RNA–Protein interactions for RNA: ENST00000524797.1

TRAPPC4-204, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,924 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-204ENST00000524797 TBX20Q9UMR3 447 aa12.21□□□□□ -0.45
TRAPPC4-204ENST00000524797 TECTAO75443 2155 aa12.21□□□□□ -0.46
TRAPPC4-204ENST00000524797 PRR33A8MZF0 331 aa12.21□□□□□ -0.46
TRAPPC4-204ENST00000524797 C2CD4DB7Z1M9 353 aa12.21□□□□□ -0.46
TRAPPC4-204ENST00000524797 PIGRP01833 764 aa12.21□□□□□ -0.46
TRAPPC4-204ENST00000524797 DEKP35659 375 aaKnown RBP12.21□□□□□ -0.46
TRAPPC4-204ENST00000524797 TXLNAP40222 546 aa12.21□□□□□ -0.46
TRAPPC4-204ENST00000524797 PSMD5Q16401 504 aa12.21□□□□□ -0.46
TRAPPC4-204ENST00000524797 UPP1Q16831 310 aa12.21□□□□□ -0.46
TRAPPC4-204ENST00000524797 SEZ6Q53EL9 994 aa12.21□□□□□ -0.46
TRAPPC4-204ENST00000524797 RRAGBQ5VZM2 374 aa12.21□□□□□ -0.46
TRAPPC4-204ENST00000524797 LILRA6Q6PI73 481 aa12.21□□□□□ -0.46
TRAPPC4-204ENST00000524797 ELMSAN1Q6PJG2 1045 aa12.21□□□□□ -0.46
TRAPPC4-204ENST00000524797 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.21□□□□□ -0.46
TRAPPC4-204ENST00000524797 GLYCTKQ8IVS8 523 aa12.21□□□□□ -0.46
TRAPPC4-204ENST00000524797 KRI1Q8N9T8 703 aaKnown RBP12.21□□□□□ -0.46
TRAPPC4-204ENST00000524797 LNX1Q8TBB1 728 aaPredicted RBP12.21□□□□□ -0.46
TRAPPC4-204ENST00000524797 EDAQ92838 391 aa12.21□□□□□ -0.46
TRAPPC4-204ENST00000524797 FIZ1Q96SL8 496 aa12.21□□□□□ -0.46
TRAPPC4-204ENST00000524797 ZHX3Q9H4I2 956 aa12.21□□□□□ -0.46
TRAPPC4-204ENST00000524797 SLC38A7Q9NVC3 462 aa12.21□□□□□ -0.46
TRAPPC4-204ENST00000524797 CLDN3O15551 220 aa12.2□□□□□ -0.46
TRAPPC4-204ENST00000524797 TGM5O43548 720 aa12.2□□□□□ -0.46
TRAPPC4-204ENST00000524797 TRAK2O60296 914 aa12.2□□□□□ -0.46
TRAPPC4-204ENST00000524797 SPATA31D3P0C874 917 aa12.2□□□□□ -0.46
TRAPPC4-204ENST00000524797 FGFR3P22607 806 aa12.2□□□□□ -0.46
TRAPPC4-204ENST00000524797 NMT1P30419 496 aaKnown RBP12.2□□□□□ -0.46
TRAPPC4-204ENST00000524797 MATR3P43243 847 aaKnown RBP eCLIP12.2□□□□□ -0.46
TRAPPC4-204ENST00000524797 LIG4P49917 911 aa12.2□□□□□ -0.46
TRAPPC4-204ENST00000524797 ZXDAP98168 799 aa12.2□□□□□ -0.46
TRAPPC4-204ENST00000524797 STK38Q15208 465 aa12.2□□□□□ -0.46
TRAPPC4-204ENST00000524797 SLC10A6Q3KNW5 377 aa12.2□□□□□ -0.46
TRAPPC4-204ENST00000524797 SPATA31D4Q6ZUB0 917 aa12.2□□□□□ -0.46
TRAPPC4-204ENST00000524797 CEP57Q86XR8 500 aa12.2□□□□□ -0.46
TRAPPC4-204ENST00000524797 C3orf58Q8NDZ4 430 aa12.2□□□□□ -0.46
TRAPPC4-204ENST00000524797 DDX27Q96GQ7 796 aaKnown RBP12.2□□□□□ -0.46
TRAPPC4-204ENST00000524797 DPP7Q9UHL4 492 aa12.2□□□□□ -0.46
TRAPPC4-204ENST00000524797 DOCK6Q96HP0 2047 aa12.19□□□□□ -0.46
TRAPPC4-204ENST00000524797 PODXLO00592 558 aa12.19□□□□□ -0.46
TRAPPC4-204ENST00000524797 B3GAT3O94766 335 aa12.19□□□□□ -0.46
TRAPPC4-204ENST00000524797 PAPLNO95428 1278 aa12.19□□□□□ -0.46
TRAPPC4-204ENST00000524797 MYBP10242 640 aa12.19□□□□□ -0.46
TRAPPC4-204ENST00000524797 PTPN21Q16825 1174 aa12.19□□□□□ -0.46
TRAPPC4-204ENST00000524797 PDXDC1Q6P996 788 aa12.19□□□□□ -0.46
TRAPPC4-204ENST00000524797 C15orf39Q6ZRI6 1047 aa12.19□□□□□ -0.46
TRAPPC4-204ENST00000524797 DYMQ7RTS9 669 aa12.19□□□□□ -0.46
TRAPPC4-204ENST00000524797 ZDHHC14Q8IZN3 488 aa12.19□□□□□ -0.46
TRAPPC4-204ENST00000524797 C18orf25Q96B23 403 aaPredicted RBP12.19□□□□□ -0.46
TRAPPC4-204ENST00000524797 ZNF396Q96N95 335 aaPredicted RBP12.19□□□□□ -0.46
TRAPPC4-204ENST00000524797 CLSTN3Q9BQT9 956 aa12.19□□□□□ -0.46
TRAPPC4-204ENST00000524797 RHOBTB2Q9BYZ6 727 aa12.19□□□□□ -0.46
TRAPPC4-204ENST00000524797 PLEKHA4Q9H4M7 779 aa12.19□□□□□ -0.46
TRAPPC4-204ENST00000524797 DOCK8Q8NF50 2099 aa12.19□□□□□ -0.46
TRAPPC4-204ENST00000524797 A0A087X0B3 334 aa12.19□□□□□ -0.46
TRAPPC4-204ENST00000524797 CCDC195A0A1B0GUA6 201 aa12.19□□□□□ -0.46
TRAPPC4-204ENST00000524797 MYMKA6NI61 221 aa12.19□□□□□ -0.46
TRAPPC4-204ENST00000524797 I3L4J1 428 aa12.19□□□□□ -0.46
TRAPPC4-204ENST00000524797 CLTAP09496 248 aa12.19□□□□□ -0.46
TRAPPC4-204ENST00000524797 CXCL8P10145 99 aa12.19□□□□□ -0.46
TRAPPC4-204ENST00000524797 BRCC3P46736 316 aa12.19□□□□□ -0.46
TRAPPC4-204ENST00000524797 GTF2BQ00403 316 aa12.19□□□□□ -0.46
TRAPPC4-204ENST00000524797 FOXD4L5Q5VV16 416 aaPredicted RBP12.19□□□□□ -0.46
TRAPPC4-204ENST00000524797 SLC39A4Q6P5W5 647 aa12.19□□□□□ -0.46
TRAPPC4-204ENST00000524797 CYP26C1Q6V0L0 522 aa12.19□□□□□ -0.46
TRAPPC4-204ENST00000524797 CCDC73Q6ZRK6 1079 aa12.19□□□□□ -0.46
TRAPPC4-204ENST00000524797 SV2BQ7L1I2 683 aa12.19□□□□□ -0.46
TRAPPC4-204ENST00000524797 SFR1Q86XK3 245 aa12.19□□□□□ -0.46
TRAPPC4-204ENST00000524797 TDRD5Q8NAT2 981 aaKnown RBP12.19□□□□□ -0.46
TRAPPC4-204ENST00000524797 LINC00301Q8NCQ3 95 aa12.19□□□□□ -0.46
TRAPPC4-204ENST00000524797 KREMEN2Q8NCW0 462 aa12.19□□□□□ -0.46
TRAPPC4-204ENST00000524797 FOXD4L4Q8WXT5 416 aaPredicted RBP12.19□□□□□ -0.46
TRAPPC4-204ENST00000524797 TFIP11Q9UBB9 837 aaKnown RBP12.19□□□□□ -0.46
TRAPPC4-204ENST00000524797 FBXW11Q9UKB1 542 aa12.19□□□□□ -0.46
TRAPPC4-204ENST00000524797 KMT2EQ8IZD2 1858 aa12.18□□□□□ -0.46
TRAPPC4-204ENST00000524797 HNRNPDLO14979 420 aaKnown RBP12.18□□□□□ -0.46
TRAPPC4-204ENST00000524797 SPTLC2O15270 562 aa12.18□□□□□ -0.46
TRAPPC4-204ENST00000524797 ADAM12O43184 909 aa12.18□□□□□ -0.46
TRAPPC4-204ENST00000524797 RFPL2O75678 378 aa12.18□□□□□ -0.46
TRAPPC4-204ENST00000524797 TKTP29401 623 aaKnown RBP12.18□□□□□ -0.46
TRAPPC4-204ENST00000524797 RPL9P32969 192 aaKnown RBP12.18□□□□□ -0.46
TRAPPC4-204ENST00000524797 ABCD1P33897 745 aa12.18□□□□□ -0.46
TRAPPC4-204ENST00000524797 TNFSF9P41273 254 aa12.18□□□□□ -0.46
TRAPPC4-204ENST00000524797 STAT6P42226 847 aa12.18□□□□□ -0.46
TRAPPC4-204ENST00000524797 KYAT1Q16773 422 aa12.18□□□□□ -0.46
TRAPPC4-204ENST00000524797 ZBTB41Q5SVQ8 909 aa12.18□□□□□ -0.46
TRAPPC4-204ENST00000524797 CCDC149Q6ZUS6 474 aa12.18□□□□□ -0.46
TRAPPC4-204ENST00000524797 MAP4K3Q8IVH8 894 aa12.18□□□□□ -0.46
TRAPPC4-204ENST00000524797 DDX12PQ92771 950 aa12.18□□□□□ -0.46
TRAPPC4-204ENST00000524797 ZNF707Q96C28 371 aaPredicted RBP12.18□□□□□ -0.46
TRAPPC4-204ENST00000524797 DNAJC19Q96DA6 116 aa12.18□□□□□ -0.46
TRAPPC4-204ENST00000524797 ST6GALNAC4Q9H4F1 302 aa12.18□□□□□ -0.46
TRAPPC4-204ENST00000524797 PLEKHA5Q9HAU0 1116 aa12.18□□□□□ -0.46
TRAPPC4-204ENST00000524797 ZDHHC7Q9NXF8 308 aa12.18□□□□□ -0.46
TRAPPC4-204ENST00000524797 MTRRQ9UBK8 725 aa12.18□□□□□ -0.46
TRAPPC4-204ENST00000524797 TUBGCP4Q9UGJ1 667 aa12.18□□□□□ -0.46
TRAPPC4-204ENST00000524797 USTQ9Y2C2 406 aa12.18□□□□□ -0.46
TRAPPC4-204ENST00000524797 A0A0B4J269 797 aa12.17□□□□□ -0.46
TRAPPC4-204ENST00000524797 TTC26A0AVF1 554 aa12.17□□□□□ -0.46
TRAPPC4-204ENST00000524797 TMEM221A6NGB7 291 aa12.17□□□□□ -0.46
TRAPPC4-204ENST00000524797 ANKRD63C9JTQ0 380 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms