RNA–Protein interactions for RNA: ENST00000525167.1

TSKU-202, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

TSL 4

Gene TSKU, Length 542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-202ENST00000525167 PDIA5Q14554 519 aa18.84■□□□□ 0.61
TSKU-202ENST00000525167 MLF2Q15773 248 aaPredicted RBP18.84■□□□□ 0.61
TSKU-202ENST00000525167 XKR4Q5GH76 650 aa18.84■□□□□ 0.61
TSKU-202ENST00000525167 NT5DC1Q5TFE4 455 aa18.84■□□□□ 0.61
TSKU-202ENST00000525167 FBXO18Q8NFZ0 1043 aa18.84■□□□□ 0.61
TSKU-202ENST00000525167 ITFG1Q8TB96 612 aa18.84■□□□□ 0.61
TSKU-202ENST00000525167 DDX27Q96GQ7 796 aaKnown RBP18.84■□□□□ 0.61
TSKU-202ENST00000525167 RPP25Q9BUL9 199 aaKnown RBP18.84■□□□□ 0.61
TSKU-202ENST00000525167 KIFC3Q9BVG8 833 aa18.84■□□□□ 0.61
TSKU-202ENST00000525167 RAB34Q9BZG1 259 aa18.84■□□□□ 0.61
TSKU-202ENST00000525167 AVENQ9NQS1 362 aaPredicted RBP18.84■□□□□ 0.61
TSKU-202ENST00000525167 SLC38A7Q9NVC3 462 aa18.84■□□□□ 0.61
TSKU-202ENST00000525167 GDE1Q9NZC3 331 aa18.84■□□□□ 0.61
TSKU-202ENST00000525167 LRWD1Q9UFC0 647 aa18.84■□□□□ 0.61
TSKU-202ENST00000525167 USP20Q9Y2K6 914 aa18.84■□□□□ 0.61
TSKU-202ENST00000525167 CDY1Q9Y6F8 540 aa18.84■□□□□ 0.61
TSKU-202ENST00000525167 MYH15Q9Y2K3 1946 aa18.83■□□□□ 0.6
TSKU-202ENST00000525167 HMGN5P82970 282 aaKnown RBP18.83■□□□□ 0.6
TSKU-202ENST00000525167 ZNF528Q3MIS6 628 aa18.83■□□□□ 0.6
TSKU-202ENST00000525167 GLRA4Q5JXX5 417 aa18.83■□□□□ 0.6
TSKU-202ENST00000525167 SLC8B1Q6J4K2 584 aa18.83■□□□□ 0.6
TSKU-202ENST00000525167 NPAS3Q8IXF0 933 aa18.83■□□□□ 0.6
TSKU-202ENST00000525167 CCDC94Q9BW85 323 aaPredicted RBP18.83■□□□□ 0.6
TSKU-202ENST00000525167 BCO2Q9BYV7 579 aa18.83■□□□□ 0.6
TSKU-202ENST00000525167 FOXQ1Q9C009 403 aa18.83■□□□□ 0.6
TSKU-202ENST00000525167 TMEM134Q9H6X4 195 aa18.83■□□□□ 0.6
TSKU-202ENST00000525167 DNMT3BQ9UBC3 853 aaKnown RBP18.83■□□□□ 0.6
TSKU-202ENST00000525167 NOL7Q9UMY1 257 aaKnown RBP18.83■□□□□ 0.6
TSKU-202ENST00000525167 R4GN57 208 aa18.83■□□□□ 0.6
TSKU-202ENST00000525167 DCHS1Q96JQ0 3298 aa18.83■□□□□ 0.6
TSKU-202ENST00000525167 SMIM28A0A1B0GU29 152 aa18.82■□□□□ 0.6
TSKU-202ENST00000525167 ECI2O75521 394 aa18.82■□□□□ 0.6
TSKU-202ENST00000525167 TKTP29401 623 aaKnown RBP18.82■□□□□ 0.6
TSKU-202ENST00000525167 ECM1Q16610 540 aa18.82■□□□□ 0.6
TSKU-202ENST00000525167 SLC44A4Q53GD3 710 aa18.82■□□□□ 0.6
TSKU-202ENST00000525167 CD300LGQ6UXG3 332 aa18.82■□□□□ 0.6
TSKU-202ENST00000525167 ALKAL1Q6UXT8 129 aa18.82■□□□□ 0.6
TSKU-202ENST00000525167 C4orf32Q8N8J7 132 aa18.82■□□□□ 0.6
TSKU-202ENST00000525167 IGSF22Q8N9C0 903 aa18.82■□□□□ 0.6
TSKU-202ENST00000525167 ZNF461Q8TAF7 563 aa18.82■□□□□ 0.6
TSKU-202ENST00000525167 ACO2Q99798 780 aaKnown RBP18.82■□□□□ 0.6
TSKU-202ENST00000525167 C17orf75Q9HAS0 396 aa18.82■□□□□ 0.6
TSKU-202ENST00000525167 FBXO4Q9UKT5 387 aa18.82■□□□□ 0.6
TSKU-202ENST00000525167 KIAA1024Q9UPX6 916 aa18.82■□□□□ 0.6
TSKU-202ENST00000525167 ARHGEF37A1IGU5 675 aa18.81■□□□□ 0.6
TSKU-202ENST00000525167 GLULP15104 373 aa18.81■□□□□ 0.6
TSKU-202ENST00000525167 NPTX2P47972 431 aa18.81■□□□□ 0.6
TSKU-202ENST00000525167 DMP1Q13316 513 aaPredicted RBP18.81■□□□□ 0.6
TSKU-202ENST00000525167 SNW1Q13573 536 aaKnown RBP18.81■□□□□ 0.6
TSKU-202ENST00000525167 GNL2Q13823 731 aaKnown RBP18.81■□□□□ 0.6
TSKU-202ENST00000525167 ZNF568Q3ZCX4 644 aa18.81■□□□□ 0.6
TSKU-202ENST00000525167 DRC1Q96MC2 740 aa18.81■□□□□ 0.6
TSKU-202ENST00000525167 MRPL4Q9BYD3 311 aaKnown RBP18.81■□□□□ 0.6
TSKU-202ENST00000525167 CDT1Q9H211 546 aa18.81■□□□□ 0.6
TSKU-202ENST00000525167 PTPRHQ9HD43 1115 aa18.81■□□□□ 0.6
TSKU-202ENST00000525167 DDX19AQ9NUU7 478 aaKnown RBP18.81■□□□□ 0.6
TSKU-202ENST00000525167 HCFC1R1Q9NWW0 138 aa18.81■□□□□ 0.6
TSKU-202ENST00000525167 MRPS23Q9Y3D9 190 aaKnown RBP18.81■□□□□ 0.6
TSKU-202ENST00000525167 RBM19Q9Y4C8 960 aaKnown RBP18.81■□□□□ 0.6
TSKU-202ENST00000525167 WDR87Q6ZQQ6 2873 aa18.81■□□□□ 0.6
TSKU-202ENST00000525167 LAD1O00515 517 aa18.8■□□□□ 0.6
TSKU-202ENST00000525167 SYN3O14994 580 aa18.8■□□□□ 0.6
TSKU-202ENST00000525167 ABLIM3O94929 683 aa18.8■□□□□ 0.6
TSKU-202ENST00000525167 RHOP08100 348 aa18.8■□□□□ 0.6
TSKU-202ENST00000525167 MCF2P10911 925 aa18.8■□□□□ 0.6
TSKU-202ENST00000525167 KCNE1P15382 129 aa18.8■□□□□ 0.6
TSKU-202ENST00000525167 CCDC83Q8IWF9 413 aa18.8■□□□□ 0.6
TSKU-202ENST00000525167 C3orf58Q8NDZ4 430 aa18.8■□□□□ 0.6
TSKU-202ENST00000525167 ST13P5Q8NFI4 369 aaPredicted RBP18.8■□□□□ 0.6
TSKU-202ENST00000525167 SNX29Q8TEQ0 813 aa18.8■□□□□ 0.6
TSKU-202ENST00000525167 RUBCNQ92622 972 aa18.8■□□□□ 0.6
TSKU-202ENST00000525167 NELL2Q99435 816 aa18.8■□□□□ 0.6
TSKU-202ENST00000525167 KXD1Q9BQD3 176 aa18.8■□□□□ 0.6
TSKU-202ENST00000525167 TIPINQ9BVW5 301 aa18.8■□□□□ 0.6
TSKU-202ENST00000525167 GOLGA2P5Q9HBQ8 144 aa18.8■□□□□ 0.6
TSKU-202ENST00000525167 ARHGAP28Q9P2N2 729 aa18.8■□□□□ 0.6
TSKU-202ENST00000525167 DNM3Q9UQ16 869 aa18.8■□□□□ 0.6
TSKU-202ENST00000525167 FANCMQ8IYD8 2048 aa18.79■□□□□ 0.6
TSKU-202ENST00000525167 DOCK6Q96HP0 2047 aa18.79■□□□□ 0.6
TSKU-202ENST00000525167 MIA3Q5JRA6 1907 aa18.79■□□□□ 0.6
TSKU-202ENST00000525167 CCDC169A6NNP5 214 aa18.79■□□□□ 0.6
TSKU-202ENST00000525167 H7C4K7 107 aa18.79■□□□□ 0.6
TSKU-202ENST00000525167 MICAL2O94851 1124 aa18.79■□□□□ 0.6
TSKU-202ENST00000525167 LRG1P02750 347 aa18.79■□□□□ 0.6
TSKU-202ENST00000525167 PTPN2P17706 415 aa18.79■□□□□ 0.6
TSKU-202ENST00000525167 PROZP22891 400 aa18.79■□□□□ 0.6
TSKU-202ENST00000525167 U2AF2P26368 475 aaKnown RBP eCLIP18.79■□□□□ 0.6
TSKU-202ENST00000525167 ELF1P32519 619 aa18.79■□□□□ 0.6
TSKU-202ENST00000525167 RPL9P32969 192 aaKnown RBP18.79■□□□□ 0.6
TSKU-202ENST00000525167 PEX3P56589 373 aa18.79■□□□□ 0.6
TSKU-202ENST00000525167 ROR1Q01973 937 aa18.79■□□□□ 0.6
TSKU-202ENST00000525167 VARS2Q5ST30 1063 aaKnown RBP18.79■□□□□ 0.6
TSKU-202ENST00000525167 MAML2Q8IZL2 1156 aaPredicted RBP18.79■□□□□ 0.6
TSKU-202ENST00000525167 FAM184AQ8NB25 1140 aa18.79■□□□□ 0.6
TSKU-202ENST00000525167 ZSCAN31Q96LW9 406 aaPredicted RBP18.79■□□□□ 0.6
TSKU-202ENST00000525167 LTB4R2Q9NPC1 389 aa18.79■□□□□ 0.6
TSKU-202ENST00000525167 PPP4R2Q9NY27 417 aa18.79■□□□□ 0.6
TSKU-202ENST00000525167 CNTN3Q9P232 1028 aa18.79■□□□□ 0.6
TSKU-202ENST00000525167 KCNG1Q9UIX4 513 aa18.79■□□□□ 0.6
TSKU-202ENST00000525167 MAFFQ9ULX9 164 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms