RNA–Protein interactions for RNA: ENST00000525821.1

CTNND1-211, Transcript of catenin delta 1, humanhuman

TSL 3

Gene CTNND1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-211ENST00000525821 SLC9A1P19634 815 aa7.94□□□□□ -1.14
CTNND1-211ENST00000525821 APEX1P27695 318 aaKnown RBP7.94□□□□□ -1.14
CTNND1-211ENST00000525821 EIF4A1P60842 406 aaKnown RBP7.94□□□□□ -1.14
CTNND1-211ENST00000525821 PCBP1Q15365 356 aaKnown RBP eCLIP7.94□□□□□ -1.14
CTNND1-211ENST00000525821 PROSER3Q2NL68 480 aa7.94□□□□□ -1.14
CTNND1-211ENST00000525821 CREB3L3Q68CJ9 461 aa7.94□□□□□ -1.14
CTNND1-211ENST00000525821 GRAMD4Q6IC98 578 aa7.94□□□□□ -1.14
CTNND1-211ENST00000525821 GIMAP6Q6P9H5 292 aa7.94□□□□□ -1.14
CTNND1-211ENST00000525821 LIMS2Q7Z4I7 341 aa7.94□□□□□ -1.14
CTNND1-211ENST00000525821 PRRT2Q7Z6L0 340 aaPredicted RBP7.94□□□□□ -1.14
CTNND1-211ENST00000525821 NXPE1Q8N323 547 aa7.94□□□□□ -1.14
CTNND1-211ENST00000525821 PPM1KQ8N3J5 372 aa7.94□□□□□ -1.14
CTNND1-211ENST00000525821 ELF4Q99607 663 aaPredicted RBP7.94□□□□□ -1.14
CTNND1-211ENST00000525821 MXD3Q9BW11 206 aa7.94□□□□□ -1.14
CTNND1-211ENST00000525821 TARS2Q9BW92 718 aaKnown RBP7.94□□□□□ -1.14
CTNND1-211ENST00000525821 SEC61A2Q9H9S3 476 aa7.94□□□□□ -1.14
CTNND1-211ENST00000525821 Q9UFV3 132 aa7.94□□□□□ -1.14
CTNND1-211ENST00000525821 CDC42EP3Q9UKI2 254 aa7.94□□□□□ -1.14
CTNND1-211ENST00000525821 SIPA1L3O60292 1781 aaPredicted RBP7.94□□□□□ -1.14
CTNND1-211ENST00000525821 PTX3P26022 381 aaPredicted RBP7.93□□□□□ -1.14
CTNND1-211ENST00000525821 DSG1Q02413 1049 aa7.93□□□□□ -1.14
CTNND1-211ENST00000525821 EFEMP1Q12805 493 aa7.93□□□□□ -1.14
CTNND1-211ENST00000525821 AIMP1Q12904 312 aaKnown RBP7.93□□□□□ -1.14
CTNND1-211ENST00000525821 TCIRG1Q13488 830 aa7.93□□□□□ -1.14
CTNND1-211ENST00000525821 EPHA7Q15375 998 aa7.93□□□□□ -1.14
CTNND1-211ENST00000525821 SLC4A8Q2Y0W8 1093 aa7.93□□□□□ -1.14
CTNND1-211ENST00000525821 ZNF568Q3ZCX4 644 aa7.93□□□□□ -1.14
CTNND1-211ENST00000525821 SPATS1Q496A3 300 aa7.93□□□□□ -1.14
CTNND1-211ENST00000525821 ZMAT1Q5H9K5 638 aa7.93□□□□□ -1.14
CTNND1-211ENST00000525821 SLFN13Q68D06 897 aa7.93□□□□□ -1.14
CTNND1-211ENST00000525821 TMEM200BQ69YZ2 307 aa7.93□□□□□ -1.14
CTNND1-211ENST00000525821 ZNF333Q96JL9 665 aa7.93□□□□□ -1.14
CTNND1-211ENST00000525821 EYA3Q99504 573 aa7.93□□□□□ -1.14
CTNND1-211ENST00000525821 PTPN18Q99952 460 aa7.93□□□□□ -1.14
CTNND1-211ENST00000525821 SPO11Q9Y5K1 396 aa7.93□□□□□ -1.14
CTNND1-211ENST00000525821 CUL9Q8IWT3 2517 aa7.92□□□□□ -1.14
CTNND1-211ENST00000525821 UBA6A0AVT1 1052 aaPredicted RBP7.92□□□□□ -1.14
CTNND1-211ENST00000525821 MAFO75444 373 aaPredicted RBP7.92□□□□□ -1.14
CTNND1-211ENST00000525821 UFL1O94874 794 aa7.92□□□□□ -1.14
CTNND1-211ENST00000525821 PRLP01236 227 aa7.92□□□□□ -1.14
CTNND1-211ENST00000525821 U2AF1L5P0DN76 240 aaPredicted RBP7.92□□□□□ -1.14
CTNND1-211ENST00000525821 EIF2S2P20042 333 aaKnown RBP7.92□□□□□ -1.14
CTNND1-211ENST00000525821 RRADP55042 308 aa7.92□□□□□ -1.14
CTNND1-211ENST00000525821 U2AF1Q01081 240 aaKnown RBP eCLIP7.92□□□□□ -1.14
CTNND1-211ENST00000525821 SLC6A3Q01959 620 aa7.92□□□□□ -1.14
CTNND1-211ENST00000525821 ROM1Q03395 351 aa7.92□□□□□ -1.14
CTNND1-211ENST00000525821 CRHR2Q13324 411 aa7.92□□□□□ -1.14
CTNND1-211ENST00000525821 TTC38Q5R3I4 469 aa7.92□□□□□ -1.14
CTNND1-211ENST00000525821 TRIM68Q6AZZ1 485 aa7.92□□□□□ -1.14
CTNND1-211ENST00000525821 LARP4Q71RC2 724 aaKnown RBP eCLIP7.92□□□□□ -1.14
CTNND1-211ENST00000525821 ERO1AQ96HE7 468 aa7.92□□□□□ -1.14
CTNND1-211ENST00000525821 MAML3Q96JK9 1138 aa7.92□□□□□ -1.14
CTNND1-211ENST00000525821 CLMNQ96JQ2 1002 aa7.92□□□□□ -1.14
CTNND1-211ENST00000525821 SAMD11Q96NU1 681 aa7.92□□□□□ -1.14
CTNND1-211ENST00000525821 TOMM22Q9NS69 142 aa7.92□□□□□ -1.14
CTNND1-211ENST00000525821 H2AFY2Q9P0M6 372 aaPredicted RBP7.92□□□□□ -1.14
CTNND1-211ENST00000525821 TMA7Q9Y2S6 64 aaKnown RBP7.92□□□□□ -1.14
CTNND1-211ENST00000525821 SH3TC1Q8TE82 1336 aa7.92□□□□□ -1.14
CTNND1-211ENST00000525821 PAPPA2Q9BXP8 1791 aa7.92□□□□□ -1.14
CTNND1-211ENST00000525821 ZNF891A8MT65 544 aaPredicted RBP7.91□□□□□ -1.14
CTNND1-211ENST00000525821 NF2P35240 595 aa7.91□□□□□ -1.14
CTNND1-211ENST00000525821 RGS3P49796 1198 aa7.91□□□□□ -1.14
CTNND1-211ENST00000525821 SCNN1BP51168 640 aa7.91□□□□□ -1.14
CTNND1-211ENST00000525821 ADCY1Q08828 1119 aa7.91□□□□□ -1.14
CTNND1-211ENST00000525821 MAP3K12Q12852 859 aa7.91□□□□□ -1.14
CTNND1-211ENST00000525821 SLC9C1Q4G0N8 1177 aa7.91□□□□□ -1.14
CTNND1-211ENST00000525821 ARMC9Q7Z3E5 817 aa7.91□□□□□ -1.14
CTNND1-211ENST00000525821 AGBL3Q8NEM8 1001 aa7.91□□□□□ -1.14
CTNND1-211ENST00000525821 CHTF18Q8WVB6 975 aa7.91□□□□□ -1.14
CTNND1-211ENST00000525821 FAM89AQ96GI7 184 aa7.91□□□□□ -1.14
CTNND1-211ENST00000525821 LOXL4Q96JB6 756 aa7.91□□□□□ -1.14
CTNND1-211ENST00000525821 THG1LQ9NWX6 298 aaKnown RBP7.91□□□□□ -1.14
CTNND1-211ENST00000525821 COL4A1P02462 1669 aa7.91□□□□□ -1.14
CTNND1-211ENST00000525821 AKAP11Q9UKA4 1901 aa7.91□□□□□ -1.14
CTNND1-211ENST00000525821 ZNF609O15014 1411 aa7.9□□□□□ -1.14
CTNND1-211ENST00000525821 MANSC4A6NHS7 340 aaPredicted RBP7.9□□□□□ -1.14
CTNND1-211ENST00000525821 GYS2P54840 703 aa7.9□□□□□ -1.14
CTNND1-211ENST00000525821 SP3Q02447 781 aa7.9□□□□□ -1.14
CTNND1-211ENST00000525821 TAF7LQ5H9L4 462 aa7.9□□□□□ -1.14
CTNND1-211ENST00000525821 SLFN12LQ6IEE8 588 aa7.9□□□□□ -1.14
CTNND1-211ENST00000525821 COPS6Q7L5N1 327 aa7.9□□□□□ -1.14
CTNND1-211ENST00000525821 CIR1Q86X95 450 aaPredicted RBP7.9□□□□□ -1.14
CTNND1-211ENST00000525821 TUBGCP5Q96RT8 1024 aa7.9□□□□□ -1.14
CTNND1-211ENST00000525821 LMF1Q96S06 567 aa7.9□□□□□ -1.14
CTNND1-211ENST00000525821 MEGF9Q9H1U4 602 aa7.9□□□□□ -1.14
CTNND1-211ENST00000525821 SMPD4Q9NXE4 827 aa7.9□□□□□ -1.14
CTNND1-211ENST00000525821 A0A087X0B3 334 aa7.89□□□□□ -1.15
CTNND1-211ENST00000525821 GSG1L2A8MUP6 293 aa7.89□□□□□ -1.15
CTNND1-211ENST00000525821 WNT10BO00744 389 aa7.89□□□□□ -1.15
CTNND1-211ENST00000525821 GPR42O15529 346 aa7.89□□□□□ -1.15
CTNND1-211ENST00000525821 HTATSF1O43719 755 aaKnown RBP7.89□□□□□ -1.15
CTNND1-211ENST00000525821 MYCLP1P12525 358 aaPredicted RBP7.89□□□□□ -1.15
CTNND1-211ENST00000525821 HSD3B2P26439 372 aa7.89□□□□□ -1.15
CTNND1-211ENST00000525821 MEOX1P50221 254 aa7.89□□□□□ -1.15
CTNND1-211ENST00000525821 RPS8P62241 208 aaKnown RBP7.89□□□□□ -1.15
CTNND1-211ENST00000525821 NOLC1Q14978 699 aaKnown RBP eCLIP7.89□□□□□ -1.15
CTNND1-211ENST00000525821 SART3Q15020 963 aaKnown RBP7.89□□□□□ -1.15
CTNND1-211ENST00000525821 PCOLCEQ15113 449 aa7.89□□□□□ -1.15
CTNND1-211ENST00000525821 SEPT7Q16181 437 aaKnown RBP7.89□□□□□ -1.15
CTNND1-211ENST00000525821 RNF151Q2KHN1 245 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms