RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 MRRFQ96E11 262 aaKnown RBP12.15□□□□□ -0.46
CLK4-206ENST00000520878 FARP2O94887 1054 aaPredicted RBP12.14□□□□□ -0.47
CLK4-206ENST00000520878 NFIL3Q16649 462 aa12.14□□□□□ -0.47
CLK4-206ENST00000520878 ALG3Q92685 438 aa12.14□□□□□ -0.47
CLK4-206ENST00000520878 HAUS1Q96CS2 278 aa12.14□□□□□ -0.47
CLK4-206ENST00000520878 FAM167AQ96KS9 214 aa12.14□□□□□ -0.47
CLK4-206ENST00000520878 PI4K2BG5E9Z4 385 aa12.14□□□□□ -0.47
CLK4-206ENST00000520878 IFNB1P01574 187 aa12.14□□□□□ -0.47
CLK4-206ENST00000520878 SLCO1A2P46721 670 aa12.14□□□□□ -0.47
CLK4-206ENST00000520878 PPATQ06203 517 aa12.14□□□□□ -0.47
CLK4-206ENST00000520878 LAMTOR4Q0VGL1 99 aa12.14□□□□□ -0.47
CLK4-206ENST00000520878 CAPSQ13938 189 aa12.14□□□□□ -0.47
CLK4-206ENST00000520878 ZNF699Q32M78 642 aa12.14□□□□□ -0.47
CLK4-206ENST00000520878 WDR72Q3MJ13 1102 aa12.14□□□□□ -0.47
CLK4-206ENST00000520878 FAM71AQ8IYT1 594 aa12.14□□□□□ -0.47
CLK4-206ENST00000520878 LRRC57Q8N9N7 239 aa12.14□□□□□ -0.47
CLK4-206ENST00000520878 C18orf8Q96DM3 657 aa12.14□□□□□ -0.47
CLK4-206ENST00000520878 FMO2Q99518 471 aa12.14□□□□□ -0.47
CLK4-206ENST00000520878 SELENOSQ9BQE4 189 aa12.14□□□□□ -0.47
CLK4-206ENST00000520878 RPF1Q9H9Y2 349 aaKnown RBP12.14□□□□□ -0.47
CLK4-206ENST00000520878 PCDHB2Q9Y5E7 798 aa12.14□□□□□ -0.47
CLK4-206ENST00000520878 MIF4GDA9UHW6 222 aaKnown RBP12.14□□□□□ -0.47
CLK4-206ENST00000520878 PIK3R2O00459 728 aa12.14□□□□□ -0.47
CLK4-206ENST00000520878 SLC25A27O95847 323 aa12.14□□□□□ -0.47
CLK4-206ENST00000520878 FMO1Q01740 532 aa12.14□□□□□ -0.47
CLK4-206ENST00000520878 DUOXA2Q1HG44 320 aa12.14□□□□□ -0.47
CLK4-206ENST00000520878 C1orf220Q5T0J3 134 aa12.14□□□□□ -0.47
CLK4-206ENST00000520878 TDRD10Q5VZ19 366 aaKnown RBP12.14□□□□□ -0.47
CLK4-206ENST00000520878 CCDC137Q6PK04 289 aaKnown RBP12.14□□□□□ -0.47
CLK4-206ENST00000520878 ZNF365Q70YC5 407 aa12.14□□□□□ -0.47
CLK4-206ENST00000520878 CEP120Q8N960 986 aa12.14□□□□□ -0.47
CLK4-206ENST00000520878 WHAMMQ8TF30 809 aa12.14□□□□□ -0.47
CLK4-206ENST00000520878 TCP11Q8WWU5 503 aa12.14□□□□□ -0.47
CLK4-206ENST00000520878 ANKRD36BP1Q96IX9 119 aa12.14□□□□□ -0.47
CLK4-206ENST00000520878 CAPS2Q9BXY5 557 aa12.14□□□□□ -0.47
CLK4-206ENST00000520878 TRIM7Q9C029 511 aa12.14□□□□□ -0.47
CLK4-206ENST00000520878 TLR3O15455 904 aaKnown RBP12.13□□□□□ -0.47
CLK4-206ENST00000520878 ATP4AP20648 1035 aa12.13□□□□□ -0.47
CLK4-206ENST00000520878 CYP2C19P33261 490 aa12.13□□□□□ -0.47
CLK4-206ENST00000520878 MYL6P60660 151 aa12.13□□□□□ -0.47
CLK4-206ENST00000520878 PDCLQ13371 301 aa12.13□□□□□ -0.47
CLK4-206ENST00000520878 TMEM63BQ5T3F8 832 aa12.13□□□□□ -0.47
CLK4-206ENST00000520878 LMO3Q8TAP4 145 aa12.13□□□□□ -0.47
CLK4-206ENST00000520878 AENQ8WTP8 325 aaKnown RBP12.13□□□□□ -0.47
CLK4-206ENST00000520878 SHC3Q92529 594 aa12.13□□□□□ -0.47
CLK4-206ENST00000520878 SYT17Q9BSW7 474 aa12.13□□□□□ -0.47
CLK4-206ENST00000520878 PPANQ9NQ55 473 aaKnown RBP12.13□□□□□ -0.47
CLK4-206ENST00000520878 RNF19AQ9NV58 838 aa12.13□□□□□ -0.47
CLK4-206ENST00000520878 NFASCO94856 1347 aa12.13□□□□□ -0.47
CLK4-206ENST00000520878 SYNGAP1Q96PV0 1343 aa12.13□□□□□ -0.47
CLK4-206ENST00000520878 A0A0A6YYK5 440 aaPredicted RBP12.13□□□□□ -0.47
CLK4-206ENST00000520878 ARIH2O95376 493 aa12.13□□□□□ -0.47
CLK4-206ENST00000520878 VTNP04004 478 aa12.13□□□□□ -0.47
CLK4-206ENST00000520878 ADCY8P40145 1251 aa12.13□□□□□ -0.47
CLK4-206ENST00000520878 RFC5P40937 340 aa12.13□□□□□ -0.47
CLK4-206ENST00000520878 GPC3P51654 580 aa12.13□□□□□ -0.47
CLK4-206ENST00000520878 SNAPC2Q13487 334 aa12.13□□□□□ -0.47
CLK4-206ENST00000520878 CUL2Q13617 745 aa12.13□□□□□ -0.47
CLK4-206ENST00000520878 ACAD10Q6JQN1 1059 aa12.13□□□□□ -0.47
CLK4-206ENST00000520878 SESTD1Q86VW0 696 aa12.13□□□□□ -0.47
CLK4-206ENST00000520878 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.13□□□□□ -0.47
CLK4-206ENST00000520878 ACTRT1Q8TDG2 376 aa12.13□□□□□ -0.47
CLK4-206ENST00000520878 SENP7Q9BQF6 1050 aa12.13□□□□□ -0.47
CLK4-206ENST00000520878 TRIM6Q9C030 488 aaPredicted RBP12.13□□□□□ -0.47
CLK4-206ENST00000520878 CCL15-CCL14A0A0B4J2E2 113 aa12.13□□□□□ -0.47
CLK4-206ENST00000520878 GOLGA8KD6RF30 607 aa12.13□□□□□ -0.47
CLK4-206ENST00000520878 ADCY3O60266 1144 aa12.13□□□□□ -0.47
CLK4-206ENST00000520878 ZNF286BP0CG31 522 aa12.13□□□□□ -0.47
CLK4-206ENST00000520878 PYGMP11217 842 aa12.13□□□□□ -0.47
CLK4-206ENST00000520878 BRD2P25440 801 aaKnown RBP12.13□□□□□ -0.47
CLK4-206ENST00000520878 DYNLT1P63172 113 aa12.13□□□□□ -0.47
CLK4-206ENST00000520878 CCL15Q16663 113 aa12.13□□□□□ -0.47
CLK4-206ENST00000520878 IER5Q5VY09 327 aa12.13□□□□□ -0.47
CLK4-206ENST00000520878 C12orf56Q8IXR9 622 aa12.13□□□□□ -0.47
CLK4-206ENST00000520878 HELQQ8TDG4 1101 aa12.13□□□□□ -0.47
CLK4-206ENST00000520878 ACSF2Q96CM8 615 aaPredicted RBP12.13□□□□□ -0.47
CLK4-206ENST00000520878 GPR88Q9GZN0 384 aa12.13□□□□□ -0.47
CLK4-206ENST00000520878 VIPAS39Q9H9C1 493 aa12.13□□□□□ -0.47
CLK4-206ENST00000520878 ARHGAP28Q9P2N2 729 aa12.13□□□□□ -0.47
CLK4-206ENST00000520878 AGTPBP1Q9UPW5 1226 aa12.13□□□□□ -0.47
CLK4-206ENST00000520878 GTF2H1P32780 548 aa12.12□□□□□ -0.47
CLK4-206ENST00000520878 ACTN2P35609 894 aa12.12□□□□□ -0.47
CLK4-206ENST00000520878 EFNA5P52803 228 aa12.12□□□□□ -0.47
CLK4-206ENST00000520878 ALS2CLQ60I27 953 aa12.12□□□□□ -0.47
CLK4-206ENST00000520878 CAPN12Q6ZSI9 719 aa12.12□□□□□ -0.47
CLK4-206ENST00000520878 BCAS4Q8TDM0 211 aa12.12□□□□□ -0.47
CLK4-206ENST00000520878 ATG4AQ8WYN0 398 aa12.12□□□□□ -0.47
CLK4-206ENST00000520878 ZNF516Q92618 1163 aa12.12□□□□□ -0.47
CLK4-206ENST00000520878 STRA6Q9BX79 667 aa12.12□□□□□ -0.47
CLK4-206ENST00000520878 CARD9Q9H257 536 aa12.12□□□□□ -0.47
CLK4-206ENST00000520878 SMARCAD1Q9H4L7 1026 aa12.12□□□□□ -0.47
CLK4-206ENST00000520878 FAM114A2Q9NRY5 505 aa12.12□□□□□ -0.47
CLK4-206ENST00000520878 GTF3C4Q9UKN8 822 aa12.12□□□□□ -0.47
CLK4-206ENST00000520878 LTBP3Q9NS15 1303 aa12.12□□□□□ -0.47
CLK4-206ENST00000520878 NDUFAB1O14561 156 aa12.12□□□□□ -0.47
CLK4-206ENST00000520878 CXCL11O14625 94 aa12.12□□□□□ -0.47
CLK4-206ENST00000520878 B4GALT5O43286 388 aa12.12□□□□□ -0.47
CLK4-206ENST00000520878 SYF2O95926 243 aaKnown RBP12.12□□□□□ -0.47
CLK4-206ENST00000520878 ITIH3Q06033 890 aa12.12□□□□□ -0.47
CLK4-206ENST00000520878 CUL1Q13616 776 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms