aa11.23□□□□□ -0.61
AP002008.3-201ENST00000528614 MYPNQ86TC9 1320 aa11.23□□□□□ -0.61
AP002008.3-201ENST00000528614 EXTL3O43909 919 aa11.23□□□□□ -0.61
AP002008.3-201ENST00000528614 TNNI1P19237 187 aa11.23□□□□□ -0.61
AP002008.3-201ENST00000528614 RRM1P23921 792 aa11.23□□□□□ -0.61
AP002008.3-201ENST00000528614 MMP13P45452 471 aa11.23□□□□□ -0.61
AP002008.3-201ENST00000528614 LIG4P49917 911 aa11.23□□□□□ -0.61
AP002008.3-201ENST00000528614 WNT7BP56706 349 aa11.23□□□□□ -0.61
AP002008.3-201ENST00000528614 RTP1P59025 263 aa11.23□□□□□ -0.61
AP002008.3-201ENST00000528614 ZNF280AP59817 542 aaPredicted RBP11.23□□□□□ -0.61
AP002008.3-201ENST00000528614 ACTR2P61160 394 aa11.23□□□□□ -0.61
AP002008.3-201ENST00000528614 ADCY2Q08462 1091 aa11.23□□□□□ -0.61
AP002008.3-201ENST00000528614 MTERF2Q49AM1 385 aa11.23□□□□□ -0.61
AP002008.3-201ENST00000528614 WDR44Q5JSH3 913 aa11.23□□□□□ -0.61
AP002008.3-201ENST00000528614 ABHD15Q6UXT9 468 aa11.23□□□□□ -0.61
AP002008.3-201ENST00000528614 EPS8L3Q8TE67 593 aaKnown RBP11.23□□□□□ -0.61
AP002008.3-201ENST00000528614 NCAPGQ9BPX3 1015 aa11.23□□□□□ -0.61
AP002008.3-201ENST00000528614 TMEM109Q9BVC6 243 aa11.23□□□□□ -0.61
AP002008.3-201ENST00000528614 PLVAPQ9BX97 442 aa11.23□□□□□ -0.61
AP002008.3-201ENST00000528614 ADAM7Q9H2U9 754 aa11.23□□□□□ -0.61
AP002008.3-201ENST00000528614 CHST7Q9NS84 486 aa11.23□□□□□ -0.61
AP002008.3-201ENST00000528614 TNS1Q9HBL0 1735 aaKnown RBP11.22□□□□□ -0.61
AP002008.3-201ENST00000528614 FER1L6Q2WGJ9 1857 aa11.22□□□□□ -0.61
AP002008.3-201ENST00000528614 HLA-DRAP01903 254 aa11.22□□□□□ -0.61
AP002008.3-201ENST00000528614 C4BPAP04003 597 aaKnown RBP11.22□□□□□ -0.61
AP002008.3-201ENST00000528614 DRD4P21917 467 aa11.22□□□□□ -0.61
AP002008.3-201ENST00000528614 SLCO1A2P46721 670 aa11.22□□□□□ -0.61
AP002008.3-201ENST00000528614 ACOT2P49753 483 aa11.22□□□□□ -0.61
AP002008.3-201ENST00000528614 KRT17Q04695 432 aa11.22□□□□□ -0.61
AP002008.3-201ENST00000528614 ENPEPQ07075 957 aa11.22□□□□□ -0.61
AP002008.3-201ENST00000528614 CALCOCO2Q13137 446 aa11.22□□□□□ -0.61
AP002008.3-201ENST00000528614 PSMD6Q15008 389 aa11.22□□□□□ -0.61
AP002008.3-201ENST00000528614 SPOPLQ6IQ16 392 aa11.22□□□□□ -0.61
AP002008.3-201ENST00000528614 ZKSCAN4Q969J2 545 aaPredicted RBP11.22□□□□□ -0.61
AP002008.3-201ENST00000528614 CABS1Q96KC9 395 aa11.22□□□□□ -0.61
AP002008.3-201ENST00000528614 FAM81BQ96LP2 452 aa11.22□□□□□ -0.61
AP002008.3-201ENST00000528614 FNBP1Q96RU3 617 aa11.22□□□□□ -0.61
AP002008.3-201ENST00000528614 FAM129AQ9BZQ8 928 aa11.22□□□□□ -0.61
AP002008.3-201ENST00000528614 AVENQ9NQS1 362 aaPredicted RBP11.22□□□□□ -0.61
AP002008.3-201ENST00000528614 HACL1Q9UJ83 578 aa11.22□□□□□ -0.61
AP002008.3-201ENST00000528614 PCDHB2Q9Y5E7 798 aa11.22□□□□□ -0.61
AP002008.3-201ENST00000528614 NFASCO94856 1347 aa11.22□□□□□ -0.61
AP002008.3-201ENST00000528614 H0YHG0 523 aa11.22□□□□□ -0.61
AP002008.3-201ENST00000528614 RASGRF2O14827 1237 aa11.22□□□□□ -0.61
AP002008.3-201ENST00000528614 AGTP01019 485 aa11.22□□□□□ -0.61
AP002008.3-201ENST00000528614 DSG3P32926 999 aa11.22□□□□□ -0.61
AP002008.3-201ENST00000528614 NLRP11P59045 1033 aaKnown RBP11.22□□□□□ -0.61
AP002008.3-201ENST00000528614 CLDN10P78369 228 aa11.22□□□□□ -0.61
AP002008.3-201ENST00000528614 TMEM132BQ14DG7 1078 aa11.22□□□□□ -0.61
AP002008.3-201ENST00000528614 FAM43BQ6ZT52 329 aaPredicted RBP11.22□□□□□ -0.61
AP002008.3-201ENST00000528614 CCDC121Q6ZUS5 278 aa11.22□□□□□ -0.61
AP002008.3-201ENST00000528614 CROCCP2Q86T23 111 aa11.22□□□□□ -0.61
AP002008.3-201ENST00000528614 ZNF677Q86XU0 584 aa11.22□□□□□ -0.61
AP002008.3-201ENST00000528614 ATG4AQ8WYN0 398 aa11.22□□□□□ -0.61
AP002008.3-201ENST00000528614 CHMP6Q96FZ7 201 aa11.22□□□□□ -0.61
AP002008.3-201ENST00000528614 HERPUD2Q9BSE4 406 aa11.22□□□□□ -0.61
AP002008.3-201ENST00000528614 KIAA1586Q9HCI6 787 aa11.22□□□□□ -0.61
AP002008.3-201ENST00000528614 ZNF214Q9UL59 606 aaPredicted RBP11.22□□□□□ -0.61
AP002008.3-201ENST00000528614 TP73O15350 636 aa11.21□□□□□ -0.61
AP002008.3-201ENST00000528614 CFHP08603 1231 aa11.21□□□□□ -0.61
AP002008.3-201ENST00000528614 MYBL1P10243 752 aa11.21□□□□□ -0.61
AP002008.3-201ENST00000528614 PIK3CAP42336 1068 aa11.21□□□□□ -0.61
AP002008.3-201ENST00000528614 HMGCS2P54868 508 aa11.21□□□□□ -0.61
AP002008.3-201ENST00000528614 BPIFB4P59827 614 aa11.21□□□□□ -0.61
AP002008.3-201ENST00000528614 ACTN3Q08043 901 aaPredicted RBP11.21□□□□□ -0.61
AP002008.3-201ENST00000528614 AUHQ13825 339 aaKnown RBP11.21□□□□□ -0.61
AP002008.3-201ENST00000528614 ZACNQ401N2 412 aa11.21□□□□□ -0.61
AP002008.3-201ENST00000528614 DAB2IPQ5VWQ8 1189 aa11.21□□□□□ -0.61
AP002008.3-201ENST00000528614 TDRD10Q5VZ19 366 aaKnown RBP11.21□□□□□ -0.61
AP002008.3-201ENST00000528614 SCYL3Q8IZE3 742 aa11.21□□□□□ -0.61
AP002008.3-201ENST00000528614 CACNA2D3Q8IZS8 1091 aa11.21□□□□□ -0.61
AP002008.3-201ENST00000528614 ZNF280CQ8ND82 737 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms