RNA–Protein interactions for RNA: ENST00000520991.3

CLN8-205, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5 BASIC

Gene CLN8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-205ENST00000520991 N4BP1O75113 896 aaKnown RBP17.32■□□□□ 0.36
CLN8-205ENST00000520991 TOM1L1O75674 476 aa17.32■□□□□ 0.36
CLN8-205ENST00000520991 PAPLNO95428 1278 aa17.32■□□□□ 0.36
CLN8-205ENST00000520991 MAPTP10636 758 aaKnown RBP17.32■□□□□ 0.36
CLN8-205ENST00000520991 FGFR3P22607 806 aa17.32■□□□□ 0.36
CLN8-205ENST00000520991 PROZP22891 400 aa17.32■□□□□ 0.36
CLN8-205ENST00000520991 MATR3P43243 847 aaKnown RBP eCLIP17.32■□□□□ 0.36
CLN8-205ENST00000520991 CACNB1Q02641 598 aaPredicted RBP17.32■□□□□ 0.36
CLN8-205ENST00000520991 NOLC1Q14978 699 aaKnown RBP eCLIP17.32■□□□□ 0.36
CLN8-205ENST00000520991 XKR4Q5GH76 650 aa17.32■□□□□ 0.36
CLN8-205ENST00000520991 PPM1LQ5SGD2 360 aa17.32■□□□□ 0.36
CLN8-205ENST00000520991 ALKAL1Q6UXT8 129 aa17.32■□□□□ 0.36
CLN8-205ENST00000520991 GET4Q7L5D6 327 aaPredicted RBP17.32■□□□□ 0.36
CLN8-205ENST00000520991 BICD1Q96G01 975 aa17.32■□□□□ 0.36
CLN8-205ENST00000520991 DDX27Q96GQ7 796 aaKnown RBP17.32■□□□□ 0.36
CLN8-205ENST00000520991 ZBTB45Q96K62 511 aaPredicted RBP17.32■□□□□ 0.36
CLN8-205ENST00000520991 IGSF9Q9P2J2 1179 aa17.32■□□□□ 0.36
CLN8-205ENST00000520991 H0YCG3 227 aa17.31■□□□□ 0.36
CLN8-205ENST00000520991 I3L4J1 428 aa17.31■□□□□ 0.36
CLN8-205ENST00000520991 PODXLO00592 558 aa17.31■□□□□ 0.36
CLN8-205ENST00000520991 ABLIM1O14639 778 aa17.31■□□□□ 0.36
CLN8-205ENST00000520991 ADAM12O43184 909 aa17.31■□□□□ 0.36
CLN8-205ENST00000520991 C8AP07357 584 aa17.31■□□□□ 0.36
CLN8-205ENST00000520991 HNRNPA1P09651 372 aaKnown RBP eCLIP17.31■□□□□ 0.36
CLN8-205ENST00000520991 KCNE1P15382 129 aa17.31■□□□□ 0.36
CLN8-205ENST00000520991 IGFBP6P24592 240 aaPredicted RBP17.31■□□□□ 0.36
CLN8-205ENST00000520991 TKTP29401 623 aaKnown RBP17.31■□□□□ 0.36
CLN8-205ENST00000520991 SOX4Q06945 474 aaPredicted RBP17.31■□□□□ 0.36
CLN8-205ENST00000520991 DHX8Q14562 1220 aaKnown RBP17.31■□□□□ 0.36
CLN8-205ENST00000520991 ZPBP2Q6X784 338 aa17.31■□□□□ 0.36
CLN8-205ENST00000520991 GPBP1Q86WP2 473 aa17.31■□□□□ 0.36
CLN8-205ENST00000520991 C3orf58Q8NDZ4 430 aa17.31■□□□□ 0.36
CLN8-205ENST00000520991 MYADMQ96S97 322 aa17.31■□□□□ 0.36
CLN8-205ENST00000520991 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.31■□□□□ 0.36
CLN8-205ENST00000520991 CNTN3Q9P232 1028 aa17.31■□□□□ 0.36
CLN8-205ENST00000520991 EPS15L1Q9UBC2 864 aa17.31■□□□□ 0.36
CLN8-205ENST00000520991 MTRRQ9UBK8 725 aa17.31■□□□□ 0.36
CLN8-205ENST00000520991 FBXL21Q9UKT6 434 aa17.31■□□□□ 0.36
CLN8-205ENST00000520991 ODF2LQ9ULJ1 636 aa17.31■□□□□ 0.36
CLN8-205ENST00000520991 DUSP12Q9UNI6 340 aa17.31■□□□□ 0.36
CLN8-205ENST00000520991 MYH11P35749 1972 aa17.31■□□□□ 0.36
CLN8-205ENST00000520991 CLDN3O15551 220 aa17.3■□□□□ 0.36
CLN8-205ENST00000520991 KRT18P05783 430 aaKnown RBP17.3■□□□□ 0.36
CLN8-205ENST00000520991 PDCP20941 246 aa17.3■□□□□ 0.36
CLN8-205ENST00000520991 OR1D2P34982 312 aa17.3■□□□□ 0.36
CLN8-205ENST00000520991 LONP1P36776 959 aaKnown RBP17.3■□□□□ 0.36
CLN8-205ENST00000520991 BRCC3P46736 316 aa17.3■□□□□ 0.36
CLN8-205ENST00000520991 MRE11P49959 708 aa17.3■□□□□ 0.36
CLN8-205ENST00000520991 CUL4AQ13619 759 aa17.3■□□□□ 0.36
CLN8-205ENST00000520991 RAB33AQ14088 237 aa17.3■□□□□ 0.36
CLN8-205ENST00000520991 SF3A1Q15459 793 aaKnown RBP17.3■□□□□ 0.36
CLN8-205ENST00000520991 ARSHQ5FYA8 562 aa17.3■□□□□ 0.36
CLN8-205ENST00000520991 ANKS3Q6ZW76 656 aa17.3■□□□□ 0.36
CLN8-205ENST00000520991 SLC7A14Q8TBB6 771 aa17.3■□□□□ 0.36
CLN8-205ENST00000520991 ZMAT2Q96NC0 199 aaKnown RBP17.3■□□□□ 0.36
CLN8-205ENST00000520991 POLIQ9UNA4 740 aa17.3■□□□□ 0.36
CLN8-205ENST00000520991 NUB1Q9Y5A7 615 aa17.3■□□□□ 0.36
CLN8-205ENST00000520991 CDY1Q9Y6F8 540 aa17.3■□□□□ 0.36
CLN8-205ENST00000520991 TRIP11Q15643 1979 aa17.3■□□□□ 0.36
CLN8-205ENST00000520991 VWA8A3KMH1 1905 aa17.3■□□□□ 0.36
CLN8-205ENST00000520991 CCL16O15467 120 aa17.29■□□□□ 0.36
CLN8-205ENST00000520991 XYLBO75191 536 aa17.29■□□□□ 0.36
CLN8-205ENST00000520991 FAM13AO94988 1023 aa17.29■□□□□ 0.36
CLN8-205ENST00000520991 PLCG1P19174 1290 aa17.29■□□□□ 0.36
CLN8-205ENST00000520991 FSHRP23945 695 aa17.29■□□□□ 0.36
CLN8-205ENST00000520991 NCKAP1LP55160 1127 aa17.29■□□□□ 0.36
CLN8-205ENST00000520991 MCL1Q07820 350 aa17.29■□□□□ 0.36
CLN8-205ENST00000520991 TCF15Q12870 199 aa17.29■□□□□ 0.36
CLN8-205ENST00000520991 KARSQ15046 597 aaKnown RBP17.29■□□□□ 0.36
CLN8-205ENST00000520991 SEZ6Q53EL9 994 aa17.29■□□□□ 0.36
CLN8-205ENST00000520991 AXDND1Q5T1B0 1012 aaPredicted RBP17.29■□□□□ 0.36
CLN8-205ENST00000520991 CD300LGQ6UXG3 332 aa17.29■□□□□ 0.36
CLN8-205ENST00000520991 GRASPQ7Z6J2 395 aaPredicted RBP17.29■□□□□ 0.36
CLN8-205ENST00000520991 C18orf25Q96B23 403 aaPredicted RBP17.29■□□□□ 0.36
CLN8-205ENST00000520991 REEP2Q9BRK0 252 aa17.29■□□□□ 0.36
CLN8-205ENST00000520991 BACE2Q9Y5Z0 518 aa17.29■□□□□ 0.36
CLN8-205ENST00000520991 K7ENM7 598 aa17.28■□□□□ 0.36
CLN8-205ENST00000520991 LAMP2P13473 410 aa17.28■□□□□ 0.36
CLN8-205ENST00000520991 HOXA9P31269 272 aa17.28■□□□□ 0.36
CLN8-205ENST00000520991 RPL9P32969 192 aaKnown RBP17.28■□□□□ 0.36
CLN8-205ENST00000520991 LIG4P49917 911 aa17.28■□□□□ 0.36
CLN8-205ENST00000520991 NUBP1P53384 320 aa17.28■□□□□ 0.36
CLN8-205ENST00000520991 GRIN1Q05586 938 aa17.28■□□□□ 0.36
CLN8-205ENST00000520991 ASTLQ6HA08 431 aaPredicted RBP17.28■□□□□ 0.36
CLN8-205ENST00000520991 HAUS6Q7Z4H7 955 aa17.28■□□□□ 0.36
CLN8-205ENST00000520991 MYCT1Q8N699 235 aa17.28■□□□□ 0.36
CLN8-205ENST00000520991 FLCNQ8NFG4 579 aa17.28■□□□□ 0.36
CLN8-205ENST00000520991 RSAD2Q8WXG1 361 aa17.28■□□□□ 0.36
CLN8-205ENST00000520991 RAD54LQ92698 747 aa17.28■□□□□ 0.36
CLN8-205ENST00000520991 NXPE3Q969Y0 559 aa17.28■□□□□ 0.36
CLN8-205ENST00000520991 ZHX3Q9H4I2 956 aa17.28■□□□□ 0.36
CLN8-205ENST00000520991 PARVGQ9HBI0 331 aa17.28■□□□□ 0.36
CLN8-205ENST00000520991 CITO14578 2027 aa17.28■□□□□ 0.36
CLN8-205ENST00000520991 PIEZO1Q92508 2521 aa17.27■□□□□ 0.36
CLN8-205ENST00000520991 HNRNPDLO14979 420 aaKnown RBP17.27■□□□□ 0.36
CLN8-205ENST00000520991 NARSO43776 548 aaKnown RBP17.27■□□□□ 0.36
CLN8-205ENST00000520991 TBCAO75347 108 aaKnown RBP17.27■□□□□ 0.36
CLN8-205ENST00000520991 CXCL8P10145 99 aa17.27■□□□□ 0.36
CLN8-205ENST00000520991 NTHL1P78549 312 aa17.27■□□□□ 0.36
CLN8-205ENST00000520991 MCM6Q14566 821 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms