RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 PLEKHA4Q9H4M7 779 aa20.29■□□□□ 0.84
CAPN1-203ENST00000525013 ZSCAN16Q9H4T2 348 aaPredicted RBP20.29■□□□□ 0.84
CAPN1-203ENST00000525013 PDCD11Q14690 1871 aaKnown RBP20.28■□□□□ 0.84
CAPN1-203ENST00000525013 MUC6Q6W4X9 2439 aa20.28■□□□□ 0.84
CAPN1-203ENST00000525013 DOCK6Q96HP0 2047 aa20.28■□□□□ 0.84
CAPN1-203ENST00000525013 TMEM221A6NGB7 291 aa20.28■□□□□ 0.84
CAPN1-203ENST00000525013 M0R296 226 aa20.28■□□□□ 0.84
CAPN1-203ENST00000525013 TRAPPC3O43617 180 aa20.28■□□□□ 0.84
CAPN1-203ENST00000525013 IGFBP6P24592 240 aaPredicted RBP20.28■□□□□ 0.84
CAPN1-203ENST00000525013 TXLNAP40222 546 aa20.28■□□□□ 0.84
CAPN1-203ENST00000525013 LIG4P49917 911 aa20.28■□□□□ 0.84
CAPN1-203ENST00000525013 SOX4Q06945 474 aaPredicted RBP20.28■□□□□ 0.84
CAPN1-203ENST00000525013 XKR4Q5GH76 650 aa20.28■□□□□ 0.84
CAPN1-203ENST00000525013 PDXDC1Q6P996 788 aa20.28■□□□□ 0.84
CAPN1-203ENST00000525013 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.28■□□□□ 0.84
CAPN1-203ENST00000525013 KREMEN2Q8NCW0 462 aa20.28■□□□□ 0.84
CAPN1-203ENST00000525013 LNX1Q8TBB1 728 aaPredicted RBP20.28■□□□□ 0.84
CAPN1-203ENST00000525013 HDAC7Q8WUI4 952 aa20.28■□□□□ 0.84
CAPN1-203ENST00000525013 ACSF2Q96CM8 615 aaPredicted RBP20.28■□□□□ 0.84
CAPN1-203ENST00000525013 DDX27Q96GQ7 796 aaKnown RBP20.28■□□□□ 0.84
CAPN1-203ENST00000525013 ZMAT2Q96NC0 199 aaKnown RBP20.28■□□□□ 0.84
CAPN1-203ENST00000525013 USP28Q96RU2 1077 aa20.28■□□□□ 0.84
CAPN1-203ENST00000525013 LIMD1Q9UGP4 676 aa20.28■□□□□ 0.84
CAPN1-203ENST00000525013 USTQ9Y2C2 406 aa20.28■□□□□ 0.84
CAPN1-203ENST00000525013 TMEM189-UBE2V1I3L0A0 370 aa20.27■□□□□ 0.84
CAPN1-203ENST00000525013 I3L4J1 428 aa20.27■□□□□ 0.84
CAPN1-203ENST00000525013 HNRNPDLO14979 420 aaKnown RBP20.27■□□□□ 0.84
CAPN1-203ENST00000525013 TRAK2O60296 914 aa20.27■□□□□ 0.84
CAPN1-203ENST00000525013 HSP90AA1P07900 732 aaKnown RBP20.27■□□□□ 0.84
CAPN1-203ENST00000525013 KCNE1P15382 129 aa20.27■□□□□ 0.84
CAPN1-203ENST00000525013 ZNF131P52739 623 aa20.27■□□□□ 0.84
CAPN1-203ENST00000525013 MCL1Q07820 350 aa20.27■□□□□ 0.84
CAPN1-203ENST00000525013 RRAGBQ5VZM2 374 aa20.27■□□□□ 0.84
CAPN1-203ENST00000525013 LILRA6Q6PI73 481 aa20.27■□□□□ 0.84
CAPN1-203ENST00000525013 OTOP3Q7RTS5 596 aa20.27■□□□□ 0.84
CAPN1-203ENST00000525013 HSCBQ8IWL3 235 aa20.27■□□□□ 0.84
CAPN1-203ENST00000525013 PLCD3Q8N3E9 789 aa20.27■□□□□ 0.84
CAPN1-203ENST00000525013 KRI1Q8N9T8 703 aaKnown RBP20.27■□□□□ 0.84
CAPN1-203ENST00000525013 SMG7Q92540 1137 aaKnown RBP20.27■□□□□ 0.84
CAPN1-203ENST00000525013 SNX21Q969T3 373 aa20.27■□□□□ 0.84
CAPN1-203ENST00000525013 C18orf25Q96B23 403 aaPredicted RBP20.27■□□□□ 0.84
CAPN1-203ENST00000525013 CLSTN3Q9BQT9 956 aa20.27■□□□□ 0.84
CAPN1-203ENST00000525013 PIDD1Q9HB75 910 aa20.27■□□□□ 0.84
CAPN1-203ENST00000525013 TBX20Q9UMR3 447 aa20.27■□□□□ 0.84
CAPN1-203ENST00000525013 GTF3C3Q9Y5Q9 886 aa20.27■□□□□ 0.84
CAPN1-203ENST00000525013 MYH15Q9Y2K3 1946 aa20.27■□□□□ 0.84
CAPN1-203ENST00000525013 PODXLO00592 558 aa20.26■□□□□ 0.83
CAPN1-203ENST00000525013 C1RP00736 705 aa20.26■□□□□ 0.83
CAPN1-203ENST00000525013 SCP2P22307 547 aa20.26■□□□□ 0.83
CAPN1-203ENST00000525013 FGFR3P22607 806 aa20.26■□□□□ 0.83
CAPN1-203ENST00000525013 BRCC3P46736 316 aa20.26■□□□□ 0.83
CAPN1-203ENST00000525013 SLC39A14Q15043 492 aa20.26■□□□□ 0.83
CAPN1-203ENST00000525013 SLC10A6Q3KNW5 377 aa20.26■□□□□ 0.83
CAPN1-203ENST00000525013 ZDHHC14Q8IZN3 488 aa20.26■□□□□ 0.83
CAPN1-203ENST00000525013 C3orf58Q8NDZ4 430 aa20.26■□□□□ 0.83
CAPN1-203ENST00000525013 PBXIP1Q96AQ6 731 aa20.26■□□□□ 0.83
CAPN1-203ENST00000525013 MFSD14AQ96MC6 490 aa20.26■□□□□ 0.83
CAPN1-203ENST00000525013 CNTN3Q9P232 1028 aa20.26■□□□□ 0.83
CAPN1-203ENST00000525013 STK17AQ9UEE5 414 aa20.26■□□□□ 0.83
CAPN1-203ENST00000525013 ZNF318Q5VUA4 2279 aa20.26■□□□□ 0.83
CAPN1-203ENST00000525013 ADAM12O43184 909 aa20.25■□□□□ 0.83
CAPN1-203ENST00000525013 ASGR2P07307 311 aa20.25■□□□□ 0.83
CAPN1-203ENST00000525013 CLTAP09496 248 aa20.25■□□□□ 0.83
CAPN1-203ENST00000525013 CXCL8P10145 99 aa20.25■□□□□ 0.83
CAPN1-203ENST00000525013 TKTP29401 623 aaKnown RBP20.25■□□□□ 0.83
CAPN1-203ENST00000525013 NMT1P30419 496 aaKnown RBP20.25■□□□□ 0.83
CAPN1-203ENST00000525013 SIGLEC14Q08ET2 396 aa20.25■□□□□ 0.83
CAPN1-203ENST00000525013 STK38Q15208 465 aa20.25■□□□□ 0.83
CAPN1-203ENST00000525013 FOXD4L5Q5VV16 416 aaPredicted RBP20.25■□□□□ 0.83
CAPN1-203ENST00000525013 CD300LGQ6UXG3 332 aa20.25■□□□□ 0.83
CAPN1-203ENST00000525013 CYP26C1Q6V0L0 522 aa20.25■□□□□ 0.83
CAPN1-203ENST00000525013 DYMQ7RTS9 669 aa20.25■□□□□ 0.83
CAPN1-203ENST00000525013 FOXD4L4Q8WXT5 416 aaPredicted RBP20.25■□□□□ 0.83
CAPN1-203ENST00000525013 PANK2Q9BZ23 570 aa20.25■□□□□ 0.83
CAPN1-203ENST00000525013 HAPLN2Q9GZV7 340 aa20.25■□□□□ 0.83
CAPN1-203ENST00000525013 SORCS3Q9UPU3 1222 aa20.25■□□□□ 0.83
CAPN1-203ENST00000525013 NUB1Q9Y5A7 615 aa20.25■□□□□ 0.83
CAPN1-203ENST00000525013 MEFVO15553 781 aaPredicted RBP20.24■□□□□ 0.83
CAPN1-203ENST00000525013 RPL9P32969 192 aaKnown RBP20.24■□□□□ 0.83
CAPN1-203ENST00000525013 OR1D2P34982 312 aa20.24■□□□□ 0.83
CAPN1-203ENST00000525013 MTMR3Q13615 1198 aa20.24■□□□□ 0.83
CAPN1-203ENST00000525013 LIN9Q5TKA1 542 aa20.24■□□□□ 0.83
CAPN1-203ENST00000525013 SV2BQ7L1I2 683 aa20.24■□□□□ 0.83
CAPN1-203ENST00000525013 STAMQ92783 540 aa20.24■□□□□ 0.83
CAPN1-203ENST00000525013 ZNF707Q96C28 371 aaPredicted RBP20.24■□□□□ 0.83
CAPN1-203ENST00000525013 WDR6Q9NNW5 1121 aaKnown RBP20.24■□□□□ 0.83
CAPN1-203ENST00000525013 ZDHHC7Q9NXF8 308 aa20.24■□□□□ 0.83
CAPN1-203ENST00000525013 DOCK8Q8NF50 2099 aa20.23■□□□□ 0.83
CAPN1-203ENST00000525013 ZMYND10O75800 440 aa20.23■□□□□ 0.83
CAPN1-203ENST00000525013 GBP2P32456 591 aaPredicted RBP20.23■□□□□ 0.83
CAPN1-203ENST00000525013 ABCD1P33897 745 aa20.23■□□□□ 0.83
CAPN1-203ENST00000525013 SPAG1Q07617 926 aa20.23■□□□□ 0.83
CAPN1-203ENST00000525013 ZC2HC1CQ53FD0 456 aaPredicted RBP20.23■□□□□ 0.83
CAPN1-203ENST00000525013 CCDC73Q6ZRK6 1079 aa20.23■□□□□ 0.83
CAPN1-203ENST00000525013 KCNN1Q92952 543 aa20.23■□□□□ 0.83
CAPN1-203ENST00000525013 FAM122AQ96E09 287 aa20.23■□□□□ 0.83
CAPN1-203ENST00000525013 ZNF396Q96N95 335 aaPredicted RBP20.23■□□□□ 0.83
CAPN1-203ENST00000525013 MSTO1Q9BUK6 570 aa20.23■□□□□ 0.83
CAPN1-203ENST00000525013 RHOBTB2Q9BYZ6 727 aa20.23■□□□□ 0.83
CAPN1-203ENST00000525013 PRKD2Q9BZL6 878 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms