RNA–Protein interactions for RNA: ENST00000525878.5

CSDE1-210, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-210ENST00000525878 RNPEPQ9H4A4 650 aa5.82□□□□□ -1.48
CSDE1-210ENST00000525878 GREM2Q9H772 168 aa5.82□□□□□ -1.48
CSDE1-210ENST00000525878 SEMA4GQ9NTN9 838 aa5.82□□□□□ -1.48
CSDE1-210ENST00000525878 SIK3Q9Y2K2 1263 aa5.82□□□□□ -1.48
CSDE1-210ENST00000525878 NOX1Q9Y5S8 564 aa5.82□□□□□ -1.48
CSDE1-210ENST00000525878 MGST3O14880 152 aa5.81□□□□□ -1.48
CSDE1-210ENST00000525878 C1QL1O75973 258 aa5.81□□□□□ -1.48
CSDE1-210ENST00000525878 C1RP00736 705 aa5.81□□□□□ -1.48
CSDE1-210ENST00000525878 IL2RBP14784 551 aa5.81□□□□□ -1.48
CSDE1-210ENST00000525878 FGFR4P22455 802 aa5.81□□□□□ -1.48
CSDE1-210ENST00000525878 ANO4Q32M45 955 aa5.81□□□□□ -1.48
CSDE1-210ENST00000525878 HDGFL2Q7Z4V5 671 aaPredicted RBP5.81□□□□□ -1.48
CSDE1-210ENST00000525878 THNSL2Q86YJ6 484 aa5.81□□□□□ -1.48
CSDE1-210ENST00000525878 CMIPQ8IY22 773 aa5.81□□□□□ -1.48
CSDE1-210ENST00000525878 FBXO18Q8NFZ0 1043 aa5.81□□□□□ -1.48
CSDE1-210ENST00000525878 PDLIM2Q96JY6 352 aa5.81□□□□□ -1.48
CSDE1-210ENST00000525878 REXO4Q9GZR2 422 aaKnown RBP5.81□□□□□ -1.48
CSDE1-210ENST00000525878 WDR26Q9H7D7 661 aa5.81□□□□□ -1.48
CSDE1-210ENST00000525878 IFT122Q9HBG6 1241 aa5.81□□□□□ -1.48
CSDE1-210ENST00000525878 GALNT9Q9HCQ5 603 aa5.81□□□□□ -1.48
CSDE1-210ENST00000525878 RBM12Q9NTZ6 932 aaKnown RBP5.81□□□□□ -1.48
CSDE1-210ENST00000525878 MOCS1Q9NZB8 636 aa5.81□□□□□ -1.48
CSDE1-210ENST00000525878 TESQ9UGI8 421 aaKnown RBP5.81□□□□□ -1.48
CSDE1-210ENST00000525878 KCNE5Q9UJ90 142 aa5.81□□□□□ -1.48
CSDE1-210ENST00000525878 APOBEC2Q9Y235 224 aaKnown RBP5.81□□□□□ -1.48
CSDE1-210ENST00000525878 FRMD4BQ9Y2L6 1034 aa5.81□□□□□ -1.48
CSDE1-210ENST00000525878 PRSS23O95084 383 aa5.8□□□□□ -1.48
CSDE1-210ENST00000525878 MATN4O95460 622 aa5.8□□□□□ -1.48
CSDE1-210ENST00000525878 POMCP01189 267 aa5.8□□□□□ -1.48
CSDE1-210ENST00000525878 CYP2A13Q16696 494 aa5.8□□□□□ -1.48
CSDE1-210ENST00000525878 FAM180AQ6UWF9 173 aa5.8□□□□□ -1.48
CSDE1-210ENST00000525878 DDX46Q7L014 1031 aaKnown RBP5.8□□□□□ -1.48
CSDE1-210ENST00000525878 PQLC1Q8N2U9 271 aa5.8□□□□□ -1.48
CSDE1-210ENST00000525878 CASKIN2Q8WXE0 1202 aa5.8□□□□□ -1.48
CSDE1-210ENST00000525878 SPATA5L1Q9BVQ7 753 aa5.8□□□□□ -1.48
CSDE1-210ENST00000525878 TBCCD1Q9NVR7 557 aa5.8□□□□□ -1.48
CSDE1-210ENST00000525878 SLC23A1Q9UHI7 598 aa5.8□□□□□ -1.48
CSDE1-210ENST00000525878 RBMXL2O75526 392 aaKnown RBP5.79□□□□□ -1.48
CSDE1-210ENST00000525878 CDK4P11802 303 aa5.79□□□□□ -1.48
CSDE1-210ENST00000525878 MTHFD2P13995 350 aa5.79□□□□□ -1.48
CSDE1-210ENST00000525878 ATP5JP18859 108 aa5.79□□□□□ -1.48
CSDE1-210ENST00000525878 ALDH1A3P47895 512 aa5.79□□□□□ -1.48
CSDE1-210ENST00000525878 CACNA2D1P54289 1103 aa5.79□□□□□ -1.48
CSDE1-210ENST00000525878 CCT2P78371 535 aaKnown RBP5.79□□□□□ -1.48
CSDE1-210ENST00000525878 MUM1L1Q5H9M0 696 aa5.79□□□□□ -1.48
CSDE1-210ENST00000525878 SEM1Q6ZVN7 128 aa5.79□□□□□ -1.48
CSDE1-210ENST00000525878 STRA8Q7Z7C7 330 aa5.79□□□□□ -1.48
CSDE1-210ENST00000525878 LANCL2Q9NS86 450 aa5.79□□□□□ -1.48
CSDE1-210ENST00000525878 FBXO34Q9NWN3 711 aa5.79□□□□□ -1.48
CSDE1-210ENST00000525878 MYADML2A6NDP7 307 aa5.78□□□□□ -1.48
CSDE1-210ENST00000525878 RAP2AP10114 183 aa5.78□□□□□ -1.48
CSDE1-210ENST00000525878 FPR1P21462 350 aa5.78□□□□□ -1.48
CSDE1-210ENST00000525878 SLC6A2P23975 617 aa5.78□□□□□ -1.48
CSDE1-210ENST00000525878 MCAMP43121 646 aa5.78□□□□□ -1.48
CSDE1-210ENST00000525878 HSD11B2P80365 405 aa5.78□□□□□ -1.48
CSDE1-210ENST00000525878 FOXF2Q12947 444 aa5.78□□□□□ -1.48
CSDE1-210ENST00000525878 GLCCI1Q86VQ1 547 aa5.78□□□□□ -1.48
CSDE1-210ENST00000525878 LNX2Q8N448 690 aa5.78□□□□□ -1.48
CSDE1-210ENST00000525878 STON2Q8WXE9 905 aa5.78□□□□□ -1.48
CSDE1-210ENST00000525878 ANKS1AQ92625 1134 aa5.78□□□□□ -1.48
CSDE1-210ENST00000525878 RNF31Q96EP0 1072 aa5.78□□□□□ -1.48
CSDE1-210ENST00000525878 NAF1Q96HR8 494 aaKnown RBP5.78□□□□□ -1.48
CSDE1-210ENST00000525878 UHRF1Q96T88 793 aaPredicted RBP5.78□□□□□ -1.48
CSDE1-210ENST00000525878 QRSL1Q9H0R6 528 aaKnown RBP5.78□□□□□ -1.48
CSDE1-210ENST00000525878 UNKLQ9H9P5 680 aaKnown RBP5.78□□□□□ -1.48
CSDE1-210ENST00000525878 AATKQ6ZMQ8 1374 aa5.78□□□□□ -1.48
CSDE1-210ENST00000525878 GOLGA8AA7E2F4 631 aa5.77□□□□□ -1.49
CSDE1-210ENST00000525878 GPANK1O95872 356 aa5.77□□□□□ -1.49
CSDE1-210ENST00000525878 CKBP12277 381 aa5.77□□□□□ -1.49
CSDE1-210ENST00000525878 SLC6A9P48067 706 aa5.77□□□□□ -1.49
CSDE1-210ENST00000525878 VAV2P52735 878 aa5.77□□□□□ -1.49
CSDE1-210ENST00000525878 GYS2P54840 703 aa5.77□□□□□ -1.49
CSDE1-210ENST00000525878 MALLQ13021 153 aa5.77□□□□□ -1.49
CSDE1-210ENST00000525878 ZNF529Q6P280 563 aa5.77□□□□□ -1.49
CSDE1-210ENST00000525878 TGFBRAP1Q8WUH2 860 aa5.77□□□□□ -1.49
CSDE1-210ENST00000525878 MYOCQ99972 504 aa5.77□□□□□ -1.49
CSDE1-210ENST00000525878 AIFM2Q9BRQ8 373 aa5.77□□□□□ -1.49
CSDE1-210ENST00000525878 ACE2Q9BYF1 805 aaPredicted RBP5.77□□□□□ -1.49
CSDE1-210ENST00000525878 SENP6Q9GZR1 1112 aaPredicted RBP5.77□□□□□ -1.49
CSDE1-210ENST00000525878 VTA1Q9NP79 307 aa5.77□□□□□ -1.49
CSDE1-210ENST00000525878 DMRT3Q9NQL9 472 aa5.77□□□□□ -1.49
CSDE1-210ENST00000525878 USP25Q9UHP3 1055 aa5.77□□□□□ -1.49
CSDE1-210ENST00000525878 COL3A1P02461 1466 aaPredicted RBP5.77□□□□□ -1.49
CSDE1-210ENST00000525878 PROP1O75360 226 aa5.76□□□□□ -1.49
CSDE1-210ENST00000525878 ENDOD1O94919 500 aa5.76□□□□□ -1.49
CSDE1-210ENST00000525878 ZFPL1O95159 310 aa5.76□□□□□ -1.49
CSDE1-210ENST00000525878 PCSK1P29120 753 aa5.76□□□□□ -1.49
CSDE1-210ENST00000525878 PER3P56645 1201 aa5.76□□□□□ -1.49
CSDE1-210ENST00000525878 MRPS35P82673 323 aaKnown RBP5.76□□□□□ -1.49
CSDE1-210ENST00000525878 MGAT2Q10469 447 aa5.76□□□□□ -1.49
CSDE1-210ENST00000525878 STRN3Q13033 797 aa5.76□□□□□ -1.49
CSDE1-210ENST00000525878 SEPT2Q15019 361 aa5.76□□□□□ -1.49
CSDE1-210ENST00000525878 PAPD7Q5XG87 772 aaKnown RBP5.76□□□□□ -1.49
CSDE1-210ENST00000525878 SRRM1Q8IYB3 904 aaKnown RBP5.76□□□□□ -1.49
CSDE1-210ENST00000525878 KIAA1586Q9HCI6 787 aa5.76□□□□□ -1.49
CSDE1-210ENST00000525878 CASS4Q9NQ75 786 aa5.76□□□□□ -1.49
CSDE1-210ENST00000525878 KCTD5Q9NXV2 234 aa5.76□□□□□ -1.49
CSDE1-210ENST00000525878 AJAP1Q9UKB5 411 aaPredicted RBP5.76□□□□□ -1.49
CSDE1-210ENST00000525878 LRRC3CA6NJW4 275 aa5.75□□□□□ -1.49
CSDE1-210ENST00000525878 ERN1O75460 977 aaKnown RBP5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms