RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, human

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLNS1A-209	ENST00000527299	SCLT1	Q96NL6	688 aa		4.15	□□□□□ -1.75
CLNS1A-209	ENST00000527299	STK31	Q9BXU1	1019 aa		4.15	□□□□□ -1.75
CLNS1A-209	ENST00000527299	TSGA10	Q9BZW7	698 aa		4.15	□□□□□ -1.75
CLNS1A-209	ENST00000527299	TOR3A	Q9H497	397 aa		4.15	□□□□□ -1.75
CLNS1A-209	ENST00000527299	KIF9	Q9HAQ2	790 aa		4.15	□□□□□ -1.75
CLNS1A-209	ENST00000527299	METTL14	Q9HCE5	456 aa	Known RBP	4.15	□□□□□ -1.75
CLNS1A-209	ENST00000527299	CATSPERZ	Q9NTU4	200 aa		4.15	□□□□□ -1.75
CLNS1A-209	ENST00000527299	PDRG1	Q9NUG6	133 aa		4.15	□□□□□ -1.75
CLNS1A-209	ENST00000527299	HOXC10	Q9NYD6	342 aa		4.15	□□□□□ -1.75
CLNS1A-209	ENST00000527299	TBC1D7	Q9P0N9	293 aa		4.15	□□□□□ -1.75
CLNS1A-209	ENST00000527299	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	4.15	□□□□□ -1.75
CLNS1A-209	ENST00000527299	ITGB1BP2	Q9UKP3	347 aa		4.15	□□□□□ -1.75
CLNS1A-209	ENST00000527299	CBLC	Q9ULV8	474 aa		4.15	□□□□□ -1.75
CLNS1A-209	ENST00000527299	PYCARD	Q9ULZ3	195 aa		4.15	□□□□□ -1.75
CLNS1A-209	ENST00000527299	RABL2B	Q9UNT1	228 aa		4.15	□□□□□ -1.75
CLNS1A-209	ENST00000527299	TRAF6	Q9Y4K3	522 aa		4.15	□□□□□ -1.75
CLNS1A-209	ENST00000527299	HS3ST4	Q9Y661	456 aa		4.15	□□□□□ -1.75
CLNS1A-209	ENST00000527299	CCDC171	Q6TFL3	1326 aa		4.15	□□□□□ -1.75
CLNS1A-209	ENST00000527299	AK9	Q5TCS8	1911 aa		4.15	□□□□□ -1.75
CLNS1A-209	ENST00000527299	GPRASP1	Q5JY77	1395 aa		4.14	□□□□□ -1.75
CLNS1A-209	ENST00000527299	AATK	Q6ZMQ8	1374 aa		4.14	□□□□□ -1.75
CLNS1A-209	ENST00000527299	MAP3K5	Q99683	1374 aa		4.14	□□□□□ -1.75
CLNS1A-209	ENST00000527299	RPAP1	Q9BWH6	1393 aa	Predicted RBP	4.14	□□□□□ -1.75
CLNS1A-209	ENST00000527299	POLR3G	O15318	223 aa	Predicted RBP	4.14	□□□□□ -1.75
CLNS1A-209	ENST00000527299	CREB3	O43889	395 aa		4.14	□□□□□ -1.75
CLNS1A-209	ENST00000527299	ADCY5	O95622	1261 aa		4.14	□□□□□ -1.75
CLNS1A-209	ENST00000527299	ABHD16A	O95870	558 aa		4.14	□□□□□ -1.75
CLNS1A-209	ENST00000527299	TUBB4A	P04350	444 aa		4.14	□□□□□ -1.75
CLNS1A-209	ENST00000527299	ERBB2	P04626	1255 aa		4.14	□□□□□ -1.75
CLNS1A-209	ENST00000527299	MME	P08473	750 aa		4.14	□□□□□ -1.75
CLNS1A-209	ENST00000527299	CCDC159	P0C7I6	412 aa		4.14	□□□□□ -1.75
CLNS1A-209	ENST00000527299	KRT15	P19012	456 aa		4.14	□□□□□ -1.75
CLNS1A-209	ENST00000527299	HOXD10	P28358	340 aa		4.14	□□□□□ -1.75
CLNS1A-209	ENST00000527299	LMAN1	P49257	510 aa		4.14	□□□□□ -1.75
CLNS1A-209	ENST00000527299	CLNS1A	P54105	237 aa	Known RBP	4.14	□□□□□ -1.75
CLNS1A-209	ENST00000527299	ROR2	Q01974	943 aa	Known RBP	4.14	□□□□□ -1.75
CLNS1A-209	ENST00000527299	PABPC4	Q13310	644 aa	Known RBP eCLIP	4.14	□□□□□ -1.75
CLNS1A-209	ENST00000527299	MPP3	Q13368	585 aa		4.14	□□□□□ -1.75
CLNS1A-209	ENST00000527299	SNX1	Q13596	522 aa		4.14	□□□□□ -1.75
CLNS1A-209	ENST00000527299	ELF2	Q15723	593 aa		4.14	□□□□□ -1.75
CLNS1A-209	ENST00000527299	CCDC92	Q53HC0	331 aa	Predicted RBP	4.14	□□□□□ -1.75
CLNS1A-209	ENST00000527299	AKNAD1	Q5T1N1	836 aa		4.14	□□□□□ -1.75
CLNS1A-209	ENST00000527299	STRIP1	Q5VSL9	837 aa		4.14	□□□□□ -1.75
CLNS1A-209	ENST00000527299	YOD1	Q5VVQ6	348 aa	Predicted RBP	4.14	□□□□□ -1.75
CLNS1A-209	ENST00000527299	C1QL3	Q5VWW1	255 aa		4.14	□□□□□ -1.75
CLNS1A-209	ENST00000527299	PAPD7	Q5XG87	772 aa	Known RBP	4.14	□□□□□ -1.75
CLNS1A-209	ENST00000527299	TLDC1	Q6P9B6	456 aa		4.14	□□□□□ -1.75
CLNS1A-209	ENST00000527299	OLFML1	Q6UWY5	402 aa		4.14	□□□□□ -1.75
CLNS1A-209	ENST00000527299	BHLHA9	Q7RTU4	235 aa		4.14	□□□□□ -1.75
CLNS1A-209	ENST00000527299	MAMDC2	Q7Z304	686 aa	Predicted RBP	4.14	□□□□□ -1.75
CLNS1A-209	ENST00000527299	APLF	Q8IW19	511 aa	Predicted RBP	4.14	□□□□□ -1.75
CLNS1A-209	ENST00000527299	CCDC65	Q8IXS2	484 aa		4.14	□□□□□ -1.75
CLNS1A-209	ENST00000527299	AMOTL1	Q8IY63	956 aa		4.14	□□□□□ -1.75
CLNS1A-209	ENST00000527299	CCDC170	Q8IYT3	715 aa		4.14	□□□□□ -1.75
CLNS1A-209	ENST00000527299	C17orf53	Q8N3J3	647 aa	Predicted RBP	4.14	□□□□□ -1.75
CLNS1A-209	ENST00000527299	AFAP1	Q8N556	730 aa		4.14	□□□□□ -1.75
CLNS1A-209	ENST00000527299	SMYD1	Q8NB12	490 aa		4.14	□□□□□ -1.75
CLNS1A-209	ENST00000527299	RSPH1	Q8WYR4	309 aa		4.14	□□□□□ -1.75
CLNS1A-209	ENST00000527299	ARHGAP45	Q92619	1136 aa		4.14	□□□□□ -1.75
CLNS1A-209	ENST00000527299	ZKSCAN4	Q969J2	545 aa	Predicted RBP	4.14	□□□□□ -1.75
CLNS1A-209	ENST00000527299	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	4.14	□□□□□ -1.75
CLNS1A-209	ENST00000527299	ZBTB10	Q96DT7	871 aa		4.14	□□□□□ -1.75
CLNS1A-209	ENST00000527299	ALS2CR12	Q96Q35	445 aa		4.14	□□□□□ -1.75
CLNS1A-209	ENST00000527299	MPHOSPH6	Q99547	160 aa	Known RBP	4.14	□□□□□ -1.75
CLNS1A-209	ENST00000527299	MNT	Q99583	582 aa		4.14	□□□□□ -1.75
CLNS1A-209	ENST00000527299	JPH2	Q9BR39	696 aa	Predicted RBP	4.14	□□□□□ -1.75
CLNS1A-209	ENST00000527299	MAK16	Q9BXY0	300 aa	Known RBP	4.14	□□□□□ -1.75
CLNS1A-209	ENST00000527299	ATP6V0A4	Q9HBG4	840 aa		4.14	□□□□□ -1.75
CLNS1A-209	ENST00000527299	ADAM21	Q9UKJ8	722 aa		4.14	□□□□□ -1.75
CLNS1A-209	ENST00000527299	ZNF215	Q9UL58	517 aa	Predicted RBP	4.14	□□□□□ -1.75
CLNS1A-209	ENST00000527299	ITM2B	Q9Y287	266 aa		4.14	□□□□□ -1.75
CLNS1A-209	ENST00000527299	COMMD10	Q9Y6G5	202 aa		4.14	□□□□□ -1.75
CLNS1A-209	ENST00000527299	SETD1B	Q9UPS6	1966 aa	Known RBP	4.14	□□□□□ -1.75
CLNS1A-209	ENST00000527299	EVC2	Q86UK5	1308 aa		4.14	□□□□□ -1.75
CLNS1A-209	ENST00000527299	BLM	P54132	1417 aa	Predicted RBP	4.13	□□□□□ -1.75
CLNS1A-209	ENST00000527299	GAPVD1	Q14C86	1478 aa		4.13	□□□□□ -1.75
CLNS1A-209	ENST00000527299	TRAV20	A0A0B4J274	112 aa		4.13	□□□□□ -1.75
CLNS1A-209	ENST00000527299	C2orf78	A6NCI8	922 aa		4.13	□□□□□ -1.75
CLNS1A-209	ENST00000527299	AQP7	O14520	342 aa		4.13	□□□□□ -1.75
CLNS1A-209	ENST00000527299	LIN7A	O14910	233 aa	Predicted RBP	4.13	□□□□□ -1.75
CLNS1A-209	ENST00000527299	B3GALT2	O43825	422 aa		4.13	□□□□□ -1.75
CLNS1A-209	ENST00000527299	ATP6V1G1	O75348	118 aa		4.13	□□□□□ -1.75
CLNS1A-209	ENST00000527299	FER	P16591	822 aa		4.13	□□□□□ -1.75
CLNS1A-209	ENST00000527299	ITGB6	P18564	788 aa		4.13	□□□□□ -1.75
CLNS1A-209	ENST00000527299	BDNF	P23560	247 aa		4.13	□□□□□ -1.75
CLNS1A-209	ENST00000527299	RANBP1	P43487	201 aa		4.13	□□□□□ -1.75
CLNS1A-209	ENST00000527299	SESN2	P58004	480 aa	Predicted RBP	4.13	□□□□□ -1.75
CLNS1A-209	ENST00000527299	SMC1A	Q14683	1233 aa	Known RBP	4.13	□□□□□ -1.75
CLNS1A-209	ENST00000527299	CRY1	Q16526	586 aa		4.13	□□□□□ -1.75
CLNS1A-209	ENST00000527299	LRRC23	Q53EV4	343 aa	Predicted RBP	4.13	□□□□□ -1.75
CLNS1A-209	ENST00000527299	HECTD2	Q5U5R9	776 aa		4.13	□□□□□ -1.75
CLNS1A-209	ENST00000527299	CCDC70	Q6NSX1	233 aa		4.13	□□□□□ -1.75
CLNS1A-209	ENST00000527299	KLHDC10	Q6PID8	442 aa		4.13	□□□□□ -1.75
CLNS1A-209	ENST00000527299	MTHFD1L	Q6UB35	978 aa		4.13	□□□□□ -1.75
CLNS1A-209	ENST00000527299	LRRC55	Q6ZSA7	311 aa		4.13	□□□□□ -1.75
CLNS1A-209	ENST00000527299	SEPT14	Q6ZU15	432 aa		4.13	□□□□□ -1.75
CLNS1A-209	ENST00000527299	ARMC9	Q7Z3E5	817 aa		4.13	□□□□□ -1.75
CLNS1A-209	ENST00000527299	LRRC49	Q8IUZ0	686 aa		4.13	□□□□□ -1.75
CLNS1A-209	ENST00000527299	CCDC50	Q8IVM0	306 aa		4.13	□□□□□ -1.75
CLNS1A-209	ENST00000527299	CELF2-AS1	Q8N7Q2	184 aa		4.13	□□□□□ -1.75

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