RNA–Protein interactions for RNA: ENST00000524162.5

TRAPPC9-215, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-215ENST00000524162 DZANK1Q9NVP4 752 aa22.8■■□□□ 1.24
TRAPPC9-215ENST00000524162 FNIP2Q9P278 1114 aa22.8■■□□□ 1.24
TRAPPC9-215ENST00000524162 USP25Q9UHP3 1055 aa22.8■■□□□ 1.24
TRAPPC9-215ENST00000524162 FAM237AA0A1B0GTK4 181 aa22.79■■□□□ 1.24
TRAPPC9-215ENST00000524162 TTC26A0AVF1 554 aa22.79■■□□□ 1.24
TRAPPC9-215ENST00000524162 POLR2DO15514 142 aaKnown RBP22.79■■□□□ 1.24
TRAPPC9-215ENST00000524162 ZC2HC1CQ53FD0 456 aaPredicted RBP22.79■■□□□ 1.24
TRAPPC9-215ENST00000524162 L1TD1Q5T7N2 865 aaKnown RBP22.79■■□□□ 1.24
TRAPPC9-215ENST00000524162 SLC39A4Q6P5W5 647 aa22.79■■□□□ 1.24
TRAPPC9-215ENST00000524162 DHX58Q96C10 678 aa22.79■■□□□ 1.24
TRAPPC9-215ENST00000524162 KLHL5Q96PQ7 755 aa22.79■■□□□ 1.24
TRAPPC9-215ENST00000524162 PAAF1Q9BRP4 392 aa22.79■■□□□ 1.24
TRAPPC9-215ENST00000524162 DPP7Q9UHL4 492 aa22.79■■□□□ 1.24
TRAPPC9-215ENST00000524162 KCNH3Q9ULD8 1083 aa22.79■■□□□ 1.24
TRAPPC9-215ENST00000524162 BARX2Q9UMQ3 279 aaPredicted RBP22.79■■□□□ 1.24
TRAPPC9-215ENST00000524162 CASTOR2A6NHX0 329 aa22.78■■□□□ 1.24
TRAPPC9-215ENST00000524162 TNFRSF10AO00220 468 aa22.78■■□□□ 1.24
TRAPPC9-215ENST00000524162 MEFVO15553 781 aaPredicted RBP22.78■■□□□ 1.24
TRAPPC9-215ENST00000524162 TRAPPC3O43617 180 aa22.78■■□□□ 1.24
TRAPPC9-215ENST00000524162 KIF4AO95239 1232 aa22.78■■□□□ 1.24
TRAPPC9-215ENST00000524162 ADH1AP07327 375 aa22.78■■□□□ 1.24
TRAPPC9-215ENST00000524162 CNPP09543 421 aaKnown RBP22.78■■□□□ 1.24
TRAPPC9-215ENST00000524162 IDEP14735 1019 aa22.78■■□□□ 1.24
TRAPPC9-215ENST00000524162 OSTNP61366 133 aa22.78■■□□□ 1.24
TRAPPC9-215ENST00000524162 ITIH3Q06033 890 aa22.78■■□□□ 1.24
TRAPPC9-215ENST00000524162 TPRNQ4KMQ1 711 aa22.78■■□□□ 1.24
TRAPPC9-215ENST00000524162 KIAA1841Q6NSI8 718 aa22.78■■□□□ 1.24
TRAPPC9-215ENST00000524162 STXBP4Q6ZWJ1 553 aa22.78■■□□□ 1.24
TRAPPC9-215ENST00000524162 HDAC7Q8WUI4 952 aa22.78■■□□□ 1.24
TRAPPC9-215ENST00000524162 SUSD6Q92537 303 aa22.78■■□□□ 1.24
TRAPPC9-215ENST00000524162 ZMAT2Q96NC0 199 aaKnown RBP22.78■■□□□ 1.24
TRAPPC9-215ENST00000524162 ACCSQ96QU6 501 aa22.78■■□□□ 1.24
TRAPPC9-215ENST00000524162 S1PR5Q9H228 398 aa22.78■■□□□ 1.24
TRAPPC9-215ENST00000524162 F8W810 466 aa22.77■■□□□ 1.24
TRAPPC9-215ENST00000524162 MYL1P05976 194 aa22.77■■□□□ 1.24
TRAPPC9-215ENST00000524162 SLFN14P0C7P3 912 aa22.77■■□□□ 1.24
TRAPPC9-215ENST00000524162 IL9P15248 144 aa22.77■■□□□ 1.24
TRAPPC9-215ENST00000524162 CYP3A5P20815 502 aa22.77■■□□□ 1.24
TRAPPC9-215ENST00000524162 MATR3P43243 847 aaKnown RBP eCLIP22.77■■□□□ 1.244e-7■■■■□ 25.8
TRAPPC9-215ENST00000524162 ZBTB6Q15916 424 aa22.77■■□□□ 1.24
TRAPPC9-215ENST00000524162 GLRA4Q5JXX5 417 aa22.77■■□□□ 1.24
TRAPPC9-215ENST00000524162 TAS1R1Q7RTX1 841 aa22.77■■□□□ 1.24
TRAPPC9-215ENST00000524162 AUTS2Q8WXX7 1259 aa22.77■■□□□ 1.24
TRAPPC9-215ENST00000524162 PIK3R5Q8WYR1 880 aa22.77■■□□□ 1.24
TRAPPC9-215ENST00000524162 POP1Q99575 1024 aaKnown RBP22.77■■□□□ 1.24
TRAPPC9-215ENST00000524162 MSTO1Q9BUK6 570 aa22.77■■□□□ 1.24
TRAPPC9-215ENST00000524162 TMEM206Q9H813 350 aa22.77■■□□□ 1.24
TRAPPC9-215ENST00000524162 CPSF3Q9UKF6 684 aaKnown RBP22.77■■□□□ 1.24
TRAPPC9-215ENST00000524162 PVALEFA0A1B0GWK0 134 aa22.76■■□□□ 1.23
TRAPPC9-215ENST00000524162 A0A1W2PQ27 194 aa22.76■■□□□ 1.23
TRAPPC9-215ENST00000524162 A0A1W2PQ64 194 aa22.76■■□□□ 1.23
TRAPPC9-215ENST00000524162 A0A1W2PQD8 194 aa22.76■■□□□ 1.23
TRAPPC9-215ENST00000524162 XPOTO43592 962 aaKnown RBP22.76■■□□□ 1.23
TRAPPC9-215ENST00000524162 B3GAT3O94766 335 aa22.76■■□□□ 1.23
TRAPPC9-215ENST00000524162 PAPLNO95428 1278 aa22.76■■□□□ 1.23
TRAPPC9-215ENST00000524162 CLCN4P51793 760 aa22.76■■□□□ 1.23
TRAPPC9-215ENST00000524162 CLCNKBP51801 687 aa22.76■■□□□ 1.23
TRAPPC9-215ENST00000524162 EHHADHQ08426 723 aa22.76■■□□□ 1.23
TRAPPC9-215ENST00000524162 SYCE2Q6PIF2 218 aa22.76■■□□□ 1.23
TRAPPC9-215ENST00000524162 ELMSAN1Q6PJG2 1045 aa22.76■■□□□ 1.23
TRAPPC9-215ENST00000524162 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.76■■□□□ 1.23
TRAPPC9-215ENST00000524162 ADHFE1Q8IWW8 467 aa22.76■■□□□ 1.23
TRAPPC9-215ENST00000524162 TTPALQ9BTX7 342 aa22.76■■□□□ 1.23
TRAPPC9-215ENST00000524162 RHOBTB2Q9BYZ6 727 aa22.76■■□□□ 1.23
TRAPPC9-215ENST00000524162 HPSEQ9Y251 543 aa22.76■■□□□ 1.23
TRAPPC9-215ENST00000524162 DERAQ9Y315 318 aa22.76■■□□□ 1.23
TRAPPC9-215ENST00000524162 PLXNA3P51805 1871 aa22.75■■□□□ 1.23
TRAPPC9-215ENST00000524162 C19orf67A6NJJ6 358 aa22.75■■□□□ 1.23
TRAPPC9-215ENST00000524162 KIAA0391O15091 583 aaKnown RBP22.75■■□□□ 1.23
TRAPPC9-215ENST00000524162 EIF3DO15371 548 aaKnown RBP eCLIP22.75■■□□□ 1.23
TRAPPC9-215ENST00000524162 TEX28O15482 410 aa22.75■■□□□ 1.23
TRAPPC9-215ENST00000524162 GCNT3O95395 438 aa22.75■■□□□ 1.23
TRAPPC9-215ENST00000524162 CXCL8P10145 99 aa22.75■■□□□ 1.23
TRAPPC9-215ENST00000524162 HARSP12081 509 aaKnown RBP22.75■■□□□ 1.23
TRAPPC9-215ENST00000524162 GARTP22102 1010 aa22.75■■□□□ 1.23
TRAPPC9-215ENST00000524162 PAX3P23760 479 aa22.75■■□□□ 1.23
TRAPPC9-215ENST00000524162 KLRC2P26717 231 aa22.75■■□□□ 1.23
TRAPPC9-215ENST00000524162 PPP2R3AQ06190 1150 aa22.75■■□□□ 1.23
TRAPPC9-215ENST00000524162 SOX4Q06945 474 aaPredicted RBP22.75■■□□□ 1.23
TRAPPC9-215ENST00000524162 ENOX2Q16206 610 aaKnown RBP22.75■■□□□ 1.23
TRAPPC9-215ENST00000524162 UNC13DQ70J99 1090 aa22.75■■□□□ 1.23
TRAPPC9-215ENST00000524162 ASB7Q9H672 318 aa22.75■■□□□ 1.23
TRAPPC9-215ENST00000524162 RPF1Q9H9Y2 349 aaKnown RBP22.75■■□□□ 1.23
TRAPPC9-215ENST00000524162 AGO2Q9UKV8 859 aaKnown RBP22.75■■□□□ 1.23
TRAPPC9-215ENST00000524162 UBQLN1Q9UMX0 589 aaKnown RBP22.75■■□□□ 1.23
TRAPPC9-215ENST00000524162 ANKRD63C9JTQ0 380 aa22.74■■□□□ 1.23
TRAPPC9-215ENST00000524162 FGFR3P22607 806 aa22.74■■□□□ 1.23
TRAPPC9-215ENST00000524162 LRPAP1P30533 357 aa22.74■■□□□ 1.23
TRAPPC9-215ENST00000524162 CA8P35219 290 aa22.74■■□□□ 1.23
TRAPPC9-215ENST00000524162 RBM10P98175 930 aaKnown RBP22.74■■□□□ 1.23
TRAPPC9-215ENST00000524162 ZP2Q05996 745 aa22.74■■□□□ 1.23
TRAPPC9-215ENST00000524162 CD300LGQ6UXG3 332 aa22.74■■□□□ 1.23
TRAPPC9-215ENST00000524162 CYP26C1Q6V0L0 522 aa22.74■■□□□ 1.23
TRAPPC9-215ENST00000524162 CEP57L1Q8IYX8 460 aa22.74■■□□□ 1.23
TRAPPC9-215ENST00000524162 NECTIN4Q96NY8 510 aa22.74■■□□□ 1.23
TRAPPC9-215ENST00000524162 ADAM7Q9H2U9 754 aa22.74■■□□□ 1.23
TRAPPC9-215ENST00000524162 USP15Q9Y4E8 981 aaPredicted RBP22.74■■□□□ 1.23
TRAPPC9-215ENST00000524162 LDHAP00338 332 aaKnown RBP22.73■■□□□ 1.23
TRAPPC9-215ENST00000524162 ADSSP30520 456 aa22.73■■□□□ 1.23
TRAPPC9-215ENST00000524162 TNFSF9P41273 254 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms