RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 SMARCA1P28370 1054 aa7.05□□□□□ -1.28
PABPC1-220ENST00000522658 MCM5P33992 734 aa7.05□□□□□ -1.28
PABPC1-220ENST00000522658 EIF1AXP47813 144 aaKnown RBP7.05□□□□□ -1.28
PABPC1-220ENST00000522658 ADCY7P51828 1080 aa7.05□□□□□ -1.28
PABPC1-220ENST00000522658 FGD1P98174 961 aa7.05□□□□□ -1.28
PABPC1-220ENST00000522658 APOBRQ0VD83 1088 aa7.05□□□□□ -1.28
PABPC1-220ENST00000522658 KIZQ2M2Z5 673 aa7.05□□□□□ -1.28
PABPC1-220ENST00000522658 SGO2Q562F6 1265 aa7.05□□□□□ -1.28
PABPC1-220ENST00000522658 MARCH8Q5T0T0 291 aa7.05□□□□□ -1.28
PABPC1-220ENST00000522658 TRMT1LQ7Z2T5 733 aaKnown RBP7.05□□□□□ -1.28
PABPC1-220ENST00000522658 SMC5Q8IY18 1101 aa7.05□□□□□ -1.28
PABPC1-220ENST00000522658 CCDC82Q8N4S0 544 aa7.05□□□□□ -1.28
PABPC1-220ENST00000522658 SMG8Q8ND04 991 aaKnown RBP7.05□□□□□ -1.28
PABPC1-220ENST00000522658 FLCNQ8NFG4 579 aa7.05□□□□□ -1.28
PABPC1-220ENST00000522658 KCNG4Q8TDN1 519 aa7.05□□□□□ -1.28
PABPC1-220ENST00000522658 ATP8B4Q8TF62 1192 aa7.05□□□□□ -1.28
PABPC1-220ENST00000522658 BSNDQ8WZ55 320 aa7.05□□□□□ -1.28
PABPC1-220ENST00000522658 ZBTB10Q96DT7 871 aa7.05□□□□□ -1.28
PABPC1-220ENST00000522658 TMEM87BQ96K49 555 aa7.05□□□□□ -1.28
PABPC1-220ENST00000522658 MXRA8Q9BRK3 442 aa7.05□□□□□ -1.28
PABPC1-220ENST00000522658 TMEM117Q9H0C3 514 aa7.05□□□□□ -1.28
PABPC1-220ENST00000522658 ZNF302Q9NR11 478 aa7.05□□□□□ -1.28
PABPC1-220ENST00000522658 KCNH7Q9NS40 1196 aa7.05□□□□□ -1.28
PABPC1-220ENST00000522658 TYW1Q9NV66 732 aaKnown RBP7.05□□□□□ -1.28
PABPC1-220ENST00000522658 RBM28Q9NW13 759 aaKnown RBP7.05□□□□□ -1.28
PABPC1-220ENST00000522658 SPG21Q9NZD8 308 aa7.05□□□□□ -1.28
PABPC1-220ENST00000522658 ADGRE2Q9UHX3 823 aa7.05□□□□□ -1.28
PABPC1-220ENST00000522658 NAP1L2Q9ULW6 460 aaPredicted RBP7.05□□□□□ -1.28
PABPC1-220ENST00000522658 ST3GAL5Q9UNP4 418 aa7.05□□□□□ -1.28
PABPC1-220ENST00000522658 UBIAD1Q9Y5Z9 338 aa7.05□□□□□ -1.28
PABPC1-220ENST00000522658 KIAA1671Q9BY89 1806 aa7.05□□□□□ -1.28
PABPC1-220ENST00000522658 ATG2AQ2TAZ0 1938 aa7.05□□□□□ -1.28
PABPC1-220ENST00000522658 RBAK-RBAKDNI3L0D1 243 aa7.04□□□□□ -1.28
PABPC1-220ENST00000522658 hCG_1984214I3L0E3 225 aa7.04□□□□□ -1.28
PABPC1-220ENST00000522658 EREGO14944 169 aa7.04□□□□□ -1.28
PABPC1-220ENST00000522658 PLEKHA8P1O95397 391 aa7.04□□□□□ -1.28
PABPC1-220ENST00000522658 DLGAP3O95886 979 aa7.04□□□□□ -1.28
PABPC1-220ENST00000522658 FGFR1P11362 822 aa7.04□□□□□ -1.28
PABPC1-220ENST00000522658 PCSK2P16519 638 aa7.04□□□□□ -1.28
PABPC1-220ENST00000522658 NPR3P17342 541 aa7.04□□□□□ -1.28
PABPC1-220ENST00000522658 ITGB5P18084 799 aa7.04□□□□□ -1.28
PABPC1-220ENST00000522658 ID4P47928 161 aa7.04□□□□□ -1.28
PABPC1-220ENST00000522658 ALDH7A1P49419 539 aaKnown RBP7.04□□□□□ -1.28
PABPC1-220ENST00000522658 ARL4DP49703 201 aa7.04□□□□□ -1.28
PABPC1-220ENST00000522658 CRYBB1P53674 252 aaPredicted RBP7.04□□□□□ -1.28
PABPC1-220ENST00000522658 SETQ01105 290 aaPredicted RBP7.04□□□□□ -1.28
PABPC1-220ENST00000522658 RNASELQ05823 741 aaKnown RBP7.04□□□□□ -1.28
PABPC1-220ENST00000522658 AP3B2Q13367 1082 aa7.04□□□□□ -1.28
PABPC1-220ENST00000522658 CAMK1Q14012 370 aa7.04□□□□□ -1.28
PABPC1-220ENST00000522658 GIT2Q14161 759 aa7.04□□□□□ -1.28
PABPC1-220ENST00000522658 NONOQ15233 471 aaKnown RBP eCLIP7.04□□□□□ -1.28
PABPC1-220ENST00000522658 C8orf34Q49A92 452 aa7.04□□□□□ -1.28
PABPC1-220ENST00000522658 CEP55Q53EZ4 464 aa7.04□□□□□ -1.28
PABPC1-220ENST00000522658 ZNF484Q5JVG2 852 aa7.04□□□□□ -1.28
PABPC1-220ENST00000522658 RARS2Q5T160 578 aaKnown RBP7.04□□□□□ -1.28
PABPC1-220ENST00000522658 FAM102BQ5T8I3 360 aa7.04□□□□□ -1.28
PABPC1-220ENST00000522658 KCNT2Q6UVM3 1135 aa7.04□□□□□ -1.28
PABPC1-220ENST00000522658 ERMP1Q7Z2K6 904 aa7.04□□□□□ -1.28
PABPC1-220ENST00000522658 CABP7Q86V35 215 aa7.04□□□□□ -1.28
PABPC1-220ENST00000522658 ZNF713Q8N859 430 aaPredicted RBP7.04□□□□□ -1.28
PABPC1-220ENST00000522658 RASGRP4Q8TDF6 673 aa7.04□□□□□ -1.28
PABPC1-220ENST00000522658 SUSD6Q92537 303 aa7.04□□□□□ -1.28
PABPC1-220ENST00000522658 ASIC4Q96FT7 647 aa7.04□□□□□ -1.28
PABPC1-220ENST00000522658 FAM167AQ96KS9 214 aa7.04□□□□□ -1.28
PABPC1-220ENST00000522658 MTA3Q9BTC8 594 aa7.04□□□□□ -1.28
PABPC1-220ENST00000522658 ANO3Q9BYT9 981 aa7.04□□□□□ -1.28
PABPC1-220ENST00000522658 SOX17Q9H6I2 414 aaPredicted RBP7.04□□□□□ -1.28
PABPC1-220ENST00000522658 ELAC1Q9H777 363 aaKnown RBP7.04□□□□□ -1.28
PABPC1-220ENST00000522658 LY9Q9HBG7 655 aa7.04□□□□□ -1.28
PABPC1-220ENST00000522658 ERVK-5Q9HDB9 667 aa7.04□□□□□ -1.28
PABPC1-220ENST00000522658 RGS18Q9NS28 235 aa7.04□□□□□ -1.28
PABPC1-220ENST00000522658 DACT1Q9NYF0 836 aa7.04□□□□□ -1.28
PABPC1-220ENST00000522658 NOC2LQ9Y3T9 749 aaKnown RBP7.04□□□□□ -1.28
PABPC1-220ENST00000522658 TELO2Q9Y4R8 837 aa7.04□□□□□ -1.28
PABPC1-220ENST00000522658 TTC3P53804 2025 aa7.04□□□□□ -1.28
PABPC1-220ENST00000522658 KMT2EQ8IZD2 1858 aa7.03□□□□□ -1.28
PABPC1-220ENST00000522658 PLXNA4Q9HCM2 1894 aa7.03□□□□□ -1.28
PABPC1-220ENST00000522658 LOC100289279A0A1B0GTE1 492 aa7.03□□□□□ -1.28
PABPC1-220ENST00000522658 hCG_1642624A0A1W2PR95 340 aa7.03□□□□□ -1.28
PABPC1-220ENST00000522658 PRR23AA6NEV1 266 aa7.03□□□□□ -1.28
PABPC1-220ENST00000522658 C2CD4DB7Z1M9 353 aa7.03□□□□□ -1.28
PABPC1-220ENST00000522658 MAGEB2O15479 319 aa7.03□□□□□ -1.28
PABPC1-220ENST00000522658 MGEA5O60502 916 aa7.03□□□□□ -1.28
PABPC1-220ENST00000522658 ZC3H11AO75152 810 aaKnown RBP eCLIP7.03□□□□□ -1.28
PABPC1-220ENST00000522658 TNFRSF21O75509 655 aa7.03□□□□□ -1.28
PABPC1-220ENST00000522658 VTNP04004 478 aa7.03□□□□□ -1.28
PABPC1-220ENST00000522658 F13BP05160 661 aa7.03□□□□□ -1.28
PABPC1-220ENST00000522658 RXRAP19793 462 aa7.03□□□□□ -1.28
PABPC1-220ENST00000522658 METAP2P50579 478 aaKnown RBP eCLIP7.03□□□□□ -1.283e-29■□□□□ 8.1
PABPC1-220ENST00000522658 ERVFC1P60507 584 aa7.03□□□□□ -1.28
PABPC1-220ENST00000522658 RBM10P98175 930 aaKnown RBP7.03□□□□□ -1.28
PABPC1-220ENST00000522658 PLCB3Q01970 1234 aa7.03□□□□□ -1.28
PABPC1-220ENST00000522658 MSMPQ1L6U9 139 aa7.03□□□□□ -1.28
PABPC1-220ENST00000522658 ATAT1Q5SQI0 421 aa7.03□□□□□ -1.28
PABPC1-220ENST00000522658 TTC22Q5TAA0 569 aa7.03□□□□□ -1.28
PABPC1-220ENST00000522658 ZC3H14Q6PJT7 736 aaKnown RBP7.03□□□□□ -1.28
PABPC1-220ENST00000522658 CCDC149Q6ZUS6 474 aa7.03□□□□□ -1.28
PABPC1-220ENST00000522658 PPFIBP1Q86W92 1011 aa7.03□□□□□ -1.28
PABPC1-220ENST00000522658 PLA2G4DQ86XP0 818 aa7.03□□□□□ -1.28
PABPC1-220ENST00000522658 RAB11FIP4Q86YS3 637 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms