RNA–Protein interactions for RNA: ENST00000525064.5

CLNS1A-202, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3 BASIC

Gene CLNS1A, Length 1,121 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-202ENST00000525064 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.97□□□□□ -0.33
CLNS1A-202ENST00000525064 GRASPQ7Z6J2 395 aaPredicted RBP12.97□□□□□ -0.33
CLNS1A-202ENST00000525064 FLCNQ8NFG4 579 aa12.97□□□□□ -0.33
CLNS1A-202ENST00000525064 DDX27Q96GQ7 796 aaKnown RBP12.97□□□□□ -0.33
CLNS1A-202ENST00000525064 SNX27Q96L92 541 aa12.97□□□□□ -0.33
CLNS1A-202ENST00000525064 MRPL4Q9BYD3 311 aaKnown RBP12.97□□□□□ -0.33
CLNS1A-202ENST00000525064 MFSD1Q9H3U5 465 aa12.97□□□□□ -0.33
CLNS1A-202ENST00000525064 EPS15L1Q9UBC2 864 aa12.97□□□□□ -0.33
CLNS1A-202ENST00000525064 MTRRQ9UBK8 725 aa12.97□□□□□ -0.33
CLNS1A-202ENST00000525064 DPP7Q9UHL4 492 aa12.97□□□□□ -0.33
CLNS1A-202ENST00000525064 STK24Q9Y6E0 443 aa12.97□□□□□ -0.33
CLNS1A-202ENST00000525064 TSC2P49815 1807 aa12.97□□□□□ -0.33
CLNS1A-202ENST00000525064 KRBA1A5PL33 1030 aa12.96□□□□□ -0.33
CLNS1A-202ENST00000525064 B3GAT3O94766 335 aa12.96□□□□□ -0.33
CLNS1A-202ENST00000525064 C1RP00736 705 aa12.96□□□□□ -0.33
CLNS1A-202ENST00000525064 C8AP07357 584 aa12.96□□□□□ -0.33
CLNS1A-202ENST00000525064 CFHP08603 1231 aa12.96□□□□□ -0.33
CLNS1A-202ENST00000525064 GUCY2CP25092 1073 aa12.96□□□□□ -0.33
CLNS1A-202ENST00000525064 SLC12A3P55017 1021 aa12.96□□□□□ -0.33
CLNS1A-202ENST00000525064 TMEM119Q4V9L6 283 aa12.96□□□□□ -0.33
CLNS1A-202ENST00000525064 RILPL1Q5EBL4 403 aa12.96□□□□□ -0.33
CLNS1A-202ENST00000525064 SIX5Q8N196 739 aa12.96□□□□□ -0.33
CLNS1A-202ENST00000525064 STAMQ92783 540 aa12.96□□□□□ -0.33
CLNS1A-202ENST00000525064 C18orf25Q96B23 403 aaPredicted RBP12.96□□□□□ -0.33
CLNS1A-202ENST00000525064 DRC1Q96MC2 740 aa12.96□□□□□ -0.33
CLNS1A-202ENST00000525064 CCDC94Q9BW85 323 aaPredicted RBP12.96□□□□□ -0.33
CLNS1A-202ENST00000525064 HAPLN2Q9GZV7 340 aa12.96□□□□□ -0.33
CLNS1A-202ENST00000525064 HCFC1R1Q9NWW0 138 aa12.96□□□□□ -0.33
CLNS1A-202ENST00000525064 IGSF9Q9P2J2 1179 aa12.96□□□□□ -0.33
CLNS1A-202ENST00000525064 DMDP11532 3685 aa12.96□□□□□ -0.34
CLNS1A-202ENST00000525064 CFAP54Q96N23 3096 aa12.95□□□□□ -0.34
CLNS1A-202ENST00000525064 H3BQV1 296 aa12.95□□□□□ -0.34
CLNS1A-202ENST00000525064 PLA2G4BP0C869 781 aa12.95□□□□□ -0.34
CLNS1A-202ENST00000525064 MCF2P10911 925 aa12.95□□□□□ -0.34
CLNS1A-202ENST00000525064 LAMP2P13473 410 aa12.95□□□□□ -0.34
CLNS1A-202ENST00000525064 OR1D2P34982 312 aa12.95□□□□□ -0.34
CLNS1A-202ENST00000525064 GRIN1Q05586 938 aa12.95□□□□□ -0.34
CLNS1A-202ENST00000525064 ELAVL2Q12926 359 aaKnown RBP12.95□□□□□ -0.34
CLNS1A-202ENST00000525064 HTR4Q13639 388 aa12.95□□□□□ -0.34
CLNS1A-202ENST00000525064 PPM1LQ5SGD2 360 aa12.95□□□□□ -0.34
CLNS1A-202ENST00000525064 LIN9Q5TKA1 542 aa12.95□□□□□ -0.34
CLNS1A-202ENST00000525064 DCLRE1AQ6PJP8 1040 aa12.95□□□□□ -0.34
CLNS1A-202ENST00000525064 MPZL3Q6UWV2 235 aa12.95□□□□□ -0.34
CLNS1A-202ENST00000525064 SLC44A3Q8N4M1 653 aa12.95□□□□□ -0.34
CLNS1A-202ENST00000525064 SYT2Q8N9I0 419 aaPredicted RBP12.95□□□□□ -0.34
CLNS1A-202ENST00000525064 TMEM161BQ8NDZ6 487 aa12.95□□□□□ -0.34
CLNS1A-202ENST00000525064 SLC7A14Q8TBB6 771 aa12.95□□□□□ -0.34
CLNS1A-202ENST00000525064 ATOH1Q92858 354 aaPredicted RBP12.95□□□□□ -0.34
CLNS1A-202ENST00000525064 RPP25Q9BUL9 199 aaKnown RBP12.95□□□□□ -0.34
CLNS1A-202ENST00000525064 FBXL21Q9UKT6 434 aa12.95□□□□□ -0.34
CLNS1A-202ENST00000525064 CA14Q9ULX7 337 aa12.95□□□□□ -0.34
CLNS1A-202ENST00000525064 KIF3AQ9Y496 699 aa12.95□□□□□ -0.34
CLNS1A-202ENST00000525064 CDY1Q9Y6F8 540 aa12.95□□□□□ -0.34
CLNS1A-202ENST00000525064 TCHHQ07283 1943 aa12.95□□□□□ -0.34
CLNS1A-202ENST00000525064 ANHXE9PGG2 379 aa12.94□□□□□ -0.34
CLNS1A-202ENST00000525064 PODXLO00592 558 aa12.94□□□□□ -0.34
CLNS1A-202ENST00000525064 MAPTP10636 758 aaKnown RBP12.94□□□□□ -0.34
CLNS1A-202ENST00000525064 PLS3P13797 630 aa12.94□□□□□ -0.34
CLNS1A-202ENST00000525064 KCNE1P15382 129 aa12.94□□□□□ -0.34
CLNS1A-202ENST00000525064 AOC1P19801 751 aa12.94□□□□□ -0.34
CLNS1A-202ENST00000525064 FSHRP23945 695 aa12.94□□□□□ -0.34
CLNS1A-202ENST00000525064 YARSP54577 528 aaKnown RBP12.94□□□□□ -0.34
CLNS1A-202ENST00000525064 RAB33AQ14088 237 aa12.94□□□□□ -0.34
CLNS1A-202ENST00000525064 ARSHQ5FYA8 562 aa12.94□□□□□ -0.34
CLNS1A-202ENST00000525064 AXDND1Q5T1B0 1012 aaPredicted RBP12.94□□□□□ -0.34
CLNS1A-202ENST00000525064 ITFG1Q8TB96 612 aa12.94□□□□□ -0.34
CLNS1A-202ENST00000525064 FGF14Q92915 247 aa12.94□□□□□ -0.34
CLNS1A-202ENST00000525064 UROC1Q96N76 676 aa12.94□□□□□ -0.34
CLNS1A-202ENST00000525064 TBC1D32Q96NH3 1257 aa12.94□□□□□ -0.34
CLNS1A-202ENST00000525064 ACAP3Q96P50 834 aa12.94□□□□□ -0.34
CLNS1A-202ENST00000525064 CNTN3Q9P232 1028 aa12.94□□□□□ -0.34
CLNS1A-202ENST00000525064 ANKFY1Q9P2R3 1169 aa12.94□□□□□ -0.34
CLNS1A-202ENST00000525064 POLIQ9UNA4 740 aa12.94□□□□□ -0.34
CLNS1A-202ENST00000525064 NUMBLQ9Y6R0 609 aa12.94□□□□□ -0.34
CLNS1A-202ENST00000525064 SCN1AP35498 2009 aa12.94□□□□□ -0.34
CLNS1A-202ENST00000525064 FANCMQ8IYD8 2048 aa12.94□□□□□ -0.34
CLNS1A-202ENST00000525064 PATJQ8NI35 1801 aa12.94□□□□□ -0.34
CLNS1A-202ENST00000525064 HNRNPA1P09651 372 aaKnown RBP eCLIP12.93□□□□□ -0.34
CLNS1A-202ENST00000525064 SRFP11831 508 aa12.93□□□□□ -0.34
CLNS1A-202ENST00000525064 HOXA9P31269 272 aa12.93□□□□□ -0.34
CLNS1A-202ENST00000525064 CLCN5P51795 746 aa12.93□□□□□ -0.34
CLNS1A-202ENST00000525064 NCKAP1LP55160 1127 aa12.93□□□□□ -0.34
CLNS1A-202ENST00000525064 NOLC1Q14978 699 aaKnown RBP eCLIP12.93□□□□□ -0.349e-7■■■□□ 16.9
CLNS1A-202ENST00000525064 SLC10A6Q3KNW5 377 aa12.93□□□□□ -0.34
CLNS1A-202ENST00000525064 PARM1Q6UWI2 310 aa12.93□□□□□ -0.34
CLNS1A-202ENST00000525064 APBB1IPQ7Z5R6 666 aaPredicted RBP12.93□□□□□ -0.34
CLNS1A-202ENST00000525064 GPR152Q8TDT2 470 aa12.93□□□□□ -0.34
CLNS1A-202ENST00000525064 SPIRE2Q8WWL2 714 aa12.93□□□□□ -0.34
CLNS1A-202ENST00000525064 NTPCRQ9BSD7 190 aaKnown RBP12.93□□□□□ -0.34
CLNS1A-202ENST00000525064 TCHPQ9BT92 498 aa12.93□□□□□ -0.34
CLNS1A-202ENST00000525064 TIPINQ9BVW5 301 aa12.93□□□□□ -0.34
CLNS1A-202ENST00000525064 C17orf75Q9HAS0 396 aa12.93□□□□□ -0.34
CLNS1A-202ENST00000525064 TOPORSQ9NS56 1045 aaPredicted RBP12.93□□□□□ -0.34
CLNS1A-202ENST00000525064 BLOC1S4Q9NUP1 217 aa12.93□□□□□ -0.34
CLNS1A-202ENST00000525064 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.93□□□□□ -0.34
CLNS1A-202ENST00000525064 DNMT3BQ9UBC3 853 aaKnown RBP12.93□□□□□ -0.34
CLNS1A-202ENST00000525064 TUBGCP4Q9UGJ1 667 aa12.93□□□□□ -0.34
CLNS1A-202ENST00000525064 SMC3Q9UQE7 1217 aa12.93□□□□□ -0.34
CLNS1A-202ENST00000525064 RBM19Q9Y4C8 960 aaKnown RBP12.93□□□□□ -0.34
CLNS1A-202ENST00000525064 WDR27A2RRH5 827 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms