RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 ZNF276Q8N554 614 aa4.31□□□□□ -1.72
VPS13B-209ENST00000521559 CLRN3Q8NCR9 226 aa4.31□□□□□ -1.72
VPS13B-209ENST00000521559 EAF2Q96CJ1 260 aaPredicted RBP4.31□□□□□ -1.72
VPS13B-209ENST00000521559 TOPORSQ9NS56 1045 aaPredicted RBP4.31□□□□□ -1.72
VPS13B-209ENST00000521559 EIF2B4Q9UI10 523 aaKnown RBP4.31□□□□□ -1.72
VPS13B-209ENST00000521559 ING1Q9UK53 422 aaPredicted RBP4.31□□□□□ -1.72
VPS13B-209ENST00000521559 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.31□□□□□ -1.72
VPS13B-209ENST00000521559 SORCS3Q9UPU3 1222 aa4.31□□□□□ -1.72
VPS13B-209ENST00000521559 SPHKAPQ2M3C7 1700 aa4.31□□□□□ -1.72
VPS13B-209ENST00000521559 ZNF142P52746 1687 aaPredicted RBP4.31□□□□□ -1.72
VPS13B-209ENST00000521559 NEXMIFQ5QGS0 1516 aa4.31□□□□□ -1.72
VPS13B-209ENST00000521559 MYOM2P54296 1465 aa4.3□□□□□ -1.72
VPS13B-209ENST00000521559 NRXN1Q9ULB1 1477 aa4.3□□□□□ -1.72
VPS13B-209ENST00000521559 PIK3C2GO75747 1445 aa4.3□□□□□ -1.72
VPS13B-209ENST00000521559 PRAG1Q86YV5 1406 aa4.3□□□□□ -1.72
VPS13B-209ENST00000521559 LRPPRCP42704 1394 aaKnown RBP4.3□□□□□ -1.72
VPS13B-209ENST00000521559 UBR1Q8IWV7 1749 aa4.3□□□□□ -1.72
VPS13B-209ENST00000521559 ZNF335Q9H4Z2 1342 aaPredicted RBP4.3□□□□□ -1.72
VPS13B-209ENST00000521559 KDM5AP29375 1690 aaKnown RBP4.3□□□□□ -1.72
VPS13B-209ENST00000521559 GOLGA8AA7E2F4 631 aa4.3□□□□□ -1.72
VPS13B-209ENST00000521559 DIRC3C9JPN6 131 aa4.3□□□□□ -1.72
VPS13B-209ENST00000521559 FAM20BO75063 409 aa4.3□□□□□ -1.72
VPS13B-209ENST00000521559 CRHR1P34998 444 aa4.3□□□□□ -1.72
VPS13B-209ENST00000521559 MRPS9P82933 396 aaKnown RBP4.3□□□□□ -1.72
VPS13B-209ENST00000521559 SLC25A3Q00325 362 aa4.3□□□□□ -1.72
VPS13B-209ENST00000521559 PDCD1Q15116 288 aa4.3□□□□□ -1.72
VPS13B-209ENST00000521559 C1QL3Q5VWW1 255 aa4.3□□□□□ -1.72
VPS13B-209ENST00000521559 IGFL4Q6B9Z1 124 aa4.3□□□□□ -1.72
VPS13B-209ENST00000521559 MRGPRGQ86SM5 289 aa4.3□□□□□ -1.72
VPS13B-209ENST00000521559 MSL3Q8N5Y2 521 aaKnown RBP4.3□□□□□ -1.72
VPS13B-209ENST00000521559 UBR7Q8N806 425 aa4.3□□□□□ -1.72
VPS13B-209ENST00000521559 OR52N2Q8NGI0 321 aa4.3□□□□□ -1.72
VPS13B-209ENST00000521559 CPT1CQ8TCG5 803 aa4.3□□□□□ -1.72
VPS13B-209ENST00000521559 ZNF480Q8WV37 535 aa4.3□□□□□ -1.72
VPS13B-209ENST00000521559 AUTS2Q8WXX7 1259 aa4.3□□□□□ -1.72
VPS13B-209ENST00000521559 FATE1Q969F0 183 aa4.3□□□□□ -1.72
VPS13B-209ENST00000521559 LENG9Q96B70 501 aa4.3□□□□□ -1.72
VPS13B-209ENST00000521559 CEP89Q96ST8 783 aa4.3□□□□□ -1.72
VPS13B-209ENST00000521559 GPRC5DQ9NZD1 345 aa4.3□□□□□ -1.72
VPS13B-209ENST00000521559 STK26Q9P289 416 aa4.3□□□□□ -1.72
VPS13B-209ENST00000521559 ZBTB21Q9ULJ3 1066 aa4.3□□□□□ -1.72
VPS13B-209ENST00000521559 FZD1Q9UP38 647 aa4.3□□□□□ -1.72
VPS13B-209ENST00000521559 PRKAB1Q9Y478 270 aa4.3□□□□□ -1.72
VPS13B-209ENST00000521559 ABCC11Q96J66 1382 aa4.29□□□□□ -1.72
VPS13B-209ENST00000521559 A0A087X1B8 175 aa4.29□□□□□ -1.72
VPS13B-209ENST00000521559 RPS6KA4O75676 772 aa4.29□□□□□ -1.72
VPS13B-209ENST00000521559 SCAF4O95104 1147 aaKnown RBP4.29□□□□□ -1.72
VPS13B-209ENST00000521559 ITGB1P05556 798 aa4.29□□□□□ -1.72
VPS13B-209ENST00000521559 CTSSP25774 331 aa4.29□□□□□ -1.72
VPS13B-209ENST00000521559 CNGA1P29973 690 aa4.29□□□□□ -1.72
VPS13B-209ENST00000521559 ZEB1P37275 1124 aaPredicted RBP4.29□□□□□ -1.72
VPS13B-209ENST00000521559 ID4P47928 161 aa4.29□□□□□ -1.72
VPS13B-209ENST00000521559 PTPAQ15257 358 aa4.29□□□□□ -1.72
VPS13B-209ENST00000521559 LY6G5CQ5SRR4 150 aa4.29□□□□□ -1.72
VPS13B-209ENST00000521559 EFCAB12Q6NXP0 572 aa4.29□□□□□ -1.72
VPS13B-209ENST00000521559 DRICH1Q6PGQ1 229 aaPredicted RBP4.29□□□□□ -1.72
VPS13B-209ENST00000521559 BTNL9Q6UXG8 535 aa4.29□□□□□ -1.72
VPS13B-209ENST00000521559 ABHD15Q6UXT9 468 aa4.29□□□□□ -1.72
VPS13B-209ENST00000521559 KRT26Q7Z3Y9 468 aa4.29□□□□□ -1.72
VPS13B-209ENST00000521559 LARP4BQ92615 738 aaKnown RBP4.29□□□□□ -1.72
VPS13B-209ENST00000521559 CHFRQ96EP1 664 aa4.29□□□□□ -1.72
VPS13B-209ENST00000521559 NDC1Q9BTX1 674 aa4.29□□□□□ -1.72
VPS13B-209ENST00000521559 SLC46A2Q9BY10 475 aa4.29□□□□□ -1.72
VPS13B-209ENST00000521559 KCNH6Q9H252 994 aa4.29□□□□□ -1.72
VPS13B-209ENST00000521559 SPON1Q9HCB6 807 aa4.29□□□□□ -1.72
VPS13B-209ENST00000521559 GPRC5BQ9NZH0 403 aa4.29□□□□□ -1.72
VPS13B-209ENST00000521559 DPP7Q9UHL4 492 aa4.29□□□□□ -1.72
VPS13B-209ENST00000521559 PTPRUQ92729 1446 aa4.29□□□□□ -1.72
VPS13B-209ENST00000521559 SETBP1Q9Y6X0 1596 aa4.28□□□□□ -1.72
VPS13B-209ENST00000521559 GAGE12BA1L429 117 aa4.28□□□□□ -1.72
VPS13B-209ENST00000521559 GAGE12HA6NDE8 117 aa4.28□□□□□ -1.72
VPS13B-209ENST00000521559 RAMP2O60895 175 aa4.28□□□□□ -1.72
VPS13B-209ENST00000521559 TMEM127O75204 238 aa4.28□□□□□ -1.72
VPS13B-209ENST00000521559 ITGA10O75578 1167 aa4.28□□□□□ -1.72
VPS13B-209ENST00000521559 SPATA31D3P0C874 917 aa4.28□□□□□ -1.72
VPS13B-209ENST00000521559 RBP3P10745 1247 aa4.28□□□□□ -1.72
VPS13B-209ENST00000521559 LAG3P18627 525 aa4.28□□□□□ -1.72
VPS13B-209ENST00000521559 STAT4Q14765 748 aa4.28□□□□□ -1.72
VPS13B-209ENST00000521559 ANO4Q32M45 955 aa4.28□□□□□ -1.72
VPS13B-209ENST00000521559 TIGD2Q4W5G0 525 aa4.28□□□□□ -1.72
VPS13B-209ENST00000521559 SPATA31D4Q6ZUB0 917 aa4.28□□□□□ -1.72
VPS13B-209ENST00000521559 GPRIN1Q7Z2K8 1008 aa4.28□□□□□ -1.72
VPS13B-209ENST00000521559 STRA8Q7Z7C7 330 aa4.28□□□□□ -1.72
VPS13B-209ENST00000521559 AFAP1L2Q8N4X5 818 aa4.28□□□□□ -1.72
VPS13B-209ENST00000521559 GPR156Q8NFN8 814 aa4.28□□□□□ -1.72
VPS13B-209ENST00000521559 ZFP28Q8NHY6 868 aa4.28□□□□□ -1.72
VPS13B-209ENST00000521559 LMBR1Q8WVP7 490 aa4.28□□□□□ -1.72
VPS13B-209ENST00000521559 MENTQ9BUN1 341 aa4.28□□□□□ -1.72
VPS13B-209ENST00000521559 LSM14BQ9BX40 385 aaKnown RBP4.28□□□□□ -1.72
VPS13B-209ENST00000521559 POGKQ9P215 609 aa4.28□□□□□ -1.72
VPS13B-209ENST00000521559 YTHDC2Q9H6S0 1430 aaKnown RBP4.28□□□□□ -1.72
VPS13B-209ENST00000521559 ALKQ9UM73 1620 aa4.28□□□□□ -1.72
VPS13B-209ENST00000521559 ROCK2O75116 1388 aaKnown RBP4.27□□□□□ -1.73
VPS13B-209ENST00000521559 GPRASP1Q5JY77 1395 aa4.27□□□□□ -1.73
VPS13B-209ENST00000521559 CFAP65Q6ZU64 1925 aaKnown RBP4.27□□□□□ -1.73
VPS13B-209ENST00000521559 TBKBP1A7MCY6 615 aa4.27□□□□□ -1.73
VPS13B-209ENST00000521559 GRXCR1A8MXD5 290 aa4.27□□□□□ -1.73
VPS13B-209ENST00000521559 RNASET2O00584 256 aaKnown RBP4.27□□□□□ -1.73
VPS13B-209ENST00000521559 AKR1B10O60218 316 aa4.27□□□□□ -1.73
VPS13B-209ENST00000521559 RHOBTB3O94955 611 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms