RNA–Protein interactions for RNA: ENST00000521646.1

CSMD1-210, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 1,003 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-210ENST00000521646 INO80BQ9C086 356 aaPredicted RBP12.33□□□□□ -0.44
CSMD1-210ENST00000521646 MFSD1Q9H3U5 465 aa12.33□□□□□ -0.44
CSMD1-210ENST00000521646 ZFAND3Q9H8U3 227 aa12.33□□□□□ -0.44
CSMD1-210ENST00000521646 MRPL17Q9NRX2 175 aaKnown RBP12.33□□□□□ -0.44
CSMD1-210ENST00000521646 EPS15L1Q9UBC2 864 aa12.33□□□□□ -0.44
CSMD1-210ENST00000521646 CA14Q9ULX7 337 aa12.33□□□□□ -0.44
CSMD1-210ENST00000521646 MAP4K5Q9Y4K4 846 aa12.33□□□□□ -0.44
CSMD1-210ENST00000521646 R4GN57 208 aa12.33□□□□□ -0.44
CSMD1-210ENST00000521646 CNTNAP2Q9UHC6 1331 aa12.33□□□□□ -0.44
CSMD1-210ENST00000521646 SHISA7A6NL88 538 aa12.32□□□□□ -0.44
CSMD1-210ENST00000521646 CCNT1O60563 726 aaKnown RBP12.32□□□□□ -0.44
CSMD1-210ENST00000521646 DCNP07585 359 aaKnown RBP12.32□□□□□ -0.44
CSMD1-210ENST00000521646 ITGA4P13612 1032 aa12.32□□□□□ -0.44
CSMD1-210ENST00000521646 ARL2P36404 184 aa12.32□□□□□ -0.44
CSMD1-210ENST00000521646 GLUD2P49448 558 aa12.32□□□□□ -0.44
CSMD1-210ENST00000521646 HTR4Q13639 388 aa12.32□□□□□ -0.44
CSMD1-210ENST00000521646 NAB2Q15742 525 aa12.32□□□□□ -0.44
CSMD1-210ENST00000521646 XKR9Q5GH70 373 aa12.32□□□□□ -0.44
CSMD1-210ENST00000521646 PPFIBP1Q86W92 1011 aa12.32□□□□□ -0.44
CSMD1-210ENST00000521646 URGCPQ8TCY9 931 aa12.32□□□□□ -0.44
CSMD1-210ENST00000521646 HASPINQ8TF76 798 aa12.32□□□□□ -0.44
CSMD1-210ENST00000521646 BSNDQ8WZ55 320 aa12.32□□□□□ -0.44
CSMD1-210ENST00000521646 SMG7Q92540 1137 aaKnown RBP12.32□□□□□ -0.44
CSMD1-210ENST00000521646 PGBD4Q96DM1 585 aa12.32□□□□□ -0.44
CSMD1-210ENST00000521646 FAM20AQ96MK3 541 aa12.32□□□□□ -0.44
CSMD1-210ENST00000521646 EMILIN2Q9BXX0 1053 aa12.32□□□□□ -0.44
CSMD1-210ENST00000521646 FOXQ1Q9C009 403 aa12.32□□□□□ -0.44
CSMD1-210ENST00000521646 NT5C3AQ9H0P0 336 aa12.32□□□□□ -0.44
CSMD1-210ENST00000521646 CSRNP2Q9H175 543 aa12.32□□□□□ -0.44
CSMD1-210ENST00000521646 ZFHX4Q86UP3 3567 aa12.32□□□□□ -0.44
CSMD1-210ENST00000521646 ANHXE9PGG2 379 aa12.31□□□□□ -0.44
CSMD1-210ENST00000521646 PTGESO14684 152 aa12.31□□□□□ -0.44
CSMD1-210ENST00000521646 GLUD1P00367 558 aa12.31□□□□□ -0.44
CSMD1-210ENST00000521646 URODP06132 367 aa12.31□□□□□ -0.44
CSMD1-210ENST00000521646 PSMA5P28066 241 aa12.31□□□□□ -0.44
CSMD1-210ENST00000521646 MRPL14Q6P1L8 145 aaKnown RBP12.31□□□□□ -0.44
CSMD1-210ENST00000521646 FUT10Q6P4F1 479 aa12.31□□□□□ -0.44
CSMD1-210ENST00000521646 CD300LGQ6UXG3 332 aa12.31□□□□□ -0.44
CSMD1-210ENST00000521646 RSPO2Q6UXX9 243 aaPredicted RBP12.31□□□□□ -0.44
CSMD1-210ENST00000521646 TRIM22Q8IYM9 498 aa12.31□□□□□ -0.44
CSMD1-210ENST00000521646 PIGOQ8TEQ8 1089 aa12.31□□□□□ -0.44
CSMD1-210ENST00000521646 FGF14Q92915 247 aa12.31□□□□□ -0.44
CSMD1-210ENST00000521646 NKD2Q969F2 451 aaPredicted RBP12.31□□□□□ -0.44
CSMD1-210ENST00000521646 EIF2AK1Q9BQI3 630 aaKnown RBP12.31□□□□□ -0.44
CSMD1-210ENST00000521646 TMEM60Q9H2L4 133 aa12.31□□□□□ -0.44
CSMD1-210ENST00000521646 TBC1D17Q9HA65 648 aa12.31□□□□□ -0.44
CSMD1-210ENST00000521646 MTF2Q9Y483 593 aaPredicted RBP12.31□□□□□ -0.44
CSMD1-210ENST00000521646 INO80B-WBP1J3KQ70 363 aa12.3□□□□□ -0.44
CSMD1-210ENST00000521646 KIF4AO95239 1232 aa12.3□□□□□ -0.44
CSMD1-210ENST00000521646 NPTXRO95502 500 aa12.3□□□□□ -0.44
CSMD1-210ENST00000521646 SPATA31C1P0DKV0 1188 aa12.3□□□□□ -0.44
CSMD1-210ENST00000521646 LAMP2P13473 410 aa12.3□□□□□ -0.44
CSMD1-210ENST00000521646 GBP2P32456 591 aaPredicted RBP12.3□□□□□ -0.44
CSMD1-210ENST00000521646 RARRES1P49788 294 aa12.3□□□□□ -0.44
CSMD1-210ENST00000521646 PARM1Q6UWI2 310 aa12.3□□□□□ -0.44
CSMD1-210ENST00000521646 TREML4Q6UXN2 200 aa12.3□□□□□ -0.44
CSMD1-210ENST00000521646 GET4Q7L5D6 327 aaPredicted RBP12.3□□□□□ -0.44
CSMD1-210ENST00000521646 TPH2Q8IWU9 490 aa12.3□□□□□ -0.44
CSMD1-210ENST00000521646 TMEM130Q8N3G9 435 aa12.3□□□□□ -0.44
CSMD1-210ENST00000521646 NECAB1Q8N987 351 aa12.3□□□□□ -0.44
CSMD1-210ENST00000521646 TMEM87AQ8NBN3 555 aa12.3□□□□□ -0.44
CSMD1-210ENST00000521646 RSPH1Q8WYR4 309 aa12.3□□□□□ -0.44
CSMD1-210ENST00000521646 ACSF2Q96CM8 615 aaPredicted RBP12.3□□□□□ -0.44
CSMD1-210ENST00000521646 RMDN1Q96DB5 314 aa12.3□□□□□ -0.44
CSMD1-210ENST00000521646 FAM193BQ96PV7 902 aaPredicted RBP12.3□□□□□ -0.44
CSMD1-210ENST00000521646 CLSTN3Q9BQT9 956 aa12.3□□□□□ -0.44
CSMD1-210ENST00000521646 RHOBTB2Q9BYZ6 727 aa12.3□□□□□ -0.44
CSMD1-210ENST00000521646 C22orf23Q9BZE7 217 aa12.3□□□□□ -0.44
CSMD1-210ENST00000521646 TM6SF1Q9BZW5 370 aa12.3□□□□□ -0.44
CSMD1-210ENST00000521646 IRF2BPLQ9H1B7 796 aa12.3□□□□□ -0.44
CSMD1-210ENST00000521646 SLKQ9H2G2 1235 aaPredicted RBP12.3□□□□□ -0.44
CSMD1-210ENST00000521646 POLD4Q9HCU8 107 aa12.3□□□□□ -0.44
CSMD1-210ENST00000521646 WNT16Q9UBV4 365 aa12.3□□□□□ -0.44
CSMD1-210ENST00000521646 FBXL21Q9UKT6 434 aa12.3□□□□□ -0.44
CSMD1-210ENST00000521646 CYP46A1Q9Y6A2 500 aa12.3□□□□□ -0.44
CSMD1-210ENST00000521646 NUMBLQ9Y6R0 609 aa12.3□□□□□ -0.44
CSMD1-210ENST00000521646 PATJQ8NI35 1801 aa12.3□□□□□ -0.44
CSMD1-210ENST00000521646 TRIP11Q15643 1979 aa12.29□□□□□ -0.44
CSMD1-210ENST00000521646 A0A1B0GUA9 196 aa12.29□□□□□ -0.44
CSMD1-210ENST00000521646 CCDC194A0A1B0GVG4 234 aa12.29□□□□□ -0.44
CSMD1-210ENST00000521646 MED19A0JLT2 244 aaPredicted RBP12.29□□□□□ -0.44
CSMD1-210ENST00000521646 CASTOR2A6NHX0 329 aa12.29□□□□□ -0.44
CSMD1-210ENST00000521646 CPLX1O14810 134 aa12.29□□□□□ -0.44
CSMD1-210ENST00000521646 TBX3O15119 743 aa12.29□□□□□ -0.44
CSMD1-210ENST00000521646 PFKFB2O60825 505 aa12.29□□□□□ -0.44
CSMD1-210ENST00000521646 LYPLA2O95372 231 aa12.29□□□□□ -0.44
CSMD1-210ENST00000521646 ADH1AP07327 375 aa12.29□□□□□ -0.44
CSMD1-210ENST00000521646 SRFP11831 508 aa12.29□□□□□ -0.44
CSMD1-210ENST00000521646 SPECC1Q5M775 1068 aa12.29□□□□□ -0.44
CSMD1-210ENST00000521646 EEF1DP3Q658K8 133 aa12.29□□□□□ -0.44
CSMD1-210ENST00000521646 GALNT17Q6IS24 598 aa12.29□□□□□ -0.44
CSMD1-210ENST00000521646 NOTUMQ6P988 496 aa12.29□□□□□ -0.44
CSMD1-210ENST00000521646 MAEAQ7L5Y9 396 aa12.29□□□□□ -0.44
CSMD1-210ENST00000521646 DCLK2Q8N568 766 aa12.29□□□□□ -0.44
CSMD1-210ENST00000521646 ITFG1Q8TB96 612 aa12.29□□□□□ -0.44
CSMD1-210ENST00000521646 LNX1Q8TBB1 728 aaPredicted RBP12.29□□□□□ -0.44
CSMD1-210ENST00000521646 MTMR9Q96QG7 549 aa12.29□□□□□ -0.44
CSMD1-210ENST00000521646 JPH2Q9BR39 696 aaPredicted RBP12.29□□□□□ -0.44
CSMD1-210ENST00000521646 POLR3FQ9H1D9 316 aaPredicted RBP12.29□□□□□ -0.44
CSMD1-210ENST00000521646 ZSWIM4Q9H7M6 989 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms