RNA–Protein interactions for RNA: ENST00000527739.5

CAPN1-211, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-211ENST00000527739 SMG7Q92540 1137 aaKnown RBP21.08■□□□□ 0.97
CAPN1-211ENST00000527739 PLEKHA4Q9H4M7 779 aa21.08■□□□□ 0.97
CAPN1-211ENST00000527739 SLC38A7Q9NVC3 462 aa21.08■□□□□ 0.97
CAPN1-211ENST00000527739 CCDC39Q9UFE4 941 aa21.08■□□□□ 0.97
CAPN1-211ENST00000527739 USP34Q70CQ2 3546 aa21.07■□□□□ 0.96
CAPN1-211ENST00000527739 K7ENM7 598 aa21.07■□□□□ 0.96
CAPN1-211ENST00000527739 ABLIM1O14639 778 aa21.07■□□□□ 0.96
CAPN1-211ENST00000527739 TRAPPC3O43617 180 aa21.07■□□□□ 0.96
CAPN1-211ENST00000527739 ASGR2P07307 311 aa21.07■□□□□ 0.96
CAPN1-211ENST00000527739 IGFBP6P24592 240 aaPredicted RBP21.07■□□□□ 0.96
CAPN1-211ENST00000527739 DDIT3P35638 169 aa21.07■□□□□ 0.96
CAPN1-211ENST00000527739 PTPN5P54829 565 aa21.07■□□□□ 0.96
CAPN1-211ENST00000527739 NCKAP1LP55160 1127 aa21.07■□□□□ 0.96
CAPN1-211ENST00000527739 ALKAL1Q6UXT8 129 aa21.07■□□□□ 0.96
CAPN1-211ENST00000527739 ZPBP2Q6X784 338 aa21.07■□□□□ 0.96
CAPN1-211ENST00000527739 USP49Q70CQ1 688 aa21.07■□□□□ 0.96
CAPN1-211ENST00000527739 OTOP3Q7RTS5 596 aa21.07■□□□□ 0.96
CAPN1-211ENST00000527739 LNX1Q8TBB1 728 aaPredicted RBP21.07■□□□□ 0.96
CAPN1-211ENST00000527739 PIK3R5Q8WYR1 880 aa21.07■□□□□ 0.96
CAPN1-211ENST00000527739 LARP4BQ92615 738 aaKnown RBP21.07■□□□□ 0.96
CAPN1-211ENST00000527739 DDX27Q96GQ7 796 aaKnown RBP21.07■□□□□ 0.96
CAPN1-211ENST00000527739 SNX27Q96L92 541 aa21.07■□□□□ 0.96
CAPN1-211ENST00000527739 CLIC6Q96NY7 704 aa21.07■□□□□ 0.96
CAPN1-211ENST00000527739 CLSTN3Q9BQT9 956 aa21.07■□□□□ 0.96
CAPN1-211ENST00000527739 CCSER1Q9C0I3 900 aa21.07■□□□□ 0.96
CAPN1-211ENST00000527739 PARVGQ9HBI0 331 aa21.07■□□□□ 0.96
CAPN1-211ENST00000527739 MTMR6Q9Y217 621 aa21.07■□□□□ 0.96
CAPN1-211ENST00000527739 USTQ9Y2C2 406 aa21.07■□□□□ 0.96
CAPN1-211ENST00000527739 ZDBF2Q9HCK1 2354 aa21.07■□□□□ 0.96
CAPN1-211ENST00000527739 I3L4J1 428 aa21.06■□□□□ 0.96
CAPN1-211ENST00000527739 STX6O43752 255 aa21.06■□□□□ 0.96
CAPN1-211ENST00000527739 TRAK2O60296 914 aa21.06■□□□□ 0.96
CAPN1-211ENST00000527739 BRD1O95696 1058 aa21.06■□□□□ 0.96
CAPN1-211ENST00000527739 TXLNAP40222 546 aa21.06■□□□□ 0.96
CAPN1-211ENST00000527739 BRCC3P46736 316 aa21.06■□□□□ 0.96
CAPN1-211ENST00000527739 LIG4P49917 911 aa21.06■□□□□ 0.96
CAPN1-211ENST00000527739 SOX4Q06945 474 aaPredicted RBP21.06■□□□□ 0.96
CAPN1-211ENST00000527739 UPP1Q16831 310 aa21.06■□□□□ 0.96
CAPN1-211ENST00000527739 PDXDC1Q6P996 788 aa21.06■□□□□ 0.96
CAPN1-211ENST00000527739 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.06■□□□□ 0.96
CAPN1-211ENST00000527739 CMASQ8NFW8 434 aaPredicted RBP21.06■□□□□ 0.96
CAPN1-211ENST00000527739 HDAC7Q8WUI4 952 aa21.06■□□□□ 0.96
CAPN1-211ENST00000527739 ZMAT2Q96NC0 199 aaKnown RBP21.06■□□□□ 0.96
CAPN1-211ENST00000527739 FAM86C1Q9NVL1 165 aa21.06■□□□□ 0.96
CAPN1-211ENST00000527739 FBXO2Q9UK22 296 aaPredicted RBP21.06■□□□□ 0.96
CAPN1-211ENST00000527739 SRPRBQ9Y5M8 271 aaKnown RBP21.06■□□□□ 0.96
CAPN1-211ENST00000527739 TDRD15B5MCY1 1934 aaKnown RBP21.06■□□□□ 0.96
CAPN1-211ENST00000527739 PODXLO00592 558 aa21.05■□□□□ 0.96
CAPN1-211ENST00000527739 HSP90AA1P07900 732 aaKnown RBP21.05■□□□□ 0.96
CAPN1-211ENST00000527739 GBP2P32456 591 aaPredicted RBP21.05■□□□□ 0.96
CAPN1-211ENST00000527739 MTMR3Q13615 1198 aa21.05■□□□□ 0.96
CAPN1-211ENST00000527739 XKR4Q5GH76 650 aa21.05■□□□□ 0.96
CAPN1-211ENST00000527739 RRAGBQ5VZM2 374 aa21.05■□□□□ 0.96
CAPN1-211ENST00000527739 LILRA6Q6PI73 481 aa21.05■□□□□ 0.96
CAPN1-211ENST00000527739 DYMQ7RTS9 669 aa21.05■□□□□ 0.96
CAPN1-211ENST00000527739 ZDHHC14Q8IZN3 488 aa21.05■□□□□ 0.96
CAPN1-211ENST00000527739 KRI1Q8N9T8 703 aaKnown RBP21.05■□□□□ 0.96
CAPN1-211ENST00000527739 C18orf25Q96B23 403 aaPredicted RBP21.05■□□□□ 0.96
CAPN1-211ENST00000527739 PANK2Q9BZ23 570 aa21.05■□□□□ 0.96
CAPN1-211ENST00000527739 ZSCAN16Q9H4T2 348 aaPredicted RBP21.05■□□□□ 0.96
CAPN1-211ENST00000527739 TBX20Q9UMR3 447 aa21.05■□□□□ 0.96
CAPN1-211ENST00000527739 SORCS3Q9UPU3 1222 aa21.05■□□□□ 0.96
CAPN1-211ENST00000527739 NUB1Q9Y5A7 615 aa21.05■□□□□ 0.96
CAPN1-211ENST00000527739 TMEM189-UBE2V1I3L0A0 370 aa21.04■□□□□ 0.96
CAPN1-211ENST00000527739 HNRNPDLO14979 420 aaKnown RBP21.04■□□□□ 0.96
CAPN1-211ENST00000527739 KCNE1P15382 129 aa21.04■□□□□ 0.96
CAPN1-211ENST00000527739 FGFR3P22607 806 aa21.04■□□□□ 0.96
CAPN1-211ENST00000527739 TKTP29401 623 aaKnown RBP21.04■□□□□ 0.96
CAPN1-211ENST00000527739 AVPR2P30518 371 aa21.04■□□□□ 0.96
CAPN1-211ENST00000527739 OR1D2P34982 312 aa21.04■□□□□ 0.96
CAPN1-211ENST00000527739 MCL1Q07820 350 aa21.04■□□□□ 0.96
CAPN1-211ENST00000527739 LIN9Q5TKA1 542 aa21.04■□□□□ 0.96
CAPN1-211ENST00000527739 FOXD4L5Q5VV16 416 aaPredicted RBP21.04■□□□□ 0.96
CAPN1-211ENST00000527739 FOXD4L4Q8WXT5 416 aaPredicted RBP21.04■□□□□ 0.96
CAPN1-211ENST00000527739 STAMQ92783 540 aa21.04■□□□□ 0.96
CAPN1-211ENST00000527739 USP28Q96RU2 1077 aa21.04■□□□□ 0.96
CAPN1-211ENST00000527739 SMOC2Q9H3U7 446 aa21.04■□□□□ 0.96
CAPN1-211ENST00000527739 CNTN3Q9P232 1028 aa21.04■□□□□ 0.96
CAPN1-211ENST00000527739 ADAM12O43184 909 aa21.03■□□□□ 0.96
CAPN1-211ENST00000527739 C1RP00736 705 aa21.03■□□□□ 0.96
CAPN1-211ENST00000527739 CLTAP09496 248 aa21.03■□□□□ 0.96
CAPN1-211ENST00000527739 CXCL8P10145 99 aa21.03■□□□□ 0.96
CAPN1-211ENST00000527739 NMT1P30419 496 aaKnown RBP21.03■□□□□ 0.96
CAPN1-211ENST00000527739 SPAG1Q07617 926 aa21.03■□□□□ 0.96
CAPN1-211ENST00000527739 SLC10A6Q3KNW5 377 aa21.03■□□□□ 0.96
CAPN1-211ENST00000527739 CD300LGQ6UXG3 332 aa21.03■□□□□ 0.96
CAPN1-211ENST00000527739 CYP26C1Q6V0L0 522 aa21.03■□□□□ 0.96
CAPN1-211ENST00000527739 HSCBQ8IWL3 235 aa21.03■□□□□ 0.96
CAPN1-211ENST00000527739 C3orf58Q8NDZ4 430 aa21.03■□□□□ 0.96
CAPN1-211ENST00000527739 FAM212AQ96EL1 285 aa21.03■□□□□ 0.96
CAPN1-211ENST00000527739 PRKD2Q9BZL6 878 aa21.03■□□□□ 0.96
CAPN1-211ENST00000527739 WDR6Q9NNW5 1121 aaKnown RBP21.03■□□□□ 0.96
CAPN1-211ENST00000527739 ZDHHC7Q9NXF8 308 aa21.03■□□□□ 0.96
CAPN1-211ENST00000527739 POLIQ9UNA4 740 aa21.03■□□□□ 0.96
CAPN1-211ENST00000527739 TULP1O00294 542 aaPredicted RBP21.02■□□□□ 0.96
CAPN1-211ENST00000527739 ZMYND10O75800 440 aa21.02■□□□□ 0.96
CAPN1-211ENST00000527739 RPL9P32969 192 aaKnown RBP21.02■□□□□ 0.96
CAPN1-211ENST00000527739 ZNF131P52739 623 aa21.02■□□□□ 0.96
CAPN1-211ENST00000527739 SLC39A14Q15043 492 aa21.02■□□□□ 0.96
CAPN1-211ENST00000527739 STK38Q15208 465 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms